Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0386 ATGGCTTTTCTAACTCACATTAATTACTTGTTCATTGTTTTGCTTATATTTTGCAGTTTCTATTTGGGTCTAAGCTCTGTGAATGATACTATAACATCAACCAGATCCATCAGTGACCCTGAGACAATAAGCTCAAACAACAGTGACTTCAAGCTAGGATTCTTCAGCCCTGAAAATTCCACACATCGCTATGTAGCAATCTGGTATCTCTCTGAATCCTACGTTATATGGATAGCCAACAGAGACCAACCACTTAATGATTCATCTGGGGTGTTCAAAATTCACAAGGATGGAAACCTTGTAGTGTTGAATGGTCAAAATCATGTCATATGGTCAACAAATGTGTCAATTAATGGTACCAATTCAAGTGCTCAACTTGATGATTCAGGAAATTTGATCCTGCGTGATGACACAAGTGGAACAACAATATGGGACAGTTTCACACACCCTGCTGATGCTGCAGTCCCCCAAATGAAAATTGCAGCCAATAGGGTGACAGGTAAGAAAATTGAGTATGTGTCAAGGAAAAGTAGTTCTGATCCATCTTCTGGGTACTTCACTGGTAGCCTTGAGCGTTTGGATGCTCCAGAAGTGTTTTTTTGGTATAATAAAACTAGACCATATTGGAGAACTGGTCCATGGAATGGAAGGGTCTTCCTTGGTTCACCAAGGATGTTAACTGAGTATTTATATGGGTGGCGTTTGGATCATGATAATGATGGAACTGTTTATCTAACTTACAGTTTTGCAGACCCTTCTGCCTTTGGAATCCTGTCCTTGACCCCATATGGCACACTTAAATTGGTGAGGTTTTTGAACAAAAAGGAGTTTGTGACACTTGAGGTAGATCAAAATGAATGTGACATTTATGGTAAATGTGGGCCTTTAGGAAAATGTGATAATTCAAGCACACCAATTTGTAGCTGTTTAGAGGGGTTTGAGCCCAGGAATCCTGAGGAATGGAATAGGAAAAATTGGACTAGTGGGTGTGTGAGGAATGTACCATTGAATTGTGAAAAAATGAAAAATGGAAGTGAAGTGCAACAAGATGGGTTTGGGGTGTACTATAATATGAAAGTGCCTGACTTCGCTGAGAGATCAGATGGTAACCAAGACAAATGCGGAACAGATTGCTTAGCAAATTGCTCTTGCTTGGCATATGCATATGATCCTTATATTGGATGCATGTATTGGAGTAGAGACTTGATTGATTTGCAGAAATTTCCATACGGGGGTGTTGATCTCTTCATTCGTGTGCCATCACAACTTCTTGTTACCGGTAAAAAGGGAAGAGAATACAAGGCATTAATCATCGCCATTGCTGGGGCAATTGGAGCATTAACCATAGCTGTCACTGCTTATTTTTTGTGGCGGAAACGTACTACTCCTAAGCATAAAGGTAAAGTTCCTCAAAACTTGATTACCGAAAACCAAAGACAAATTAAACTAGATGAATTGCCACTATTTGATTTTGAAAAGCTAGCAACTGCTACAAACAACTTTCACTTCGGTAATATGCTTGGCAAGGGAGGTTTTGGTCCAGTATACAAGGGACAATTGGAAGATGGTCAAGAAATTGCTGTAAAAAGACTTTCAAAAGCATCTGGACAAGGATTAGAAGAATTCATGAATGAAGTAGTAGTGATTTCTAAACTTCAACATCGGAATCTTGTAAGACTTCTTGGTTGTTGTGTTGAACGAGATGAACAAATGTTGGTCTATGAGTTTATGCCAAATAAAAGTTTGGATTCGTTTCTCTTTGATCCACTGCAAAGGAAAGTTTTAAATTGGAGTAGGCGCTTCAACATTATTGAAGGAATTGCACGAGGTATACTTTATCTTCATAGAGACTCAAGACTAAGGATTATACACAGGGATCTTAAAGCAAGTAACATCTTACTAGATAGTGAGATGAATCCTAAAATATCAGACTTTGGTTTAGCCAGAATTGTTAGAGGTGGTGATGAAGATGAAGCTAACACAAGAAGAGTTGTTGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAGGGGCTTTTCTCAGAAAAATCAGATGTTTACAGCTTTGGAGTTTTATTGCTAGAGATTGTGAGTGGACGAAGAAATACAAGCTTTTATAACAATGAGCAATCGCTTAGCCTTGTTGGATTTGCATGGAAACTATGGAATGAAGGCAACATTATGTCTTTAATAGATTCAGAGATATGGGATCCAACGTTCGAAAGTAGTATGTTGAAATGCATACACATAGGACTTTTATGTGTGCAAGAACTTACAAGAGAAAGACCAACTATATCCACGGTGGTTTTGATGCTCATTAGTGAAATTACTCACCTTCCTCCTCCAAGGCAAGTTGCATTTGTTCAAAAGCAAAATTATCGAAGTTCAAAGTCTTCTCAAAATAGTCAATCTAGTTCAAATAATAATGTAACGCTCAGTGAAATCCAAGGTAGGTAA 2460 0.3837 MAFLTHINYLFIVLLIFCSFYLGLSSVNDTITSTRSISDPETISSNNSDFKLGFFSPENSTHRYVAIWYLSESYVIWIANRDQPLNDSSGVFKIHKDGNLVVLNGQNHVIWSTNVSINGTNSSAQLDDSGNLILRDDTSGTTIWDSFTHPADAAVPQMKIAANRVTGKKIEYVSRKSSSDPSSGYFTGSLERLDAPEVFFWYNKTRPYWRTGPWNGRVFLGSPRMLTEYLYGWRLDHDNDGTVYLTYSFADPSAFGILSLTPYGTLKLVRFLNKKEFVTLEVDQNECDIYGKCGPLGKCDNSSTPICSCLEGFEPRNPEEWNRKNWTSGCVRNVPLNCEKMKNGSEVQQDGFGVYYNMKVPDFAERSDGNQDKCGTDCLANCSCLAYAYDPYIGCMYWSRDLIDLQKFPYGGVDLFIRVPSQLLVTGKKGREYKALIIAIAGAIGALTIAVTAYFLWRKRTTPKHKGKVPQNLITENQRQIKLDELPLFDFEKLATATNNFHFGNMLGKGGFGPVYKGQLEDGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCVERDEQMLVYEFMPNKSLDSFLFDPLQRKVLNWSRRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDSEMNPKISDFGLARIVRGGDEDEANTRRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFYNNEQSLSLVGFAWKLWNEGNIMSLIDSEIWDPTFESSMLKCIHIGLLCVQELTRERPTISTVVLMLISEITHLPPPRQVAFVQKQNYRSSKSSQNSQSSSNNNVTLSEIQGR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0386 819 CDD PAN_AP_plant 334 420 - -
Apr10g0386 819 Gene3D - 24 149 IPR036426 -
Apr10g0386 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 818 - -
Apr10g0386 819 SUPERFAMILY Protein kinase-like (PK-like) 485 801 IPR011009 -
Apr10g0386 819 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Apr10g0386 819 Pfam D-mannose binding lectin 75 176 IPR001480 -
Apr10g0386 819 MobiDBLite consensus disorder prediction 796 819 - -
Apr10g0386 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 18 818 - -
Apr10g0386 819 Pfam S-locus glycoprotein domain 209 316 IPR000858 GO:0048544
Apr10g0386 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 216 IPR036426 -
Apr10g0386 819 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0386 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Apr10g0386 819 ProSiteProfiles PAN/Apple domain profile. 338 420 IPR003609 -
Apr10g0386 819 SMART blect_4 34 150 IPR001480 -
Apr10g0386 819 Pfam PAN-like domain 347 405 IPR003609 -
Apr10g0386 819 SMART serkin_6 501 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0386 819 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Apr10g0386 819 CDD B_lectin 34 150 IPR001480 -
Apr10g0386 819 SMART ntp_6 347 419 IPR003609 -
Apr10g0386 819 Gene3D Transferase(Phosphotransferase) domain 1 577 781 - -
Apr10g0386 819 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Apr10g0386 819 Pfam Protein tyrosine and serine/threonine kinase 502 770 IPR001245 GO:0004672|GO:0006468
Apr10g0386 819 CDD STKc_IRAK 507 773 - -
Apr10g0386 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0386 Apr-Chr10 9561952 9566557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0386 489 819 Receptor kinase-like Gene Family AT4G11530 56.509 9.97e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr10g0386 PK_Tyr_Ser-Thr 8.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0386 - - gmx:100811896 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0386 10 9561952 9566557 Apr10g0386 10 9561952 9566557 ECH