Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0372 ATGGAATTGAATTGGGTTTGGACGAGTGCTGCCACTTTGTTTGCATGCTACTTTTTTGTATGTAAATTTTTGAGGGGGTTGAATGGGTGGTATTATGATCTAAAATTAAGAAACAAACAGTACCCACTTCCTCCTGGTGATATGGGATGGCCTCTTTTTGGCAATATGTTGACATTCCTCAAGGACTTCTCATCTGGTCATGCAGATTCATTCATCAACAACCTTGTTTCCAGATACGGACGCACTGGGATCTACAAGACTCACTTGTTTCTGAATCCAAGCATCATTGTGTGTGCTCCTGAGACGTGCAAGCGAGTGTTGCAAGACGAAGAAAACTATAAGCATGGTTATCCAACGTCCACCCAAGAACTAACACGAAGTAGACCCTTCGAAGGTGTGGCTGGTGCAGAACACAAGCGTATAAGACGCCTAGTCACTGCTCCCATTGTGGGACAACACATGTTAGTGAAGTACCTAGAACGCATCGAGAACATTGTCATTAATTCGTTAGAAGAATTATCTACCATTAAGCACCCAGTTGAGCTTCTAACAGAGACCAAAAAGATTTCCTTTAAAGTCATCATTCACATTTTCTTGGGCTCTTACAATGAGGGCATCGTCACAAAAGTAGGAGATTTGTTCACTGTTTTGTTCGATGGCCTATTCTCTGTGCCCATAAACGCACCCGGTTTCACATTCAACAAAGCACTCAAGGCACGTAAGAAGCTGGTCAAAATCATTCAATCTGTCCTGGACGAAAGGAAGTTGATGATGAAAAAAGGTGAAATTGTAGATAAGAGAGATCTTGTGGATATTCTTTTGGATGTCGATGGAGAGAATGGTAAAAAATTGGAGGATGAGGATATTATTGACTTGTTATTAGCACTTGTATTTGCTGGTCATGAAACCACAGCAACTGGTATGATGTGGTCACTCATACATCTTACGCAGCATCCAGATATCATGAAAAAAGCCAAGGAAGAGCAAGAAGAAATTATGAAGATGAGACCGTCCTCACAAAAATATCTAAGTCTTCAAGAAATTAAACAAATGGTTTATCTTTCAAAGGTTATTAATGAAACATTGCGTCTGGCCAATATTCTCTTTTCAGCTTTTCGAGTGGCAACTGCTGACGTGAACATAAACGGTTATATCATACCGAAAGGATGGAAAGTGTTGGTTTGGCTAAGAGCTATTCATATGGATCCTGAATATCATTCAAATCCAGAAGAGTTTAATCCATCAAGATGGGATGGTTACAATGCTAAAGTAGGAGCCTTCCTTCCTTTCGGAACAGGATCTAGACTTTGTCCTGGAAGTGATCTAGCCAAACTTGAAATGTCCATTCTTTTGCATCACTTTCTTCTGAATTATAAGTTGGAGCAAATAAATTCAAAATGTCCTATTACTAACTTGCCAAACACCAAGCCCAAGGACAACTGTCTCGCTAAGGTGATCAAAGTCCCTTGTGCATAG 1476 0.4024 MELNWVWTSAATLFACYFFVCKFLRGLNGWYYDLKLRNKQYPLPPGDMGWPLFGNMLTFLKDFSSGHADSFINNLVSRYGRTGIYKTHLFLNPSIIVCAPETCKRVLQDEENYKHGYPTSTQELTRSRPFEGVAGAEHKRIRRLVTAPIVGQHMLVKYLERIENIVINSLEELSTIKHPVELLTETKKISFKVIIHIFLGSYNEGIVTKVGDLFTVLFDGLFSVPINAPGFTFNKALKARKKLVKIIQSVLDERKLMMKKGEIVDKRDLVDILLDVDGENGKKLEDEDIIDLLLALVFAGHETTATGMMWSLIHLTQHPDIMKKAKEEQEEIMKMRPSSQKYLSLQEIKQMVYLSKVINETLRLANILFSAFRVATADVNINGYIIPKGWKVLVWLRAIHMDPEYHSNPEEFNPSRWDGYNAKVGAFLPFGTGSRLCPGSDLAKLEMSILLHHFLLNYKLEQINSKCPITNLPNTKPKDNCLAKVIKVPCA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0372 491 Pfam Cytochrome P450 44 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 SUPERFAMILY Cytochrome P450 38 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Apr10g0372 491 Gene3D Cytochrome P450 34 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PANTHER CYTOCHROME P450 88D6 22 466 - -
Apr10g0372 491 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PANTHER CYTOCHROME P450 26 22 466 - -
Apr10g0372 491 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0372 491 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0372 Apr-Chr10 9202774 9205889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0372 18 488 Cytochrome P450 AT2G32440 48.941 2.66e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0372 K04123 K17875 ag:BAG68929 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0372 10 9202774 9205889 Apr10g0372 10 9202774 9205889 ECH