Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0334 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGCCAGCCTGCTAACACTAAGTTATCAAGCAACAAGACAGTCCGCAGGATTCGTGTTAGAGGTGGCAATGTGAAGTGGAGGGCACTGAGATTGGATACTGGAAATTACTCATGGGGAAGTGAAGCCGTAACTCGCAAGACTCGTATACTTGATGTGGTTTACAATGCCTCAAACAACGAGCTTGTGCGAACTCAGACCCTTGTCAAAAGTGCTATTGTCCAGGTTGATGCTGCTCCATTCAAACAGTGGTACCTTCAGCACTATGGTGTTGACATTGGTAGGAAAAAGAAAACTGCTGCCAAGAAGGAATCTGCCGAGGACGGTGAAGCTTCTGCTACTGCTGCTGCTGCTGCAGAAGAAGCCAAAAAGAGTAATCGTGTGCAGAGAAAACTGGAGAAGCGCCAGAAAGATCGTAAGCTTGATTCCCATATTGAGGAGCAGTTTGGTGGTGGGCGATTGCTGGCTTGCATTTCTTCTCGCCCTGGTCAATGTGGCAGAGCTGATGGCTACATTCTCGAAGGTAAGGAGTTGGAATTTTACATGAAGAAAATCCAGAGGAAGAAGGGGAAGGGCGCAGCTTGA 672 0.4807 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAKKESAEDGEASATAAAAAEEAKKSNRVQRKLEKRQKDRKLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0334 223 Pfam Ribosomal protein S8e 5 202 IPR022309 -
Apr10g0334 223 PANTHER 40S RIBOSOMAL PROTEIN S8 1 223 IPR001047 GO:0003735|GO:0005840|GO:0006412
Apr10g0334 223 TIGRFAM eS8: ribosomal protein eS8 1 204 IPR001047 GO:0003735|GO:0005840|GO:0006412
Apr10g0334 223 MobiDBLite consensus disorder prediction 1 41 - -
Apr10g0334 223 PANTHER 40S RIBOSOMAL PROTEIN S8 1 223 - -
Apr10g0334 223 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Apr10g0334 223 Gene3D - 32 118 - -
Apr10g0334 223 MobiDBLite consensus disorder prediction 11 26 - -
Apr10g0334 223 MobiDBLite consensus disorder prediction 152 172 - -
Apr10g0334 223 Gene3D - 119 218 - -
Apr10g0334 223 CDD Ribosomal_S8e_like 5 202 - -
Apr10g0334 223 MobiDBLite consensus disorder prediction 148 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0334 Apr-Chr10 8148448 8151126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0334 1 211 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.360 2.83e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0334 K02995 - gmx:100794937 392.504