Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0329 ATGTTTCGGTTTCTTTCACTTGGTTCAAATATTTTTCAGTCTTTCACCCGCGCAGCGGGTGTAGAAGCCTTGCAATTGTTCACGTCCACCACCTATTCGACCATTGGCATAACCAAACCCAAGGTTGAATTAGAAGATGCTAGACACAAATGGAACGATGCCACTGAAGTTTTGAGTAAATGGGGTTGTAGTGACACTGATTTGACGAGAATATTTACCCGTTGCCCCTCATTGCGCAATGCTGAGCCTTCTCAGGTTCAATCTAAACTGTGCTTGTTAAGTGATTTGGGTTTAGGCTCATCTGAACTTGTGAAGATTATTAATTGTAGGCCACAGTTTTTTAGGTCTCGGATTAGCCGTAATTTCGATGAGAGGATTGAGCATCTTATTTCGTTGTTTGAGTCAAAAGAGATGTTTCATAAGGCCATTGTGAGAAATCCTTCGCTGCTGCTAGTTGATGATCGATACAACTTTAAAGGTACGGTTGCAATGTATGAAAAGATGGGAGTTAAGAAGAGGGACTTGACTCAAATGCTGCTTTTGCGGCCAATGATTATTTTGAGGAGTTCGTTTGATGCTGAGAAGCTGGAGTATTTAGGAATGACGGGGCTTTCTGAGGATTCGAAGTTGTATAAGTATGTGGTGACATTGATAGGGGTATCTCGAGTGGAAACTATTCGCGAGAAGCTGGCAAATTTCGCAAAGTTTGGTATTTCTGAGAAGGAGTTATTTGAACTTGTGGGGAGGTCTCCATATATTTTGACATTGTCTACTGAGAAGGTTCAGAGGAACATGACTTTCATTTTGGGCACAATGAAGCTTGAGGCTAAGGTGGTCCTGAAGCAGCCAAATCTCTTGTATGCTAATCTGGATACTGTTTTGAAACCAAGGGTGCTTCTAGCATTGAAGTTGCAAGAGATGGATCCTACGTTGCGAATCATAGGATCCAAAATACTTAGTTCGCTGAGGATGCCAGAGCAGAGGTTTTTGAAGCAGTTTGTCAATTGCCATCCCAATGATATTGCCAATGAATTAATGGAATTCTATAGAAGTACCAAAGAGGTGAAAAGGTTGGCAGAGTGGTCGAAGAAGTCCTGTCATAGAGGATTCCCTTTCTGA 1119 0.4182 MFRFLSLGSNIFQSFTRAAGVEALQLFTSTTYSTIGITKPKVELEDARHKWNDATEVLSKWGCSDTDLTRIFTRCPSLRNAEPSQVQSKLCLLSDLGLGSSELVKIINCRPQFFRSRISRNFDERIEHLISLFESKEMFHKAIVRNPSLLLVDDRYNFKGTVAMYEKMGVKKRDLTQMLLLRPMIILRSSFDAEKLEYLGMTGLSEDSKLYKYVVTLIGVSRVETIREKLANFAKFGISEKELFELVGRSPYILTLSTEKVQRNMTFILGTMKLEAKVVLKQPNLLYANLDTVLKPRVLLALKLQEMDPTLRIIGSKILSSLRMPEQRFLKQFVNCHPNDIANELMEFYRSTKEVKRLAEWSKKSCHRGFPF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0329 372 Pfam mTERF 27 307 IPR003690 GO:0003690|GO:0006355
Apr10g0329 372 PANTHER CGI-12 PROTEIN-RELATED 21 372 IPR003690 GO:0003690|GO:0006355
Apr10g0329 372 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Apr10g0329 372 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Apr10g0329 372 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Apr10g0329 372 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Apr10g0329 372 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Apr10g0329 372 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Apr10g0329 372 Gene3D Transcription termination factor 3, mitochondrial 120 343 IPR038538 -
Apr10g0329 372 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 372 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr10g0329 mTERF 3.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0329 K15032 - gmx:100799629 513.842