Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0328 CATGCATACACATATATATACACATCAATGTCATCCTCCCATCATGAGTGGATCTACGAGGTCTTCATCAACTTCAGAGGGGAAGATGTTCGTAACAACTTCGTTCCTCATCTCTATGCTGGCCTTTCAAATGCAGGAATCCACACTTTCATTGATTACAAGCTTCACAAGGGAACAGAGTTAGGCCCAGAACTAATGCGAGCCATAGAAGGCTCTCGGATAGCATTGGTTGTCTTCTCCAGAACCTATGCCAAATCTAGGTGGTGTCTTAATGAGCTGGTGAAGATCATGGAGTGCCACACAAATTATGGCCAGGTTGTTGAACCTATATTTTACGATGTTGATCCTTCTGATGTGCGTAATCAGAAGGGTGCTTTTGGAAAATCTTTGGAAGAACTTGTACGAAATACATACTCCGGGATAGAGATGTTAGATGCGTGGGGCAAGTGGAAGAGAGCACTCTCTGAAGCTGCAGATTTGGTAGGTTGGGATATCAGGAATTGCAGGAATGAAGATGAACAAGTGAGAGATATCTTAAAGGATGTTTCGGAAAAATTGGGCCATACATTTTTGTCTGTTGCTAAATTTCCAGTTGGATTACAGTCCCGTAAGGAAGAAGTGATTGAGTTTATTGAAAATCAATTAACGGAAGGTTGTGTAGTGGGGATCTGGGGAATGGGAGGATTGGGTAAAACAACGACAGCAAAAGCCATCTATAATCAAATTTATCGCAGATTCATGAACAGAAGTTTCATTGAAAATATTAGAGAAAATTGCAAAACGGCTGACAAAGGGTATGCTTATTTACAAGGAAAACTTCTTTCAGATGTCCTAAAAACAAAGGTGGAGATACATAACGTTGCAATGGGGATAACTATGATCGAGGAAAGACTTTGTGGGAGTAGAACACTCATTGTACTTGATGATGTGGATGATTTTGATCAATTAAATTTCCTATGTGGAAACCTTGAATGGATAGGTTCAGGAAGTGTATTAATCGTTACAACCAGAAATATAAGAATGCTTGATTTCCTTAAAGCTAACCGTGTCTTTGAAATGAAGGAAATGGACGAAAATGAGTCCCTTGAGCTTTTTAGTTGGCATGCATTTAGGGAAGCAAAACCAACAAAAGAATTCACCGAGCTATCGATAAATATGGTTTCTTACTGTGGAGGACTACCACTGGCTCTTGAAGTTCTTGGATCTCATTTATTTAAAAGGAAAGAGGAACAGTGGAACAGAGTACTGTCAAAACTGAAAGAACGTACTCCCCAAAAGAAAGTTCAAGATATATTAAGAATAAGCTATGATGGTTTACAGAGTTACATGGAAAGGGAAATATTTCTTGACATATGTTGTTTCTTTATTGGTAAAGAAAGAACCTATGTTACAAAGATACTAAATGGCTGTGGACTACATGCTGATGATGGAATAGCAACCTTGATAGAAATGAGTCTCATCAAGGTTGAAAATGAAAACAAGCTTGCAATCCATGATCTGCTACGTGACATGGGAATAGAAATTATCCGTCAAAGTTCACCAAAGGAACCTGAGAAACGCAGTCGATTATGCATTCTGGAGGATGTCGTTGATGTGTTGACAGAACATAATGGAACAAAAGAAATTGAGGGATTGGCTTTGAAGTTGCAAACAAGTACAATTTGCTTCAACACCAAAGCATTTGAGAATATGAAGAGATTAAGACTTTTGCAACTTGATCATGTACAACTTTATGGAGATTATAAGTATCTTAACAAAAAGTTAAGATGGGTCTGTTGGCAAGGATTTCCTTCAGAATACATACCAATCGATCTTTATCAGGGAAATGCAGTTGCAATTGACTTAAAACGCAATAATCTTAAACTTGTATGGAAGGAGCCCCAGTTGCTGGAAAGGCTAAAATTTCTCAATCTTAGTCATTCCAATAATTTGAAAAGCACCCCTGACTTTTCGAAGTTACCAAGTCTTGAAAAGCTCATTCTCAAAGACTGTCCAAATTTGTGCATGGTACACCAGTCCATTGGAGATCTCCGCAATCTTGTTCTCTTAAATTTGAAAGATTGTATACGACTCAACAATCTCCCAAAAAGTATCTATAAGTTGCAATCTATAAAAACTCTCATCATTTCTGGTTGTTCAAAGATTGACAGGCTAGAAGAAGAGATAGTGCAAATGGGATCCTTGACAACTCTATATGCAGACAATACAGCTATTAAACAAGTGCCCTCTTTGATAGTAAAATCAAAAAGCATTGGATACATATCCATATGTGGATACAAAGGATTATCACGTAATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCTACAATTAATCCCCTATCTCAAATCCATCCACTTTGGGCTATGTCATCATCGTTAGTTTCCATGGATGTGCAAGCAAGCAATTTGAATGGTCTAGCTCCAACGCTTTGCATCCCGTCAAAACTTCGAAGTGTTTTGGTTCAATGTGATATGGAAATTCAGCTATCTAAAGAATTAAGAACAATTATGAATGACATATATGGTGCAAATTTTATTGAAGGAGTAGCATCTACATCACAAATCCCAGAGCATTCATTGAGGTGTAATTTGATTGCAATGGGAAGCTGCGGAGAGGTCTTCAATATCCTCAAGAAGAGCACACTAAAGGGATTGACAACTACCGAATCTTTGGATGCTTTTCTCCCTGGTGACAACTATCCTTATTGGTCGACCCATACGAGGGAAGGACATTCAGTGCCTTTCAGAGTGCCTGGGGGTAGTAATTGTTGCATGAAAGGAATTACTTTGTGTGTTGTTTATTCATCACCCCCGGAAATCACAGCAGATGAAAGCCTTGTTTGTGTCTTGATGGTTAATTACTCTAAGCAGACTATCCAGGTCTGCAAGCGAGACACAATAACTTCCTTTAATAATGAAGATTGGCAGGGTTTAACATCAAATCTAGGACCTGGTGACAATGTGGAAATTTTTGCAGTTTTTAGACCTGGTTTGACTGTTATGAAGACTGCCATCTATCTAATATATGATCAACCAATTGCTGTGAAAATAGAGCCATCAAGTACAGTGATCTTGCAACGATCACCTAATGGGAGAATGGAGCTATCAACTAATGTGACAATGGATCCATCACCTGAAGTGAATGAGCAGCCATCACCTCACATGGAAAATTCATCCTCGAAGCCAAAGAAAAAAATCCACACAAGACTAAGAAAGAGAATGGGAAAATGTTTATGCTTGAATAGAGATGTTATTCATGAATCAGAATAA 3276 0.3837 HAYTYIYTSMSSSHHEWIYEVFINFRGEDVRNNFVPHLYAGLSNAGIHTFIDYKLHKGTELGPELMRAIEGSRIALVVFSRTYAKSRWCLNELVKIMECHTNYGQVVEPIFYDVDPSDVRNQKGAFGKSLEELVRNTYSGIEMLDAWGKWKRALSEAADLVGWDIRNCRNEDEQVRDILKDVSEKLGHTFLSVAKFPVGLQSRKEEVIEFIENQLTEGCVVGIWGMGGLGKTTTAKAIYNQIYRRFMNRSFIENIRENCKTADKGYAYLQGKLLSDVLKTKVEIHNVAMGITMIEERLCGSRTLIVLDDVDDFDQLNFLCGNLEWIGSGSVLIVTTRNIRMLDFLKANRVFEMKEMDENESLELFSWHAFREAKPTKEFTELSINMVSYCGGLPLALEVLGSHLFKRKEEQWNRVLSKLKERTPQKKVQDILRISYDGLQSYMEREIFLDICCFFIGKERTYVTKILNGCGLHADDGIATLIEMSLIKVENENKLAIHDLLRDMGIEIIRQSSPKEPEKRSRLCILEDVVDVLTEHNGTKEIEGLALKLQTSTICFNTKAFENMKRLRLLQLDHVQLYGDYKYLNKKLRWVCWQGFPSEYIPIDLYQGNAVAIDLKRNNLKLVWKEPQLLERLKFLNLSHSNNLKSTPDFSKLPSLEKLILKDCPNLCMVHQSIGDLRNLVLLNLKDCIRLNNLPKSIYKLQSIKTLIISGCSKIDRLEEEIVQMGSLTTLYADNTAIKQVPSLIVKSKSIGYISICGYKGLSRNVFPSIIWSWMSPTINPLSQIHPLWAMSSSLVSMDVQASNLNGLAPTLCIPSKLRSVLVQCDMEIQLSKELRTIMNDIYGANFIEGVASTSQIPEHSLRCNLIAMGSCGEVFNILKKSTLKGLTTTESLDAFLPGDNYPYWSTHTREGHSVPFRVPGGSNCCMKGITLCVVYSSPPEITADESLVCVLMVNYSKQTIQVCKRDTITSFNNEDWQGLTSNLGPGDNVEIFAVFRPGLTVMKTAIYLIYDQPIAVKIEPSSTVILQRSPNGRMELSTNVTMDPSPEVNEQPSPHMENSSSKPKKKIHTRLRKRMGKCLCLNRDVIHESE* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0328 1091 Pfam TIR domain 19 192 IPR000157 GO:0007165
Apr10g0328 1091 MobiDBLite consensus disorder prediction 1036 1059 - -
Apr10g0328 1091 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1011 - -
Apr10g0328 1091 SMART till_3 18 160 IPR000157 GO:0007165
Apr10g0328 1091 Gene3D - 16 186 IPR035897 -
Apr10g0328 1091 PRINTS Disease resistance protein signature 220 235 - -
Apr10g0328 1091 PRINTS Disease resistance protein signature 297 311 - -
Apr10g0328 1091 PRINTS Disease resistance protein signature 390 404 - -
Apr10g0328 1091 PRINTS Disease resistance protein signature 628 644 - -
Apr10g0328 1091 SUPERFAMILY L domain-like 497 823 - -
Apr10g0328 1091 Pfam NB-ARC domain 203 437 IPR002182 GO:0043531
Apr10g0328 1091 ProSiteProfiles TIR domain profile. 17 186 IPR000157 GO:0007165
Apr10g0328 1091 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Apr10g0328 1091 Gene3D - 187 350 IPR027417 -
Apr10g0328 1091 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 451 IPR027417 -
Apr10g0328 1091 Gene3D Ribonuclease Inhibitor 542 842 IPR032675 -
Apr10g0328 1091 MobiDBLite consensus disorder prediction 1036 1069 - -
Apr10g0328 1091 Gene3D - 355 440 IPR042197 -
Apr10g0328 1091 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1011 IPR044974 GO:0006952
Apr10g0328 1091 ProSiteProfiles Leucine-rich repeat profile. 632 654 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0328 Apr-Chr10 7876041 7884217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0328 7 745 WRKY Transcription Factor Family AT4G12020 29.513 6.65e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0328 - - gmx:100815297 1225.31