Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0327 ATGGTTTCCTCAAAATCCAAAAGACAATGGAAATACGACGTGTTCATCAATTTCAGGGGAGAAGATACTCGAAAGTGCTTCGTTTCTCATCTCTATGCAGCCCTTGCCAATGCTGGCGTCAACACTTTCCTTGACGACGAGGAACTTCGAAAGGGAACAAATCTTGGAGCAGGACTAAGGCAAGCAATAGAAGGGTCTCAGATAGCTTTGGTTGTTTTCTCCAAAAACTACGCTTCATCTGGTTGGTGTCTTATCGAGCTCGACAAAATCATTCAATGCCGCAGAAGTTTTGGGCAAGTTGTTGTACCCATATTTTACGATGTTGAGCCTTCCGATGTACGGAATGTAAAGGGTGCTTTTGGGGAAGCTTTGGAAACACTTGCACGAAAACGGGGCAAGGATAGGGAAAGCTTTAAGGAATTGCCCCAGTGGAAGAGGGCACTCAATAAGGCTGCACATTTGTCTGGTTGGGATGTGAAGAGTTTCAGCAATGAAGCTACAGCAGTGAACAAAATTGTCAATGGTGTTTTGACAAAACTAGATGAAACATTTTTGTCCATTACCCAATTTCCTGTTGGTCTTGAATCTCGTGTAGAAGAAGTGATTGGGTTTATTCAAAATCAATCAAGCGAGGTTTGTACAGTGGGGATCTGGGGAATGGGAGGATTGGGTAAAACAACAGTAGCCAAAGCCATCTTCAATCAAATTTATCGCAATTTTGAGCATAGAAGTTTCATTGAAGATATTAGAGAAGTTTGTGAGAAAGATAGTAGAGGGCTTATTCGTTTACAAGAACAACTTTATTCAAATGTCCTAAAAATAAAGGCCAAGAAGATACCCAGCATTGCGTCAGGGACAAATTTGATTGAGAAAAAACTTCGTGGGGAAAGAGCACTCATTGTACTTGATGATATCAGCAAGTCTCAGCAAATAGAAGCCCTGTGTGGAAAACGCAAATGGATGGGTTTGGGAAGTGTATTAATTGTAACAACCAGAGATGTACGCATACTTAATTTACTTGAAGTTGACCATATCTATGAAATGAAGGAAATGGATGAAAATGAGTCCCTTATGCTTTTCAGTTGGCATGCCTTTAGAGAAACAAGTCCACACGAAGACTTCAGTGAATTGTCAAGAAATGTAGTTGCATACTGTGGTGGACTACCACTGGCTCTTGAAGTCCTTGGATGTCATTTGTTTAAAAGGATAGAAGAAGAATGGAAAAGTGTGTTATCAAAACTAGAGAAAATTCCAAATGATCAAATACAAGAGAAACTGAGAATAAGCTATGATGGTTTAGATGATATGGAAAAGAAAATATTTCTCGACATATGTTGTTTCTTCATAGGCAAGGACAGAGCCTATGTTACAGACATATTGAATGGTTGTGAGCTTCATCCTGGAATTGGAATAACAACCTTGATGGAAAGGAGCCTTATAAAGGTTGAGAAACATAACAAACTTGGAATGCATGACTTGCTACGTAACATGGGAAGAGAAATCATTCGTCAAAGTTCACCACAGGAACCTGAGAAGCGTAGTCGATTGTGGGCTCATGAGGATGTATGTGATGTATTGGCAGAACATACTGGTACCAAAGCTATTGAGGGCTTGGCTTTGAAGTCACAAACAACTAGTAGACTTTGCTTCAATACCCAAGCATTTGAGAATATGAAGAAACTAAGACTTTTGCAACTTGATCATATACAACTTGTTGGAGATTATGGGTCTTTTCCCAAACAATTGAGATTGGTCTATTGGCAAAGATTTCCTTTAGAACATATACCTAATGACTTTTACCAGAGAAATGTAGTTGCTATGGATCTAAAATACAGCAACGTTAAACTAGTATGGAAGGAGCCTCAGTTGCTGGATAAGTTAAAAATCCTCAATCTTAGTCATTCGAAGTATTTGACACACACTCCTGAATTTTCAAATCTACCAAATCTTGTGAAGCTGATTCTCAAAGATTGTTCTAGCTTGTCCAAGGTACATGAATCCATTGGAGATCTAAGTAATCTTGTTTTGATAAATTTCAAGAATTGTACAAGCCTTAGCAATCTCCCAAGGAGGATCTACAAGTTAAAATCTGTGAAAACTCTCATCCTTTCTGGTTGTTCAAAAATTGACAAATTGGAAGAAGAAATAGTGCAGATGGAATCCTTGACAACACTAATGGCAAAAGATACAGCCATAAAAGAAGTGCCCCATTCAATTGTAGGATCAAAAAGCATTGGATATGTGTCCCTTTGTGGATATGAAGGATTATCACGTGATGTATTTCCTTCGCTCATTTGGTCTTGGATGTCACCAACAATGAATTCCCTTGGTCATATTCACCCATTTTCAGGCATGTCATCATATATAACTTCCTTAGATTTGCAGAATAATAATTTGTGTGCTCTAGCCCTGTTGCTCAAAAGATTTTCCAATCTTCGATGTGTTTGGGTGCAATGTGGCTCTGAGGTTGAACTAACTCAAGAATTAAGAACAATTCTTGATATCCTATATGATGTAAATTTTACTAAATTAGAAACAGCAACACATGCATCACAAGTCTCTGATCTTTCATTGAAATCACTTTTGATTGGAATGGGAAGCTACGACAAATTCATCAATTATTTTACCAAGAGTATATCACAGGAATTAACTATCAATAGGTTTGCTGATCATATTCTCCCGGGCGACAATTATCCATATTGGTTAACCCATACAGGTGAAGGACATTCAGTGTATTTCAAAGTACCTAATGTTGGTGATTGTGACCTGAAGGGAATGACTCTGTGTATTATTTATTCGTCTACGCTAAAATATGTGATAGCTGAATTTCGAACAAGTGTCTTGATAATTAATTACACGAAGTGCACCATCCATATATGCAAGCAAGACCCAACAATTTCCTTTAATGACGAAGACTGGAAAGTCATAGCACGAAATCTAGCTCCTGGTAACAAAGTAGAAATTATTGTAGATGCTGAACCTGGATTCATGATCAAGAAGATAGCGGTCTATCTATTGTATGGTGAATCAATTGATGTGAGAAGTCATCCTTCCCCAAAGCTAAAGAAGATGCGTTTGTAA 3081 0.3814 MVSSKSKRQWKYDVFINFRGEDTRKCFVSHLYAALANAGVNTFLDDEELRKGTNLGAGLRQAIEGSQIALVVFSKNYASSGWCLIELDKIIQCRRSFGQVVVPIFYDVEPSDVRNVKGAFGEALETLARKRGKDRESFKELPQWKRALNKAAHLSGWDVKSFSNEATAVNKIVNGVLTKLDETFLSITQFPVGLESRVEEVIGFIQNQSSEVCTVGIWGMGGLGKTTVAKAIFNQIYRNFEHRSFIEDIREVCEKDSRGLIRLQEQLYSNVLKIKAKKIPSIASGTNLIEKKLRGERALIVLDDISKSQQIEALCGKRKWMGLGSVLIVTTRDVRILNLLEVDHIYEMKEMDENESLMLFSWHAFRETSPHEDFSELSRNVVAYCGGLPLALEVLGCHLFKRIEEEWKSVLSKLEKIPNDQIQEKLRISYDGLDDMEKKIFLDICCFFIGKDRAYVTDILNGCELHPGIGITTLMERSLIKVEKHNKLGMHDLLRNMGREIIRQSSPQEPEKRSRLWAHEDVCDVLAEHTGTKAIEGLALKSQTTSRLCFNTQAFENMKKLRLLQLDHIQLVGDYGSFPKQLRLVYWQRFPLEHIPNDFYQRNVVAMDLKYSNVKLVWKEPQLLDKLKILNLSHSKYLTHTPEFSNLPNLVKLILKDCSSLSKVHESIGDLSNLVLINFKNCTSLSNLPRRIYKLKSVKTLILSGCSKIDKLEEEIVQMESLTTLMAKDTAIKEVPHSIVGSKSIGYVSLCGYEGLSRDVFPSLIWSWMSPTMNSLGHIHPFSGMSSYITSLDLQNNNLCALALLLKRFSNLRCVWVQCGSEVELTQELRTILDILYDVNFTKLETATHASQVSDLSLKSLLIGMGSYDKFINYFTKSISQELTINRFADHILPGDNYPYWLTHTGEGHSVYFKVPNVGDCDLKGMTLCIIYSSTLKYVIAEFRTSVLIINYTKCTIHICKQDPTISFNDEDWKVIARNLAPGNKVEIIVDAEPGFMIKKIAVYLLYGESIDVRSHPSPKLKKMRL* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0327 1026 SUPERFAMILY L domain-like 490 819 - -
Apr10g0327 1026 Pfam TIR domain 11 187 IPR000157 GO:0007165
Apr10g0327 1026 Pfam NB-ARC domain 195 426 IPR002182 GO:0043531
Apr10g0327 1026 PRINTS Disease resistance protein signature 214 229 - -
Apr10g0327 1026 PRINTS Disease resistance protein signature 292 306 - -
Apr10g0327 1026 PRINTS Disease resistance protein signature 385 399 - -
Apr10g0327 1026 PRINTS Disease resistance protein signature 693 709 - -
Apr10g0327 1026 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 1005 - -
Apr10g0327 1026 SMART till_3 11 154 IPR000157 GO:0007165
Apr10g0327 1026 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 1005 IPR044974 GO:0006952
Apr10g0327 1026 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 157 IPR035897 -
Apr10g0327 1026 Gene3D Ribonuclease Inhibitor 527 863 IPR032675 -
Apr10g0327 1026 Gene3D - 185 345 IPR027417 -
Apr10g0327 1026 ProSiteProfiles TIR domain profile. 10 180 IPR000157 GO:0007165
Apr10g0327 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 444 IPR027417 -
Apr10g0327 1026 Gene3D - 5 184 IPR035897 -
Apr10g0327 1026 Gene3D - 350 434 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0327 Apr-Chr10 7844836 7853360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0327 12 739 WRKY Transcription Factor Family AT4G12020 30.174 2.88e-88 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0327 - - gmx:100815297 1248.03