Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0326 ATGGCTTTGGTTGGAGAAGCATTGCTCTCTGCTTCTGTACACGCCCTGGTTGAGAAGATTGTCTCCACTGAATTCAAAGATTTGTTTTGCAGGGAGGAATTCGATCCTTCAATTCTCAATAAGCTTAAAATCACATTGCTAACCCTTCGTGCAGTTCTGAATGATGCTGAGGAGCAGCAGATAAGGAATCCTGCAGTGCAAGAGTGGCTTCATGAGCTCAAAGATTCTGTCTATGATGTAGACAGCTTGTTGGATGAAATCTACACAAAGTCCTTGCAACGCAAGGTAGAAGCCAAGTCACAAAGTTTTAGTTATCAAGCGCGGAACTTCCTTTCTTACTCTTTCAAACAGTTTCGTGGGAGAATGAATTTTGAATTGCAAAACTTAATGCAAAGATTAGAGCATTTTGCAAAGGAGAAGGGTATACTTGGTTTGAAAGAAGGTGTATCTGGGAGTGTATGGAATGGAACAGTCACAACCTCGGTGGTTGATCAATCTATAATATATGGTAGAGATGGTGATATAGATAAACTAAGAGAATATTTGCTATCAGATGATGATTGTGATAACCATGTAGGAGTGATTACTATTGTAGGCATGGGAGGGCTAGGCAAAACAACACTTGCTCAGCTACTTTACAATGATCAAGAAGTGAAACAGCACTTTAGTTTGAAAGCATGGGCTTGTATCACCAACAATTTTGATGTTGTTAGGGTGACTAAGACGCTTCTTGAGTCTGTTAGTTTGAAGCCAGTTGTTACTAATAATCTTGATGCTCTACATGTTGAATTGCAGCAAAGTTTGAGTGGTAGGAAATTTTTGTTTGTATTAGATGATTTATGGGATACCTATAATGACTGGAATAGACTAAAAGCTATTCTTAGGTCCGGCGAAGTAGGAAGTAAGATCATTATCACAACACGCCAGGAAAATGTTGCCTTGGCAATGCATACTTTTCCCATCCACAATTTAATGCCACTGTCACACCAAGATTGTTGGGATCTGCTTGCCAAACATGCATTTGGAGCCAACCAGTCCAATAGAGATCCAAAGCTTGAAGAGATTGGGAGAGAAATTGCAGCCAAATGTGATGGTTTACCTCTTGCTGCAGAAGCTCTTGGGAGTCTTCTTCGAACCAAATTGTCTGAAAAGGATTGGAATAGAATTTTGAAAAGCAACATCTGGGATTTGCCCAATGACAAGGTACTGCTCCCTTTGCTATTGAGCTATTATTATTTGCCTCCTCCTTTAAAAGGATGTTTTGCCTATTGTTCAATTTTTCCAAAGAATTATGAGCTCAATAAGGAGATGTTAGTTAGATTATGGATGGCAGAAGGTTTAATTCAGTTTAGAAGTAATCAAAGTTTGGAAGAGACAGGAGATGAATACTTTGATGAACTAGTATCAAGGTCATTTATACGAAAGAACACTAAATATTTCCAATTCATGTTCACAATGCATGACCTCATCAATGATTTAGCCACAGCTGTATCAGGAAGGTATTGTTTCAGATATGACAGTCCAAAACCAAGTGAATGTTTAGATAAAATTCGCTATTTGTCTTATAGCAGGGGAGAGTATGACTATTGTCATAAGTTTGATGGAATTTTGAAAATAAAGTGTTTACGAACCTTCATAGCCTTACCAATGAGAAAGAATCCATACCAAGCTAGCAAAAATTGTTACTTAGCAAAAAGGTTGCCACATGATTTGTTCCTAAAGATGAGGTATTTACGAGTTCTATCTTTGTCACATTATGACAATATCACTGAGTTGTCTGATTCTCTTGGAAATTTCATCCATTTGCGATATCTGGATCTCTCTTACACTAAAATCAGAAAGTTACCTAATGGAACGTGCAAGTTGTACAATCTGCAGACTTTACTGCTATCATGTTGTTCGTATCTAATTGAGTTGCCTCAAGACATGGACAAACTGATTAATTTGCGCCACAGTGATCTTAGTGGAACCAAGCTGAAGGAGATGCCCTCAAATGTGAGTAGGCTAAAATGTCTCAAAACTTTGACTTGCTTTGTTGTTAGCAAAAAAGAGGATGGATTAAAGGTTAGAGAATTGACAAATTTTCCACATTTACAAGGGAAACTCTCCATGTTAAACCTGCAACATGTTGTGGACGCCAATGATGCTTTTCAATCTGGTTTGAGAAACATGGAAAAAATTGAGGAGTTAGAATTGGAATGGGGCTGCAACACTGAAGACTCGCGTAATGAGAGAGAAGTGCTTGACCAGCTACAACCGTCATCAAACTTAAAGCATCTTACCATCAAATTTTATGGTGGCACCACCTTCCCAAATTGGTTGGGGCATTCTTCTTTCTGCAACATGGTATCTCTTACGATAAGTGATTGTAATCATTGTTGGTTGTTGCCACCACTTGGGCAATTACCTGCTTTGAAGCAACTCATTATTGACAGGCTCAAATCACTAAATTGTGTTGGAGTTGATTTCTATGGTAGAGGCTCCTCTTCTTTTCAACCATTTGCGTGCTTGAAGTATCTAAAATTTAAGGAGCTACCATGCTGGGAGGAATGGCTTTCCATCAGCGATAAAACTACCGAATTTCCTTCTCTTGAAGAGTTGTGTATATTCTACTGTCCCAAGCTAAAAGGAAACTTACCTAACAATCTTCCATCACTAAAAAGACTCAGAGTAGTTGAATGTGATTTACTTGAATTACAAAACTCAAATGAGGTGGATAACATCTACACTGGTGAGACTAAGATTCCACTGAAAAGATCATCTGATCTCAAATGGATCTCTACTCTTCACTCTTTACATGTTTTTGGTTCCCCAGGTGTACTGTCATTGTTTAACTACTTTACTGTTGGAAATCATGATCCTATACAGATATCCCTTAGGATGACAATCAGCAACAGTTGTCTTCGAATTTTGAATATCAAAAGAATTCCATCTCTCATATACTTTCAAAAAGATGGTCTTCCCACTTCATTGATGCACCTGCATATCCACAATTATAAAAATGCATCACAAAGCCTTACACATCTCAAAATCATCAATGTAGCAAATTGTCCTAACTTGGACTCTTTTCCACAAGATGGGTTGCCCACACCCAATCTAGAGAAATTATTTGTGCACACATGTGAGAATCTCAAGTGTCTGCCAGAATGGATTAACACCCTCACTGGCCTTCAAGAACTGAGTGTTTATGATCTTCCATGTCTCGAGTCATTTGCAAAAGAGGGCCTGCCTTGCAATTTACAAAAACTTGGGATTGTTGATAGTGGAACACTCTCAACAACATCCATCATTCAATGGGGTACTCGGTGGCTCACTTTTCTTATTGAACTAACAATTGGAGGGGATGATCTTGTCGATGCCTTGATGAAAAAGCTATTGCTTCCAACCTCTCTTGAGTCCCTTTGCATTAGAAACATTTCTTTCTTGGATGGCAAGGGGCTTCAACACCTCACTTCTTTGGAAAATTTGCAGATTATAAACTGTCCAAACCTTGAGTTGTTGCCAGAAAAGGAATTGCTTCCTCTTTCTCTTTCAGTACTTGGTATTTGTGAGTGTCCTTTATTACAAATCACTTATCAAAGGAATGGAGGAGTAAATTGGCCCAGGATTTCCCATATTCCATGCATAAAGTTCAATGAAGAAGTAATAATATGA 3654 0.3842 MALVGEALLSASVHALVEKIVSTEFKDLFCREEFDPSILNKLKITLLTLRAVLNDAEEQQIRNPAVQEWLHELKDSVYDVDSLLDEIYTKSLQRKVEAKSQSFSYQARNFLSYSFKQFRGRMNFELQNLMQRLEHFAKEKGILGLKEGVSGSVWNGTVTTSVVDQSIIYGRDGDIDKLREYLLSDDDCDNHVGVITIVGMGGLGKTTLAQLLYNDQEVKQHFSLKAWACITNNFDVVRVTKTLLESVSLKPVVTNNLDALHVELQQSLSGRKFLFVLDDLWDTYNDWNRLKAILRSGEVGSKIIITTRQENVALAMHTFPIHNLMPLSHQDCWDLLAKHAFGANQSNRDPKLEEIGREIAAKCDGLPLAAEALGSLLRTKLSEKDWNRILKSNIWDLPNDKVLLPLLLSYYYLPPPLKGCFAYCSIFPKNYELNKEMLVRLWMAEGLIQFRSNQSLEETGDEYFDELVSRSFIRKNTKYFQFMFTMHDLINDLATAVSGRYCFRYDSPKPSECLDKIRYLSYSRGEYDYCHKFDGILKIKCLRTFIALPMRKNPYQASKNCYLAKRLPHDLFLKMRYLRVLSLSHYDNITELSDSLGNFIHLRYLDLSYTKIRKLPNGTCKLYNLQTLLLSCCSYLIELPQDMDKLINLRHSDLSGTKLKEMPSNVSRLKCLKTLTCFVVSKKEDGLKVRELTNFPHLQGKLSMLNLQHVVDANDAFQSGLRNMEKIEELELEWGCNTEDSRNEREVLDQLQPSSNLKHLTIKFYGGTTFPNWLGHSSFCNMVSLTISDCNHCWLLPPLGQLPALKQLIIDRLKSLNCVGVDFYGRGSSSFQPFACLKYLKFKELPCWEEWLSISDKTTEFPSLEELCIFYCPKLKGNLPNNLPSLKRLRVVECDLLELQNSNEVDNIYTGETKIPLKRSSDLKWISTLHSLHVFGSPGVLSLFNYFTVGNHDPIQISLRMTISNSCLRILNIKRIPSLIYFQKDGLPTSLMHLHIHNYKNASQSLTHLKIINVANCPNLDSFPQDGLPTPNLEKLFVHTCENLKCLPEWINTLTGLQELSVYDLPCLESFAKEGLPCNLQKLGIVDSGTLSTTSIIQWGTRWLTFLIELTIGGDDLVDALMKKLLLPTSLESLCIRNISFLDGKGLQHLTSLENLQIINCPNLELLPEKELLPLSLSVLGICECPLLQITYQRNGGVNWPRISHIPCIKFNEEVII* 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0326 1217 Pfam Rx N-terminal domain 36 104 IPR041118 -
Apr10g0326 1217 SUPERFAMILY RNI-like 966 1188 - -
Apr10g0326 1217 Gene3D - 326 409 IPR042197 -
Apr10g0326 1217 PANTHER DISEASE RESISTANCE PROTEIN RP 21 1023 IPR044974 GO:0006952
Apr10g0326 1217 PRINTS Disease resistance protein signature 194 209 - -
Apr10g0326 1217 PRINTS Disease resistance protein signature 267 281 - -
Apr10g0326 1217 PRINTS Disease resistance protein signature 363 377 - -
Apr10g0326 1217 PRINTS Disease resistance protein signature 1004 1020 - -
Apr10g0326 1217 Gene3D Ribonuclease Inhibitor 944 1195 IPR032675 -
Apr10g0326 1217 SUPERFAMILY L domain-like 485 898 - -
Apr10g0326 1217 PANTHER OS05G0414200 PROTEIN 21 1023 - -
Apr10g0326 1217 Coils Coil 39 59 - -
Apr10g0326 1217 Gene3D - 410 496 IPR036388 -
Apr10g0326 1217 ProSiteProfiles Leucine-rich repeat profile. 601 622 IPR001611 GO:0005515
Apr10g0326 1217 Gene3D Ribonuclease Inhibitor 551 938 IPR032675 -
Apr10g0326 1217 Gene3D - 157 320 IPR027417 -
Apr10g0326 1217 Gene3D - 31 124 - -
Apr10g0326 1217 Pfam NB-ARC domain 173 391 IPR002182 GO:0043531
Apr10g0326 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 424 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0326 Apr-Chr10 7822096 7827499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0326 589 683 WRKY Transcription Factor Family AT4G12020 38.542 3.61e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0326 - - aprc:113850186 2253.79