Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0325 ATGGAAGCGCTCTCTAATGCCATCAACAGGCTGGTTAGCCGAATTGTTTCCATTGATTTCACTATCAAACTCGAGTATTCAATACTGAATGATATAAGGATGAGACTAGTGACTGTTTATAAGGGCCTAGATAATGCTAAGGAGAATCCTATACCAATTCATCTCATGCGAAATTGGCTTCATGAACTCAAAAATGTCGTGTATGAAGTTGATAACATAGTGGATGAAATTGAAGCAAGGGCTTTGACACACAAGATAGAAGCTGAGTCAAAAACTTTTACCGGTCAGGTTTGGAATTTACTTCATACTCCATTCAGATCATCGTTTAACATGGGCATGAATGATGAACTAAAAACACTATTTTTAAGGCTAGATCTTCTTGTAAGTATAAAATGTGACTTTTTGTCGCCAAAAGATGTTTCTCAGGGTGTTTGGATTGAATCAACTACAACATCTGTTGTTGATCAGCCTGCTGTGTATGGTAGAGATGGTGATATGAACAAACTAAAAGAGTACTTGCTCTCATATGTTGCTTGTGATGATCGTGCAAGAGTGCTTACTATCGTGGGCATGGGAGGGATTGGCAAAACAACAGTCGCTCAACTTCTTTACAATGACCAACAAGTAAATAAGCACTTTGACTTGAAAGCTTGGGTTTGTATGACCAAGGATTCAATTGTTTCTACGGTAACTGCAACTCTTCTTGAGTCTGTTTCTTCAAAGCCAGTTACAAATAATTTTAGTGCTGTACAAGTGGAATTGAAGCAACGCCTACGTGGTAAGAAATTTTTGTTTGTATTAGATGATGTACAGGATACCCGTGTTTGGTATGGTCTACTGGATATTCTAAATTCCGGGCGTCAGGGAAGCAGGGTTATTGTCACAACACGCCAAGAAAAGGTTGCATTGGCTGTGCATACCTTTCCTATCCACTACTTGATGCCTCTATCAAGCGAAGATTGTTGGTGTCTACTTGCCAATCATGCATTTGGAGTGAAACATTCCGCTAAAACCCCAAAGCTAGAAATGATTGGTAGAAAAATTGCAGATAAATGTGGTGGTATACCGATTGCTGCAGTAGCTATTGGGAATCTACTTCAAACCAAATTTTCTGAAAATGAGTGGAATACAGTTTTAGAAAGCAACATTTGGGACTTGCCTGAGGACAACATACTGCCAGCTCTACAATTGAGCTACTGTTGTTTGCCTGCCCCATTGAAAGAATGCTTTGCCTATTGTTCAATTTTTCCAAAGGGTTACAAGTTAGATAAGGAGACGGTAGTTAGACTATGGATGGCAGAAGGTTTAATTCAATATAATAGTTATAAAAGTTTGGAAGATACAGGAAATGAATACTTTGATGAATTGGTTTCAAGTTCGTTAATTCTTAGAGACTCAAATTATGAAAACATGTTCAAAATGCATGACCTTATCAATGATTTAGCCACAGCTACAATGGCAGGGTATTGTTGTAGATTTGAAGACCCAAAGCTAAGTCCCAATCTTAATAAAGTTCGCCATTTGTCTTACAACAGGGGAAAATATGACCATCATGGTAAATTTGATGCTATTTTTGGAATAAAGGAGTTGCGTACCTTCATAGCCTTACCATTAGAGAAGGATGAATACCAAACTGACAGAAATTGTTACTTAGCTAAAAGTGTGCTACATGCTCTATTGCTACAGATGAGGTGCTTACGAGTACTGTCTTTGTCACACTATGACAATATCTTTGAGTTGCCTAATTCTCTTGGAGATTTGATTCATTTGCGATATTTGGATCTCTCTTACACTAAAATTAAAAGGTTGCCTAATGGGATATGTAAGCTTTACAATTTGCAGACCTTATTGCTATCAAATTGTGAGCATCTAATTGAATTGCCTCGAGAAATAGAAAAGTTGATTAATTTGCGCCACATCGATCTTACTGGAACTAAGCTAAAAGAGATGCCGAGAAGCATGAGCTTGCTAAAACATCTCAAAACTTTGACTTCCTTTGTTGTCAGCAAACACAAGGATGGATTAAAGATTAAAGATCTAGGTAATTTCCTACATCTGCAAGGGAAGCTTTCCATCTTAAACCTGCAAAATGTTGTGGATGCCATTGATGCTTTTCAAGCCAATTTGCAAAATAAAAAACAAATTGATGAGATAGTGTTCAAATGGGGCCCTAATGCAGAAAATTCACATTTTGAGAGAGTACTTGAGTATTTGCAACCATCAACAGAGTTGAAGAAACTAGCCATCGAATTTTATAGTGGCATTAGCTTTTCAAATTGGTTAGGAGATTCTTCGTTTTGTAACATGGTATCCCTTTGCTTAAGCGATTGTAATTATTGTTTGTTGCTCCCACCACTAGGGCAATTACCTGCTCTCAAGAGTCTCAGGATTTTCAGGCTAAAATCACTACAAATTGTTGGAACTGAATTCTATGGTGGAGTTTCCGCTTCATATCAGCCATTTCTGTCCCTAGAGTTGCTAATATTTGATGAAATGCCAAAGTGGGAAGAATGGCTTTCCATGAGTGATATAGCTACTGAATTTCCTTCTCTTCGAGACCTACATGTCTTCCGATGTCCCAGACTGAAAGGAAACTTACCCTACAATCTTCCATCCTTAATTACATTAAGGATATTTGGATGTGATCTACTTGAGTTACGAAGCTCAAATGAGGCAGATTTCCGGTGGACCTATGGTCTTCAAACTTTACAAGTTGCTCAGTCCCCGCTTGTGTTGTCATTACTAGAACTAAGGTCAATGCCCTTTCTCAATTACTTTAATATTGCAGGATACCATGATTCTCTACAAGTATTCCCTAGGATGATCAGCAGTAGCAATTATCTTCAAACTCTGTATATTCATAGCATTCCAACTCTCAAGTCCTTTCAAAATGATGGTCTACCAACTTCATTAGTGCACCTTGGTATCTTCAATTGTGAGAGATTAGAATTTCCACCTCCTAAGTTGTTGCATAACTATTCATCACTCGTGCAACTGATATTAAGTGATAGTTGTCATTCAATGGAATGCTTCCCATTAGACAGTTTTCCTGTTCTTGTGCATCTTGAAATCAAACATTGCACTAATTTGAAATCCTTTTCTGTCTCCGATAATTTGGCCTACAAGCTGTCACATCTGAAAACCTTGTATGTAAGAAATTGTCCTAATCTGAGTTCCTTTCCACGGGGTGGTTTATCCACTTTCAATTTGGAAAGATTGCTGTTGCGCAAATGTGAGAAACTCATCTCACTTCCTGAACGGGTTGACACCCTGACTAGCCTTCAACATTTGATGGTTTGTGAGCTTCCATGTCTTGAGTCTTTTGCTGAAGAGGGTTTGCCATCCAACTTAAAAAAGCTTGAGGTCTTCAATTGTGAAAAACTGTCAACAAAATCCGTCACTCAATGGGGTTCTCAGTGGCTAACTTCTCTTACAGAAATAACCATTGGAGGTGATGATCTTGTCAATGCCTTGATGACAGGGCAATTGCTTCCCACTTCTCTTGTGTCCCTGTGCATCCGAGACATTTCTTATTTTGATGGGAAGGGGCTTCCACATCTTACTTCTCTGGAAAATCTGCAATTTAAGTCATGTTTTAATCTTCAGTTTTTGCCAGAAATGGAGTTCCTAAATCTTCCTCTTTCAGTACTTAGTATCAGTGATTGTCCTTTATTACAAGAAACCTATCTAAGCAATGGGGGCATAAATTTCCCCAAGATTGGCCACATTCCGTGCATAGAGATCAATGAAGAAGTTATAATGTGA 3765 0.3825 MEALSNAINRLVSRIVSIDFTIKLEYSILNDIRMRLVTVYKGLDNAKENPIPIHLMRNWLHELKNVVYEVDNIVDEIEARALTHKIEAESKTFTGQVWNLLHTPFRSSFNMGMNDELKTLFLRLDLLVSIKCDFLSPKDVSQGVWIESTTTSVVDQPAVYGRDGDMNKLKEYLLSYVACDDRARVLTIVGMGGIGKTTVAQLLYNDQQVNKHFDLKAWVCMTKDSIVSTVTATLLESVSSKPVTNNFSAVQVELKQRLRGKKFLFVLDDVQDTRVWYGLLDILNSGRQGSRVIVTTRQEKVALAVHTFPIHYLMPLSSEDCWCLLANHAFGVKHSAKTPKLEMIGRKIADKCGGIPIAAVAIGNLLQTKFSENEWNTVLESNIWDLPEDNILPALQLSYCCLPAPLKECFAYCSIFPKGYKLDKETVVRLWMAEGLIQYNSYKSLEDTGNEYFDELVSSSLILRDSNYENMFKMHDLINDLATATMAGYCCRFEDPKLSPNLNKVRHLSYNRGKYDHHGKFDAIFGIKELRTFIALPLEKDEYQTDRNCYLAKSVLHALLLQMRCLRVLSLSHYDNIFELPNSLGDLIHLRYLDLSYTKIKRLPNGICKLYNLQTLLLSNCEHLIELPREIEKLINLRHIDLTGTKLKEMPRSMSLLKHLKTLTSFVVSKHKDGLKIKDLGNFLHLQGKLSILNLQNVVDAIDAFQANLQNKKQIDEIVFKWGPNAENSHFERVLEYLQPSTELKKLAIEFYSGISFSNWLGDSSFCNMVSLCLSDCNYCLLLPPLGQLPALKSLRIFRLKSLQIVGTEFYGGVSASYQPFLSLELLIFDEMPKWEEWLSMSDIATEFPSLRDLHVFRCPRLKGNLPYNLPSLITLRIFGCDLLELRSSNEADFRWTYGLQTLQVAQSPLVLSLLELRSMPFLNYFNIAGYHDSLQVFPRMISSSNYLQTLYIHSIPTLKSFQNDGLPTSLVHLGIFNCERLEFPPPKLLHNYSSLVQLILSDSCHSMECFPLDSFPVLVHLEIKHCTNLKSFSVSDNLAYKLSHLKTLYVRNCPNLSSFPRGGLSTFNLERLLLRKCEKLISLPERVDTLTSLQHLMVCELPCLESFAEEGLPSNLKKLEVFNCEKLSTKSVTQWGSQWLTSLTEITIGGDDLVNALMTGQLLPTSLVSLCIRDISYFDGKGLPHLTSLENLQFKSCFNLQFLPEMEFLNLPLSVLSISDCPLLQETYLSNGGINFPKIGHIPCIEINEEVIM* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0325 1254 Pfam Rx N-terminal domain 5 91 IPR041118 -
Apr10g0325 1254 Gene3D Ribonuclease Inhibitor 899 1111 IPR032675 -
Apr10g0325 1254 PANTHER DISEASE RESISTANCE PROTEIN RP 15 962 IPR044974 GO:0006952
Apr10g0325 1254 SUPERFAMILY L domain-like 473 931 - -
Apr10g0325 1254 Gene3D Ribonuclease Inhibitor 542 889 IPR032675 -
Apr10g0325 1254 Gene3D - 315 397 IPR042197 -
Apr10g0325 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 413 IPR027417 -
Apr10g0325 1254 Gene3D - 398 485 IPR036388 -
Apr10g0325 1254 SUPERFAMILY L domain-like 934 1227 - -
Apr10g0325 1254 Pfam NB-ARC domain 164 380 IPR002182 GO:0043531
Apr10g0325 1254 Gene3D - 144 308 IPR027417 -
Apr10g0325 1254 PRINTS Disease resistance protein signature 185 200 - -
Apr10g0325 1254 PRINTS Disease resistance protein signature 257 271 - -
Apr10g0325 1254 PRINTS Disease resistance protein signature 352 366 - -
Apr10g0325 1254 PRINTS Disease resistance protein signature 608 624 - -
Apr10g0325 1254 SMART LRR_typ_2 634 657 IPR003591 -
Apr10g0325 1254 SMART LRR_typ_2 587 610 IPR003591 -
Apr10g0325 1254 Gene3D Ribonuclease Inhibitor 1112 1248 IPR032675 -
Apr10g0325 1254 PANTHER OS05G0414200 PROTEIN 15 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0325 Apr-Chr10 7813217 7820135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0325 184 688 WRKY Transcription Factor Family AT5G45050 24.482 1.39e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0325 - - aprc:113850186 1441.4