Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0324 ATGTCTTCTTCGTCCTTGGATCAATGGATCCACGACGTGTTCCTCAGTTTCAGAGGAAGAGACACTCGTTGGAACTTTGTGTCTCATCTTTACGCTGCCCTCTCAAACGCCGGAATCAGAACATTCCTTGACGACGAGAAGCTTGATAGGGGAACGGAACTAGAACCTGAACTACTGCGAGCAATAGAAGGGTCTCGTATATGTATCGTCGTTTTCTCGCATACCTATGCTGAATCTAGTTGGTGCCTTATGGAACTCGAAAAGATTATGGAATGCCACGAAACAATTGGTCAGGAGGTTATGCCTGTTTTTCATGATGTTGATCCATGTGATGTACGTAATCAGACCGGTATTTTTCAAGAAGCTTTCGAAGGACATGCGATTGGGTACTCAGGTGTCACCGATGTGTTGTTGCGTTGGAAGAGAGCACTCAAAAATGCTGCAAATTTGGCTGGTTGGCATGCCAAAAGTTTCAAGTCTGAAAACATGCTAGTGAAAGAAATCGTTGACTGTATTTTGAGAAAAGTAGAAAACAGATACATGTCAATTCCAAGCTTTCCTGTTGGATTATCATCCCGCGCGCAAGATGTGATTCTGTTTTTAGAAGCGCGATCAAGAACAACTAGTATTGTAGGGATTTGGGGGATGGGAGGATCTGGTAAAACAGCAATTGCTAAAGCTGTCTACAATCAAATTCATCACAAGTTTGAAGATACAAGTTTCCTTCAAAATGTTAGAGAAGCTTGTGAAAAGCCTAGAGGCCAAATTGATTTACAGGAACAACTTCTTTGTGACATAGATCAAACAAGACGGGTGAAGATACTTGATGATGAATCAGGAAAAACTATGATCAAGGAAAGACTTTGCAGCAGAAGGATACTCATTGTACTTGATGATATAAATAGTTCTGGCCAGTTAAATGCACTATGTGGAGATCGTAATTGGGTTGGTAGAGGAAGCATAATAATTGTTACAACAAGAGATGTACACATACTTAATGTCCTTACAGTTGACTATGTCTATGAAGTGAAGGAAATGAACAACAATGAGTCCCTTGAGCTTTTTAATTGGCATGCTTTTAAGGGAAAAAGTCCAAGAGAAGATTTTGTTGAACTCTCAAGACATGTTGTAGCTTACTGCAGAGGCCTACCGTTAGCTCTTGAAGTCATTGGGTCTTGTTTGTATCAGAGAACAAAAGAACAATGGAAAAGTGTGATATCAAAACTAAAAAGAATTCCTAATCATGAAATACAACAAAAACTAAAAATAAGCTATGATGGTTTAAATGATGATACAGAGAGAGAGATATTTCTTGACATATGTTGTTTTTTCATTGGTAAGGACAGAGCCTATGTTACAGACATCCTAAATGGCTGTGACTTTTATGCTGAAATTGGAATAACAGTCCTGATTGAGCGGTGCCTCCTAAAAGTTGAATATAAAAACAAGCTTGGAATGCATGGTTTGCTACGTGACATGGGAAGAGAAATCATTCGTCAAGAATCAAAAAAGAATCCTGAAACGCGTAGTCGACTGTGGTTTCAAGAGGATGTACTTAATGTATTGACAGAAGATAGTGGAACAAAGGATGTTAAGGGATTGGCTTTGAAACTGCCAAGAAACAGTAAAGCATGCTTCAAAACCAAGGCTTTTAAGAAAATGAAGAATCTGAGAGTGTTGCAACTTGACTATGTACAACTAACTGGCAATTATGGGTATCTTTCCAAACGGTTGAGATGGGTCCATTGGCATGGATTTCCTTCAACCTGCCTACCCAGTGAATTTTGTTTGGAAAATCTAGTTGCTATTGACTTAAGGCATAGTAATCTTAAAATAGTTTGGAAGGAACCTCAGTTGTTAGAGAGGCTAAAGTTTCTCAATCTCAGTCACTCCAGGAGCTTGACAAAAACCCCTGATTTTTCAACACTACCAAATCTTGAAAAGCTCATTCTCAAACATTGTCCAAGCTTGTCCGAGGTGCACCAGTCCATTGGAGATCTCAGAAATATTCTTCTAATAAATTTGAAGGACTGTACAAGACTTGGCAATCTCCCAAGAAATATTTATAAGTTGAAATCTTTGAAAACACTTGTTATTTCTGGTTGTTCAAAGATTGACAAGGTGGAAGAAGATATAGTACAGATGGAATCGTTGACAACCCTACTTGCAAAGGGTACTGCTATAAAACAAGTCCCCTTGTCAATAATAAGGAAAAAAGGCATTGGATATGTATCTCTATGTGGATATGAAGGATTGTCACATGATATTTTTCCTTCTATTATTTGGTCTTGGATGTCACCCAAAACAAATGCTCTATCCCGTAGTTGCTCATTTTGGGACATTTCATCAACTCTAGTGTCCATAGATTTGCAGAATATCAATTTGGGTGATATATTATTGATTCTTAGAGGCCTTTCAAGACTTCAAAGTGTTAGGGTGCAATTCTGCTCTCAGAATCTTCTATATTATGTATATGATGAAATTTTTACTGTGTTGCAAGCAACATCCGATGTATTGAGAATCTCAGGACATTCCTTGAGGTCTCTTTGGATAGGAATGGGAAGTTATCATCAATTTGTCATCACTCTTTGCAAGTGCGTACCACAGGGATTTACTACCAATGAGTCTGGCAGTTTTTCTCTCCCAGGTGACAATTATCCTTATTGGTCAACCCATAAAGGTCACAGGCATTCAATACTTTTCAAAGTGCCTCAAGTTAATGATTATCACATGAAGGGAATGATATTGCATGTTGTTTGTTCATCTATGTTAGAAAGTGTGGCGGCAGATTGTCGTATTAGTGTCTTGATCATTAACTACACAAAGTACACCATACAGCTCTACAATAGAGGCATACTAAAGTCCTTTAATGATCAAGAGTGGAATGACATAATATCAAATTTAGGACCTGGTGATAAAGTGAAGATTTTTGTAGCTTTGGGACATGGATTGACTGTCAAGAAGACAGTAGTTTTCCTACTTTATGGTCAATAA 2994 0.3821 MSSSSLDQWIHDVFLSFRGRDTRWNFVSHLYAALSNAGIRTFLDDEKLDRGTELEPELLRAIEGSRICIVVFSHTYAESSWCLMELEKIMECHETIGQEVMPVFHDVDPCDVRNQTGIFQEAFEGHAIGYSGVTDVLLRWKRALKNAANLAGWHAKSFKSENMLVKEIVDCILRKVENRYMSIPSFPVGLSSRAQDVILFLEARSRTTSIVGIWGMGGSGKTAIAKAVYNQIHHKFEDTSFLQNVREACEKPRGQIDLQEQLLCDIDQTRRVKILDDESGKTMIKERLCSRRILIVLDDINSSGQLNALCGDRNWVGRGSIIIVTTRDVHILNVLTVDYVYEVKEMNNNESLELFNWHAFKGKSPREDFVELSRHVVAYCRGLPLALEVIGSCLYQRTKEQWKSVISKLKRIPNHEIQQKLKISYDGLNDDTEREIFLDICCFFIGKDRAYVTDILNGCDFYAEIGITVLIERCLLKVEYKNKLGMHGLLRDMGREIIRQESKKNPETRSRLWFQEDVLNVLTEDSGTKDVKGLALKLPRNSKACFKTKAFKKMKNLRVLQLDYVQLTGNYGYLSKRLRWVHWHGFPSTCLPSEFCLENLVAIDLRHSNLKIVWKEPQLLERLKFLNLSHSRSLTKTPDFSTLPNLEKLILKHCPSLSEVHQSIGDLRNILLINLKDCTRLGNLPRNIYKLKSLKTLVISGCSKIDKVEEDIVQMESLTTLLAKGTAIKQVPLSIIRKKGIGYVSLCGYEGLSHDIFPSIIWSWMSPKTNALSRSCSFWDISSTLVSIDLQNINLGDILLILRGLSRLQSVRVQFCSQNLLYYVYDEIFTVLQATSDVLRISGHSLRSLWIGMGSYHQFVITLCKCVPQGFTTNESGSFSLPGDNYPYWSTHKGHRHSILFKVPQVNDYHMKGMILHVVCSSMLESVAADCRISVLIINYTKYTIQLYNRGILKSFNDQEWNDIISNLGPGDKVKIFVALGHGLTVKKTVVFLLYGQ* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0324 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 991 IPR044974 GO:0006952
Apr10g0324 997 SMART till_3 10 150 IPR000157 GO:0007165
Apr10g0324 997 Gene3D - 182 340 IPR027417 -
Apr10g0324 997 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Apr10g0324 997 SUPERFAMILY L domain-like 535 852 - -
Apr10g0324 997 Gene3D - 345 429 IPR042197 -
Apr10g0324 997 Gene3D - 5 181 IPR035897 -
Apr10g0324 997 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 991 - -
Apr10g0324 997 SUPERFAMILY "Winged helix" DNA-binding domain 416 522 IPR036390 -
Apr10g0324 997 Pfam NB-ARC domain 201 420 IPR002182 GO:0043531
Apr10g0324 997 PRINTS Disease resistance protein signature 210 225 - -
Apr10g0324 997 PRINTS Disease resistance protein signature 287 301 - -
Apr10g0324 997 PRINTS Disease resistance protein signature 380 394 - -
Apr10g0324 997 PRINTS Disease resistance protein signature 689 705 - -
Apr10g0324 997 Gene3D Ribonuclease Inhibitor 528 859 IPR032675 -
Apr10g0324 997 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Apr10g0324 997 Pfam TIR domain 11 183 IPR000157 GO:0007165
Apr10g0324 997 ProSiteProfiles TIR domain profile. 9 176 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0324 Apr-Chr10 7787456 7793399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0324 3 735 WRKY Transcription Factor Family AT4G12020 30.810 4.05e-84 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0324 - - gmx:100813173 1157.13