Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0323 ATGGAATCTTTGACAACACTAGTTGCAAATAATACTGGGGTAAAGTACGTTCCTGTTATAGAAGAAGCTAGTTCTAGGCCACTTACTTGGAAGCCTAAAAACAAAAGTGGAATCTTCTCGCTTAACGACGACGCATTTGGTGTTCGCTTTGCTCCGTATCATACGTTTTCTATTTCTCGTCTTGCAAGCGTTGACTTGAAAGTCATTCATCGAATCTCTCAATCAATGTCATTTTCTTCATCATCATTCTCGAATCCTCGATGGATCTACGACGTGTTCATCAACTTCAGAGGAGAAGACACGCGTAACAGCTTCGTTTCTCATCTGCACGCTTCCCTGGCAAATGCGGGAATCCAAACGTTCATCGATGAGTCACTTCGCAAAGGAAAGATGCTGAAAGTAGAATTAATGGAAGCAATAAAAGCGTCTCACATAGCAGTGGTTGTTTTCTCCAAAAGCTACGCTGAATCTTCATATTGTCTTCATGAGCTAACGGAAATCATGCAATGCCACGCAAGTTATGGGCAAGTTGTTGTGCCCATTTTCTATGACGTTGATCCAGCTGATGTGCGTCATCACAAGGGTGCTTTTGGAGAACCTTTGGAAGCGCTGGCAGCAAAAAGATACTCACAGGAAGTGGCTGAACCTATGTTGTCCTGGTGGAAGAAAGCTCTCACCCAAGCTGCAAATTTGACTGGTTGGGATATCAAGAGTTACCGAAGTGAAGCTGAGCAAGTGAAGGAAATTGTTAAGTACATCGTGACAAAACTAGGCAACACATTGTTGTCTATTACCGATTTTCCAGTTGGATTAGAATCACGTGTGCAAGAAGTGATTGGTTTCATTGGAGCTCAATCAATAACAGAGTTTTGTAAAATTGGGATCTGGGGAATGGGAGGATCTGGTAAAACAACCACTGCCAAAGCCATCTACAATAAAATTCATCGCAATTTTGAGAATAGAAGTTTCATTGAAAATATTAGAGAAGTTTGGGAAAAGGATAACAGAGGGTGTATCAATTTACAAGAACAACTTATTTCAGATCTCCTAAAAATAGATGTGAAAATATGGAATATTGCGTCAGGGACAACTATGATTGAGAAAAGACTTCACCAGAAAAAGGCACTTATTGTATTTGATGACGTGACCAACTTTGAGCAATTAAAAGCTCTATGTGGAAATGGTAAATGGATTGGTTCGGGCACTATATTAATTGTTACCAGCAGAGATATACGCTTGCTTAACTTACTTGAAGTTGACCACATTTGCAAAATGAAGGAAATGGACGAAAATGAGTCCCTTGAACTTTTCAGTTGGCATGCCTTTAGAAAAGCAAGTCCAAGAGAAGACTTCAATGAACTCTCAAGAAATGTAGTTCTTTACTGTGGTGGACTACCGTTGGCTCTTGAAGTCCTTGGATCATACTTGTATGAAAGGACAAAACAACAATGGAAATGTGTATTATCAAAACTAGAGAAAATTCCCAATGATCAAGTACAAGAGAAACTCAAAATAAGCTATGATGGTTTAAATTGTGAGGAAAAGAATATATTTCTTGACATATGTTGTTTCTTTATTGGCAAGGACAGAGCCTATGTTACAGATGTACTAGATGACTGTGGATTTTATCCTGAAATGGGAATAACAATCTTGGTAGAAAGGAGCCTCATAAAGGTTGAAAAGAATAATAAGCTTGCAATGCATGATTTGCTATGCGACATGGGCAAAGAAATTGTTCGTCAAAGTTCATCACAAGAACCTGAGAAGCGTAGTCGATTGTGGGCTCATGAGGATGTAGTTGATGTATTGACAGAACATACTGGGACCAAAGCTATTGAGGGGTTGGCATTGAAATTGGAAAGAACTAGTAAAGTTTGCTTTGATACTAAAGCATTTGAGAAAATGAAGAGATTAAGACTTTTGAAACTTGATCATGTACATCTTGTTGGAGATTATGAGTTTCTTCCCAAACATCTAAGATGGGTCTATTGGCAAGGATTTCCTTTAGAGCACATACCTGACAACTTTTATCTGGGAAATGTAGTTGCTATTGACTTAAAATACAGTAATATTAAACTAGTATGGAAGGAGCCCCAGTTGTTGGAAACACTAAAAATCATCAATCTTAGTCATTCAAGGTACTTGACAAAAACCCCTGACTTTTCAAAACTGCCAAATCTTGAACAGCTCATTCTCAAAGATTGTCCAAGCTTGTCTGATGTACACCATTCCATTGGAGATCTGAGTAATCTTCTTCTGATAAATTTGAAAGACTGTATAAGCCTTAGCAATCTCCCAAACAGGATATATCAGTCAAAATCTTTGCAAACCCTCATCCTCTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAAATATAGTGCAGATGGAATCCTTGAGAACACTGATTGCCAAAGATGCAGCTATAAAAGAAATGCCACGTTCGATAGTAAGATCAAAAAGCATTGGATACATATCCCTTTGTGGTTATGAAGGGTTTACCCGTGATGTATTTCCTTCTCTCCTTTGGTCTTGGATGTCACCAACGATGAATCCCATGTCTTGTATTCCTTCATTTGGGAGCATGTCATGCTCATCTTTAGTTTCCATGGATATTTCATATCTAGAAAAAACATCATTTACATCAACATCACAAATGTTGGATCATTCATTGAGGTCTCTTTTGATTGGAATGGGAACTTACTGCCAAGTCTTTGATGAATTGAGCAAGGGCATGTCAAAGGAACTGACTACCAGTGGATCTACTGGTTTTTCTCTACCCAGTGACAACTTTCCTCATTGGTTAACCTATATTGGTGAAGGACATTCAGTACTTTTCAAAGTGCCTCATAGTGATTGGTTCATGAAGGGAATGATCTTACGTGTTCTTTATTCATCCACAGCTGAAATAATGGCAGACGATTGTCTTAGTATCTTGATTGTTAATTACACAAAGTGCACCATCCAGTTATACAAGCGAGACACATCAATTTCCTTTGATGATCAAGACTGGCAAGACATTATATCAAATCTAGGACCTAAGGACAATATGGAGATTTGTGTTGCTTTTGGGCAAGGATTGACTATCAAGAGGACAACCGTTTTTCTAATATATGATAAATCGATTAATGTGGATCCAGAGACTTCATTGAACCCAAAGAAAAAGCTTCGAAAAGACTTCATATGA 3186 0.3826 MESLTTLVANNTGVKYVPVIEEASSRPLTWKPKNKSGIFSLNDDAFGVRFAPYHTFSISRLASVDLKVIHRISQSMSFSSSSFSNPRWIYDVFINFRGEDTRNSFVSHLHASLANAGIQTFIDESLRKGKMLKVELMEAIKASHIAVVVFSKSYAESSYCLHELTEIMQCHASYGQVVVPIFYDVDPADVRHHKGAFGEPLEALAAKRYSQEVAEPMLSWWKKALTQAANLTGWDIKSYRSEAEQVKEIVKYIVTKLGNTLLSITDFPVGLESRVQEVIGFIGAQSITEFCKIGIWGMGGSGKTTTAKAIYNKIHRNFENRSFIENIREVWEKDNRGCINLQEQLISDLLKIDVKIWNIASGTTMIEKRLHQKKALIVFDDVTNFEQLKALCGNGKWIGSGTILIVTSRDIRLLNLLEVDHICKMKEMDENESLELFSWHAFRKASPREDFNELSRNVVLYCGGLPLALEVLGSYLYERTKQQWKCVLSKLEKIPNDQVQEKLKISYDGLNCEEKNIFLDICCFFIGKDRAYVTDVLDDCGFYPEMGITILVERSLIKVEKNNKLAMHDLLCDMGKEIVRQSSSQEPEKRSRLWAHEDVVDVLTEHTGTKAIEGLALKLERTSKVCFDTKAFEKMKRLRLLKLDHVHLVGDYEFLPKHLRWVYWQGFPLEHIPDNFYLGNVVAIDLKYSNIKLVWKEPQLLETLKIINLSHSRYLTKTPDFSKLPNLEQLILKDCPSLSDVHHSIGDLSNLLLINLKDCISLSNLPNRIYQSKSLQTLILSGCSKIDKLEENIVQMESLRTLIAKDAAIKEMPRSIVRSKSIGYISLCGYEGFTRDVFPSLLWSWMSPTMNPMSCIPSFGSMSCSSLVSMDISYLEKTSFTSTSQMLDHSLRSLLIGMGTYCQVFDELSKGMSKELTTSGSTGFSLPSDNFPHWLTYIGEGHSVLFKVPHSDWFMKGMILRVLYSSTAEIMADDCLSILIVNYTKCTIQLYKRDTSISFDDQDWQDIISNLGPKDNMEICVAFGQGLTIKRTTVFLIYDKSINVDPETSLNPKKKLRKDFI* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0323 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 262 521 IPR027417 -
Apr10g0323 1061 Pfam NB-ARC domain 274 500 IPR002182 GO:0043531
Apr10g0323 1061 Gene3D Ribonuclease Inhibitor 607 918 IPR032675 -
Apr10g0323 1061 Gene3D - 84 260 IPR035897 -
Apr10g0323 1061 Gene3D - 427 511 IPR042197 -
Apr10g0323 1061 SMART till_3 89 231 IPR000157 GO:0007165
Apr10g0323 1061 PRINTS Disease resistance protein signature 292 307 - -
Apr10g0323 1061 PRINTS Disease resistance protein signature 369 383 - -
Apr10g0323 1061 PRINTS Disease resistance protein signature 462 476 - -
Apr10g0323 1061 PRINTS Disease resistance protein signature 722 738 - -
Apr10g0323 1061 Pfam TIR domain 90 266 IPR000157 GO:0007165
Apr10g0323 1061 SUPERFAMILY Toll/Interleukin receptor TIR domain 79 234 IPR035897 -
Apr10g0323 1061 SUPERFAMILY L domain-like 617 908 - -
Apr10g0323 1061 Gene3D - 261 422 IPR027417 -
Apr10g0323 1061 ProSiteProfiles TIR domain profile. 88 257 IPR000157 GO:0007165
Apr10g0323 1061 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 92 1037 - -
Apr10g0323 1061 SUPERFAMILY "Winged helix" DNA-binding domain 498 603 IPR036390 -
Apr10g0323 1061 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 92 1037 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0323 Apr-Chr10 7750276 7760559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0323 90 816 WRKY Transcription Factor Family AT4G12020 30.295 5.90e-84 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0323 - - aprc:113850724 2124.36