Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0321 ATGTCTTCTTCTTCATCGTCATCAAAGTCGAAACCCCAATGGATATACGACGTTTTCATCAATTTCAGGGGAGAAGACACTCGAAAGAGTTTCGTTTCACATCTCTATTCTGCGCTTGCAAATGCTGGAATCAACACTTTCCTGGATGATGAGAAGCTTCCTAAGGGAAATGAGCTTAAATTTGAACTATTCCGAGCAATAGAAGGGTCTCAGATATCCATTGTCGTTTTCTCCCAAAATTATATTCAATCTAGTTGGTGTCTTGATGAACTTGTCAAAATCGTGAATTGCCGTGCACTTAGAGGTCAAGTCATTTTGCCCGTATTTTACGATATCATCCCGTCGTTTTTACGTGATAGCACTTATATTTCTTTTAAGAGTTTTTACACTCAAGATATTGGAGACCATCGGGAAGAACTATGGAAGAAAGCGCTGAACCAAGTTGCAAATTTGGGTGGTTGGGATGTGAGAAATTGCATAAATGATAACCGTGTTGTGAAGGAAATTGTTGATGCGGTTTTGAAAAGACTAGACAGAACATACTTGTCTATTACAGACTTTCCAGTTGGATTAGAATCTCGGGTTCAACATGTGATTGACTTTCTAAGAAAGAAAAAGAAAGGAGCTTGTGTATTTGGGATTTGGGGAATGGGAGGGATTGGCAAAACAACCATAGCCAAATCCATTTTCAACGAAATGAGGCATGAATTCAATGATAAAAGTTTCATTGAAAATATTAGAGAAGTTTGGGAAAAAGAGTGGGGCCAGATTGATTTACAAGCACAGCTTCTTTCAGATATCCTTAAAACAAGAAAGATGAAGGTGCATAGCATTGATTGGGGAAAAGCTATGATCAAGGAAACGCTTTGCACAAAAAAAGTACTTGTTGTACTTGATGATGTGAATAAGTTTGAACAATTAGATGCACTATGTGGAAATCGTAATGTGGTGGGTCCAGAAAGTGTAATAATCATTACAACCAGAGATGTACGTCTACTCAATGTCCTTGAAGTTGACTATGTATATGGAGTGGAGGAAATGAATGGAAGCGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTCAGGGAAGCGAATCCAATAAAAGGCTTCCTTGCTCTCTCAGAACAAGTAATTGCCTACTGTGGAGGACTACCACTAGCTCTTGAAGTTCTTGGATCTTACTTGTACAAAAGGAAAGAAGAAGAGTGGCAAAGTGTATTATCAAAACTAAAAAGGATACCCAATGATAGAATACAAGAGAAATTAAAAATAAGCTTTGATGGTTTAACGGATTATATGGAGAAGGACATATTTCTTGACATATGCTGCTTCTTTATCGGCAAGGACAGAGCCTATGTTACAGAGATACTAAATGGTTGTGGACTTCATGCTGATATTGGAATAACCGTCTTAGTAGAAAGGAGTCTCATAAAAGTTGTAAAGAACAACAAACTAGCAATTCATGATTTGGTACGAGACATGGGAAGAGAAATTATTCGTCAAAGTTCACCAGTAGAACCAGAGAAGCGCAGTCGATTATGGTTTCATGATGATGTCTATGATGTATTGACAGAACACACCGTAGGACTTTCTCTTCTTCCTATTTTAGAGCTTCTGATCATCCTCGATGTCTTAGCCATTGAGGGATTGGCTTTGAAGTTTCAAATAACTAGCAGAGGTTGCTTCACTACCAACACATTTGAGGACATGAAGAGGTTAAGACTTTTGCTACTTGATCGTGTCCAGCTTGTTGGAGATTATGGGCATCTTCCCAAACACATGAGATGGGTCTATTGGCATGGATTTTCACTAAAATACCTACCTGACAACTTTTATCAGGGAAATGTAGTTGCAATTGACATAAGACACAGTTATCTTAAACTAGTATGGAAGGAGCCCCAGTTGTTGGAGAGGCTAAAATTTCTTAATCTTAGTCATTCCATGAATTTATCAAAGACCCCTGATTTTTCAAAACTTCCGAATCTTGAGAAGCTCATCCTCAAAAATTGTCCAAGCTTGTATGAGGTACACCAATCCATTGGAGATCTAAGTAATCTTTCTCTCTTAAATTTGAAGGGTTGTACATGCCTTGGGAATCTCCCAATTATTATCTACAAGTTGAAGTCTTTAAAAACACTTATCCTTTCTGGTTGTTCAAAGATTGACAAGTTAGAAGAAGACATAGAGCAAATGGAATCCTTAACAACTCTAATTGCAGATAATACTAGTCTGAAACAAGTGCCCTTTTCTATAGTGAGATCCAAAAGGATCGGATACATATCCCTTTGTGGATATGAAGGATTAGCACGCAATGTCTTTCCTACCCTCATATGGTCGTGGATGTCGCCAACAACAAATTTTGTACCCAGTATTCAACCTTTTGGGAGCATGTCAACATCTGTAGTCTCTATGGATATTAAGGAAAATAATTTGGGTAAGCTATTATCAAAGCTTAGTGAATTTTCAAAACTTAGAAGTATTTGTGTGCAATGCGACTCAGATTTTCAACTAACTCAAGAATTAAGAAGAATTCTGGATGATTTATGCAACACAAATTTTGCTAAATTGGGTTCAACGATTGCATCACAAACTTCAGAAAATCCTATGGTATTTGATTTGATTGGAATGGGAAGCTACCACCAAGTCATCGATATGCTTAGCAAGAGCATATCAGAGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTTTTTCTCTTTTGTTTCATGATACAGGGCTTGAGAACTCAAAGTTTGAGTGATGTTTTCCTTCCATGTGATAATTATCCTTATTGGTTGGGGTATATAGGGGAAGGAAATTCAATACCTTTTCAAGTTCCACATGATAGTGATTGTCGCATGAAGGGAATTACTTTGTGTGTTGTTTACCCATCAACCCTTGAAATCATGGCAACTGAAAGTCTTACTAGTGTCTTCATCATTAATTACACAAAGTGTACCATTCAGATATACAAGCAAGCAACAACAATATCCTTTAATGATGAAGATTGGCAGGGCGTAATATCAAATCTAGGACCTGGTGACAATGTGGAGATTTTTGTAGCTTCTGGACATGGAAGTACTGTCAAGAAAACAGCTATCTATCTAATATATGGTCAGTCATTTACAATGAAAATGGAGCCATCAATCAATGTGGAAATTGAGCCATCACCTAAAGTGAGTGCGCAATCATCACCTAATGTAATAATGGAGCCACCCGTTACCGTCCAAATGGAGCCATCAAAGAAGCCAAAGAAAAATATCTCTACAATACTTAAAAAGAAAATGGGAGTATGTTTGTTGTCTTCTTCATCTAACTCTCAGTGGATCCACGACGTGTTCCTCAATTTCCGAGGAGAAGACACGCGCAGGAACTTCGTTTCTCATCTCTACGCGGCGCTGTGTAACGCCGGAGTCAACACTTTCCTCGACGACGAGACGATCGAAAGAGGAACGCAGTTGGTTTCAGAAATATGGCGAGCAATAGAAGGTTCTAGAATATGCATTGTCGTTTTCTCCAAAACGTACGCGCAGTCTAGTTGGTGTCTTCAAGAAATGGTGAAGATCATGGACTGTCACCGAAGATTGGATCAGGTGGTTCTGCCCGTGTTTTATGACGTTGACCCCTCGCACGTGCGTCGTCACGGAGGTCCCTTTGGAGAAGCGTTGGAGGAACACGCGACACGATACCCGAGAGTGTCTCACTTCGTCGAGCTTTGCAGGAGAGCGTTTTCTGAAGCTGGGAATTTGGCTGGTTGGGATGTTAGGAAATGCAAGAATGAGAACAAGGTAGTGAATCAAATTGTTAATGCTGTCTTGGAAAAACTAGACATTTCAAACTTGCCTATAACAGACTATCCAGTTGGATTGGAATCACGTGTGCAAGATGTGATTCAATTTTTAGAAACAAGATCAACAAGTGTTTGTGTTGTAGGCATCTGGGGAATGGGAGGTATTGGTAAAACAACTATTGCCAAAGCCATCTACAATAAAATTCATCGCAATTTCACTGACAAAAGTTTCCTTAAAAATATTAGAGAAGTCTGGGAGAAAGATAGGGGACAAACTGATTTACAAGAACAACTTCTCTCAGATGTCCTTAAAATGAGAAAGATAAAGGTGCAAGGCATTGGAAGGGGGAAAGCTATGATTAGGGAAATGCTTAGCAGCAAAAGGGCACTTCTTGTTCTTGATGATGTGAATAATCCAGGAAGTGTAATAATTGTTACAACAAGAGATGTACGTCTACTCAGTGTCCTTAAAGTTGACTATTTCCATGAAATGAAGGAAATGGATGAAAATGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGGGAAGCAAGTCCAATAGAAGACTTCATTAATCTCTCAAGAAGTGTTATTGCTTATTGTGGAGGATTACCCCTGGCTCTTGAAGTCATTGGATCTTATTTGTATGAAAGGACGAAGAAAGAGTGGAAAAGTGTGTTGGAAAAATTAAAGAAAATTCCCGATGATCAAATACAAGAGAAGCTAAAAATAAGCTTTGATGGTTTACAGAATCATACAGAGAAGGAGATATTTCTTGACATTTGTTGTTTCTTCATTGGCAAGGACAGAGTCTATGTTACACAAATACTAAATGGTTGTGGGCTTCATGCTGAAATTGGAATCACAATCTTGATAGAGCGAAGCCTAATAAAAGTGGAAAAGAATAACAAACTTGGAATGCATGCTTTGCTTCGAGACATGGGAAGAGAAATTATTCGTGAAAGTTCACCTGAGAAGCCTGAGAAGCGTAGCCGACTGTGGGATCATGAGGATATAGTTGATGTATTGCGAGAAAATACTGGAACAGAGGATATTAAGGGATTGGCTTTGAAGTTGAAAGGAAATAGTAGAGTTTGCTTTGAAACCCATGCTTTTAAGGAAATGAAGAGATTGAGATTGTTACAACTTGATCACGTTCAACTCACGGGAGATTATGGATATATTTCTAGACAGCTCAGATGGATCAATTGGCAAGGTTTTACTTCAAAGTACATACCCAAAAGCTTTTATCAGCAAAATCTTGTTGTTTTTGAGTTAAAGCGAAATACTCTCAAAATAGTTTGGAATCATTCCAGGTACATTACAAACACTCCTGACTTTTCAAAGCTACCAAATCTCGAAAGGCTTATTATCAAGGATTGTCCAAGTTTACATAAGGTAGATGAGTCCATTGGAGATCTCCGCAGTTTAGTTCTGATAAATTTGAAGGACTGTACAAGCCTTAATAATCTTCCAAGAGTGATCTATAAGTTGAAATCTTTGAAAACTCTCATCCTTTCTGGTTGTTCAAAAATTGACAAGTTGGAAGAAGATATAGGACAGATGGAATCCTTGACAACACTAATAGCAGAAAATACTGCTGTTAAAAAAGTTCCTTTTTCAATAGTGAGATCCAAAAGCATTGGATACATATGTTTATGTGGATTTGAAGACTAGCACGTGATGTATTTCCATATCTCATTTGGTCTTGGATTTTCTATTGATGTGCAAAATTATAATTTAGGTGAAATATCACCAGTACTAAGTGATCTTTCAAAACTTAGAACTGTTAGGGTGCAATGCCGCTCAGAGTCTCAACTAACTCAAGAATTAAGAAGAATTATGGATGGCATATATGATGTAAGTTTCACTGAACTGGAGACCACGTCAGATGTGTCAACATCAGATACCTCAGAGTCAGAGCATTCCTTGAGATCTGTTTTGATTGGAATGGGAAGTTACCTCCAAGTCCTCAATACTCTTAGTGAGAGTATATCACAGGTTCCTTCTTCTTTCCTTACCTTTATTATGCATCTTTACAATTAA 5835 0.3823 MSSSSSSSKSKPQWIYDVFINFRGEDTRKSFVSHLYSALANAGINTFLDDEKLPKGNELKFELFRAIEGSQISIVVFSQNYIQSSWCLDELVKIVNCRALRGQVILPVFYDIIPSFLRDSTYISFKSFYTQDIGDHREELWKKALNQVANLGGWDVRNCINDNRVVKEIVDAVLKRLDRTYLSITDFPVGLESRVQHVIDFLRKKKKGACVFGIWGMGGIGKTTIAKSIFNEMRHEFNDKSFIENIREVWEKEWGQIDLQAQLLSDILKTRKMKVHSIDWGKAMIKETLCTKKVLVVLDDVNKFEQLDALCGNRNVVGPESVIIITTRDVRLLNVLEVDYVYGVEEMNGSESLELFSWHAFREANPIKGFLALSEQVIAYCGGLPLALEVLGSYLYKRKEEEWQSVLSKLKRIPNDRIQEKLKISFDGLTDYMEKDIFLDICCFFIGKDRAYVTEILNGCGLHADIGITVLVERSLIKVVKNNKLAIHDLVRDMGREIIRQSSPVEPEKRSRLWFHDDVYDVLTEHTVGLSLLPILELLIILDVLAIEGLALKFQITSRGCFTTNTFEDMKRLRLLLLDRVQLVGDYGHLPKHMRWVYWHGFSLKYLPDNFYQGNVVAIDIRHSYLKLVWKEPQLLERLKFLNLSHSMNLSKTPDFSKLPNLEKLILKNCPSLYEVHQSIGDLSNLSLLNLKGCTCLGNLPIIIYKLKSLKTLILSGCSKIDKLEEDIEQMESLTTLIADNTSLKQVPFSIVRSKRIGYISLCGYEGLARNVFPTLIWSWMSPTTNFVPSIQPFGSMSTSVVSMDIKENNLGKLLSKLSEFSKLRSICVQCDSDFQLTQELRRILDDLCNTNFAKLGSTIASQTSENPMVFDLIGMGSYHQVIDMLSKSISEVLSLSLSLSLLFLFCFMIQGLRTQSLSDVFLPCDNYPYWLGYIGEGNSIPFQVPHDSDCRMKGITLCVVYPSTLEIMATESLTSVFIINYTKCTIQIYKQATTISFNDEDWQGVISNLGPGDNVEIFVASGHGSTVKKTAIYLIYGQSFTMKMEPSINVEIEPSPKVSAQSSPNVIMEPPVTVQMEPSKKPKKNISTILKKKMGVCLLSSSSNSQWIHDVFLNFRGEDTRRNFVSHLYAALCNAGVNTFLDDETIERGTQLVSEIWRAIEGSRICIVVFSKTYAQSSWCLQEMVKIMDCHRRLDQVVLPVFYDVDPSHVRRHGGPFGEALEEHATRYPRVSHFVELCRRAFSEAGNLAGWDVRKCKNENKVVNQIVNAVLEKLDISNLPITDYPVGLESRVQDVIQFLETRSTSVCVVGIWGMGGIGKTTIAKAIYNKIHRNFTDKSFLKNIREVWEKDRGQTDLQEQLLSDVLKMRKIKVQGIGRGKAMIREMLSSKRALLVLDDVNNPGSVIIVTTRDVRLLSVLKVDYFHEMKEMDENESLELFSWHAFREASPIEDFINLSRSVIAYCGGLPLALEVIGSYLYERTKKEWKSVLEKLKKIPDDQIQEKLKISFDGLQNHTEKEIFLDICCFFIGKDRVYVTQILNGCGLHAEIGITILIERSLIKVEKNNKLGMHALLRDMGREIIRESSPEKPEKRSRLWDHEDIVDVLRENTGTEDIKGLALKLKGNSRVCFETHAFKEMKRLRLLQLDHVQLTGDYGYISRQLRWINWQGFTSKYIPKSFYQQNLVVFELKRNTLKIVWNHSRYITNTPDFSKLPNLERLIIKDCPSLHKVDESIGDLRSLVLINLKDCTSLNNLPRVIYKLKSLKTLILSGCSKIDKLEEDIGQMESLTTLIAENTAVKKVPFSIVRSKSIGYICLCGFED*HVMYFHISFGLGFSIDVQNYNLGEISPVLSDLSKLRTVRVQCRSESQLTQELRRIMDGIYDVSFTELETTSDVSTSDTSESEHSLRSVLIGMGSYLQVLNTLSESISQVPSSFLTFIMHLYN* 1945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0321 1943 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Apr10g0321 1943 SMART till_3 15 151 IPR000157 GO:0007165
Apr10g0321 1943 SMART till_3 1109 1246 IPR000157 GO:0007165
Apr10g0321 1943 Gene3D Ribonuclease Inhibitor 1608 1942 IPR032675 -
Apr10g0321 1943 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 1037 - -
Apr10g0321 1943 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1112 1929 - -
Apr10g0321 1943 SUPERFAMILY "Winged helix" DNA-binding domain 1499 1606 IPR036390 -
Apr10g0321 1943 SUPERFAMILY Toll/Interleukin receptor TIR domain 1100 1252 IPR035897 -
Apr10g0321 1943 PRINTS Disease resistance protein signature 1759 1775 - -
Apr10g0321 1943 PRINTS Disease resistance protein signature 1464 1478 - -
Apr10g0321 1943 PRINTS Disease resistance protein signature 1386 1400 - -
Apr10g0321 1943 PRINTS Disease resistance protein signature 1309 1324 - -
Apr10g0321 1943 ProSiteProfiles TIR domain profile. 1108 1275 IPR000157 GO:0007165
Apr10g0321 1943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 441 IPR027417 -
Apr10g0321 1943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1524 IPR027417 -
Apr10g0321 1943 Pfam NB-ARC domain 1290 1496 IPR002182 GO:0043531
Apr10g0321 1943 Pfam NB-ARC domain 192 416 IPR002182 GO:0043531
Apr10g0321 1943 SUPERFAMILY L domain-like 575 831 - -
Apr10g0321 1943 Gene3D - 347 430 IPR042197 -
Apr10g0321 1943 Gene3D - 1429 1513 IPR042197 -
Apr10g0321 1943 SUPERFAMILY L domain-like 1620 1864 - -
Apr10g0321 1943 Gene3D - 182 341 IPR027417 -
Apr10g0321 1943 Gene3D - 1272 1423 IPR027417 -
Apr10g0321 1943 SUPERFAMILY "Winged helix" DNA-binding domain 417 523 IPR036390 -
Apr10g0321 1943 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 1037 IPR044974 GO:0006952
Apr10g0321 1943 Gene3D - 10 181 IPR035897 -
Apr10g0321 1943 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Apr10g0321 1943 Pfam TIR domain 1110 1276 IPR000157 GO:0007165
Apr10g0321 1943 Pfam TIR domain 16 185 IPR000157 GO:0007165
Apr10g0321 1943 Gene3D Ribonuclease Inhibitor 564 874 IPR032675 -
Apr10g0321 1943 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1112 1929 IPR044974 GO:0006952
Apr10g0321 1943 Gene3D - 1106 1271 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0321 Apr-Chr10 7711885 7728525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0321 16 774 WRKY Transcription Factor Family AT4G12020 29.588 4.26e-76 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0321 - - aprc:113850721 3766.08