Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0320 ATGTCTTCTTCATCGACTAAGTCGAATCCCCAAATGATTCACGACGTGTTCCTGAGTTTCAGAGGGGAAGACACGCGCAGCAACATCGTTTCTTACCTCTATTCTTCACTCTCAAATGCAGGAATAAACACTTTTTTTGACGATAATATCATCAAAGGACAAAGATTGTATCAGGAGCTGTGGCGAGCAATTGAAGGGTCCAAGATATCTATCGTTGTCTTCTCGAAGAACTATGCTGAGTCTAGTTGGTGTCTTGAAGAATTGGAGAAAATCATGGAATGTCACAGGAATATGGGTCAGGTGGTTATACCCATATTTTACTATGTTGATCCGTCCGATGTAAGAAAACAAAAGGGTAGTTTTGGAGAAGCCTTGGAAAGACTTGCAGAAATGTATTCACGGATGACAGATGAGTTGTTTCGTTGGACAATTGCACTCACCGAAGCTGCTAATTTGGCAGGTTGGGATGTCAAGAATTCCAGGAGCGAAAGCCAAGTAGTGATGGAAGTTGTTAATTTTGTAATGACAAACCTAAACAACACATTATTGTCTATTACGGATTTCCCAGTTGGATTAGAATCTCGTGTGCAACATGTGACTCAATTTTTGGAGCAACAGTCAAGCACAGTTTGTATAGTAGGGATTTGGGGAATGGGTGGACTGGGAAAAACAACCATAGCCAAAGCTATCTACAATGAAATCCATCTCAAATTTGGAGATAGGTGTTTCCTAGAAAATATTCGAGAAGTTTGCAAGGACGATAAAGGTCAAATCCATTTACAAGAACAACTTCTTTCAGATATCTTGAAAACAAAGGTGAAGATACATAGCATTGCAATGGGGATAACTACAATCGAGAAAAGACTTTGTGGTAAGAGGGCGCTCATTGTACTTGATGATGTAACTAAGTTTGAGCAATTAAAATCCCTATGTGGAAATTGTAAATGGATTGGTCAAGGAAGTGTAATAATCATTACAACAAGAGATGTGCGCTTACTTAAAGTACTTAAAGTTGATTATGTCTATAAAATGGAAGAAATGGATGAAAATGAGTCACTTGAGCTTTTTAGTTGGCATGCCTTCAGGGAAGCAAGTCCAAGAGAAGACTTCACTGAACTCTCAAGAAATGTAGTTGCTTATTGTGGAGGACTACCACTAGCTCTCGAAGTCCTTGGATCTTATTTATTTGAGAGGACTGAACAAGAGTGGAAAAGTGTACTGTCAAAGCTAGAAACAAATCCCAATGATCAAGTTCAAGAGAAATTAAGAATAAGCTTTGACGGTTTAAGGGATCAAATGGAAAAAGATATATTTCTTGACATATGCTGCTTCTTTATTGGTAAAGATAGAGCCTATGTTACAGATATTCTAAATGGTTGTGGACTCCATGCTGATATTGGAATAACTGTTCTCATAGAGCGGAGCCTCATCAAAATTGAAAAGAATAACAAACTTGGAATGCATGATTTATTGCGTGACATGGGAAGAGAGATTGTTCGTGAAAGTTCAACAAAAGAACCTGAGAAGCGTAGCCGATTGTGGTTTCATGAGGACGTAATTGATGTATTAACAAAAAATACTGGGACAGAAGCTATTGAAGGGTTGTCTTTGAAGTTGCACGGTACTGGCAGAGATTGCTTTAATGTTAGTGTTTTTGAGGAAATGAAGAGATTGAAACTGTTGCAACTCCATCATGTGCAACTTGCTGGAGATTATGCATATCTTTCTAAGCAGCTGAGATGGGTCTCTTGGCAAGGATTTCCTTTAAAATACATACCTGACAACTTTTATCAGGGAAATGCTGTTGCGATTGACTTAAAACATAGCAATATTAAACTAGTCTGGAAGCAGCCACAGTTGCTGAGGTGGCTAAAAATCCTCAATCTTAGTCATTCCAAGTACTTGACAATAACACCTGACTTTTCAAATCTACCAAATCTTGAAAAGCTTATTCTCAAAGATTGTCCAAGTTTGTTCAAGGTGCACGATTCCATTGGAGATCTCCGCAGTCTTCTGCTGATAAATTTGAAGGACTGTAGAAGCCTTAGGGGTCTCCCATGTGTAATGTATAAAATGAAATCTGTGAAAACTCTTATCCTTTCTGGCTGTTCAATGATTGACAAATTAGAAGAAGACATAGTGCAGATGGAATCCTTGACTACTCTAATTGCAGAAAATACTGCTGTGAAACAAGTGCCATTTTCCGTAGTCAGATCAAAAAGCATTGGATATATATCCCTATGTGGATATGAAGGCTTATCACGCGATGTTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACAATGGATCCTCTCTCTTGCATTCACCCTTTTAGAGTCATGCCATCGTCGCTTGTTTCTATTTATTTACAAAATAATTATTCGAGGGATCTGTCACCAATGCTTAGCATCCTTTCAAAACTTCGAAGTGTTTGGGTGCAATGTGAGACAGAGATTCAACTATCTAAAGGGTTGAGAACAATTCTGAATGATGTGTATGGTGTAGATTATACTGAACTAGAAACATCAAACACATCAGAAATCACAAAATACTCCTTGAGGTCTTATTTGGTCGGAATGGGAAGTTACCAAGAAGTCTTCAATACTCTCAGCAAAAGCATATCAGAGGGATTGACTAACAATGAGCCGTGTGATGTTATTCTCCCGGGTGACAATTATCCATATTGGTTGGCCCACACAGGTGAAGGACATTCAGTGTTTTTCATAGTCCCTCAAGATAGTTGTAATCGTATGAAGGGAATGACTGTGTGTGTTGTTTATTCATCACCCCCTGAAAACATGGCAGCTGAATATCTTATTAGTATCATGATTGTTAATTACACAAAGTGCACCATCCAGATATTTAAGCGAGACACAGCAATTTCTTTCAATGATGAAGATTGGCAAGGCATAGTATCACATCTAGGATCTGGTGACAACGTGGAGATTTTTGTTAATTTTGGTCACGGATTGTTTGTCAAGAAGACAGCTCTCTATCTAATGTATAACGAGTCAACTGACGTGAAAGTAGAGCCTTCTCCCAAGCCAAAGAAAAATGCCTTTGTAGGAATCATAAAGAAGTTCATATCGTGTATGAATCAATCGTAG 3111 0.3841 MSSSSTKSNPQMIHDVFLSFRGEDTRSNIVSYLYSSLSNAGINTFFDDNIIKGQRLYQELWRAIEGSKISIVVFSKNYAESSWCLEELEKIMECHRNMGQVVIPIFYYVDPSDVRKQKGSFGEALERLAEMYSRMTDELFRWTIALTEAANLAGWDVKNSRSESQVVMEVVNFVMTNLNNTLLSITDFPVGLESRVQHVTQFLEQQSSTVCIVGIWGMGGLGKTTIAKAIYNEIHLKFGDRCFLENIREVCKDDKGQIHLQEQLLSDILKTKVKIHSIAMGITTIEKRLCGKRALIVLDDVTKFEQLKSLCGNCKWIGQGSVIIITTRDVRLLKVLKVDYVYKMEEMDENESLELFSWHAFREASPREDFTELSRNVVAYCGGLPLALEVLGSYLFERTEQEWKSVLSKLETNPNDQVQEKLRISFDGLRDQMEKDIFLDICCFFIGKDRAYVTDILNGCGLHADIGITVLIERSLIKIEKNNKLGMHDLLRDMGREIVRESSTKEPEKRSRLWFHEDVIDVLTKNTGTEAIEGLSLKLHGTGRDCFNVSVFEEMKRLKLLQLHHVQLAGDYAYLSKQLRWVSWQGFPLKYIPDNFYQGNAVAIDLKHSNIKLVWKQPQLLRWLKILNLSHSKYLTITPDFSNLPNLEKLILKDCPSLFKVHDSIGDLRSLLLINLKDCRSLRGLPCVMYKMKSVKTLILSGCSMIDKLEEDIVQMESLTTLIAENTAVKQVPFSVVRSKSIGYISLCGYEGLSRDVFPSLIWSWMSPTMDPLSCIHPFRVMPSSLVSIYLQNNYSRDLSPMLSILSKLRSVWVQCETEIQLSKGLRTILNDVYGVDYTELETSNTSEITKYSLRSYLVGMGSYQEVFNTLSKSISEGLTNNEPCDVILPGDNYPYWLAHTGEGHSVFFIVPQDSCNRMKGMTVCVVYSSPPENMAAEYLISIMIVNYTKCTIQIFKRDTAISFNDEDWQGIVSHLGSGDNVEIFVNFGHGLFVKKTALYLMYNESTDVKVEPSPKPKKNAFVGIIKKFISCMNQS* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0320 1036 Pfam TIR domain 14 187 IPR000157 GO:0007165
Apr10g0320 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Apr10g0320 1036 Gene3D Ribonuclease Inhibitor 545 859 IPR032675 -
Apr10g0320 1036 PRINTS Disease resistance protein signature 212 227 - -
Apr10g0320 1036 PRINTS Disease resistance protein signature 288 302 - -
Apr10g0320 1036 PRINTS Disease resistance protein signature 381 395 - -
Apr10g0320 1036 PRINTS Disease resistance protein signature 690 706 - -
Apr10g0320 1036 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1002 IPR044974 GO:0006952
Apr10g0320 1036 SUPERFAMILY L domain-like 487 814 - -
Apr10g0320 1036 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Apr10g0320 1036 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 1002 - -
Apr10g0320 1036 Gene3D - 182 341 IPR027417 -
Apr10g0320 1036 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 155 IPR035897 -
Apr10g0320 1036 Gene3D - 346 430 IPR042197 -
Apr10g0320 1036 Pfam NB-ARC domain 193 420 IPR002182 GO:0043531
Apr10g0320 1036 SMART till_3 13 152 IPR000157 GO:0007165
Apr10g0320 1036 Gene3D - 8 181 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0320 Apr-Chr10 7686273 7694480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0320 14 759 WRKY Transcription Factor Family AT4G12020 30.114 5.06e-82 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0320 - - gmx:100815297 1456.43