Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0314 ATGGAGGAACACATTCCATTTGCTGTTGCTTCTAATCTCATTCACAGGTTGGCTTCCGCAGATTTTATTGAATTTGGAAAGGAGTATGATGTGATGGAAGAGTTGGAAGAGCTCAAGAACACAATTGAATCCATCAATGATGTGCTCCTTGATGCTGACGATAAACAAGAGCAAGGTCATGTGCGAGTTTGGATTAGAAGGTTCAAAGAAGTACTTCATCATGCAGATGACTTCTTAGATGACCTTGCTATCCAATTTAGTAGGGACAAATTGGATGCAGCAGAAGGAAAAGAAGTAATCAAGGTACTTTCCATTTCATCTTCAAATCAAATTCCTTTATACAGTGAAATGCCTGACAAAATTATAGAAATACAAGCAAGTTTTAATGGTGTAGTAAAAGAAATGAAGGATTTGAATTTAAGTCCAAGATCAGGAGTGGTTAAGCAAACTAATAGTGAATGGAGGGAAACATGTCCTTTTGTATTAGAATCAGATATCATTGGAAGAGATGATGATAAAAAGAAGATTATTAGTCTGTTGAGACAACCGCCACATGAAAAGAAGAAAGTTTCTGTGATTGCTATTGTTGGCCTTGGTGGATTGGGGAAGACAGCTCTTGCACAATTGGTGTATAATGACTTGGAAGTGCAGAAAATTTTTGAAATGCAAATGTGGGTTAATGTCTCTGATAACTTTGATGTCAAAACTATTATGAAGAAAATACTAGAATCAATTACTGGTGACCAAATTGAAGACAAGTTATCATTAGGCAACTTGCAAAGCAAACTTCGTGAAAAAATAGAAGGTAAAAAATATTTATTAGTCCTGGATGACGTTTGGAATGAGAGGCATGACAAATGGGCTGAGTTGAGAAATTATTTGATGTGTGGCGCTCAAGATAGTAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAAGGGAATGACTGCTAGCACTTCCTATCCTTTGAAAGGTTTGACTGACGAAGTATCTTGGAGTTTGCTGAAGAACATTGCATTTGAGGATGATTCCAAAGGAGTGAATCAAAATCTAGAATCAATGGGAAAAGAAATAGCCAAGAAATGTCAAGGGGTTCCCTTGGCGGTTAGAACGCTGGGAGGCCTGTTACGAGGACAAAATGAAGAAAGTGAATGGGAGAATGTTTTACGTGGTGACTTCTGGAAATTATGTGAAGAACAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCACATCTTGTCACAAGAAATGAAACAATGTTTTGCTTATTGCTCTTTATATCCCATGGATTCAGAAATTCCAAAGGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCAACAGGAAAACAGAACATGGAAGATATTGGTAACGAATTTGTAAAGATATTTTTGAGGAACTCATTTTTTCAAGATGCAAAAGGTGATAAATACGGTGAGATCATTAGTTTCAAAATGCATGATTTAATTCGTGATCTTGCAATGCTTGTTGCTGGCAATGATTATTGTTACTTGGACAGTAAGGCAGAAAAAGTTGAAGGGAGACCCATGCACGTATCATTGGAATCTGGGGCCATTCATTTATTGGATTCGTTGGATCAAAGTAGGTTGCGAACTTTGATTTTGCGGTCTTCTTGTTATCAGAAGGAATTGTCTGTTGCAAATTTCAAGTACTTACGCGTCTTGAGAACGCCGCCACATTACATTTTTGAGTTGTGTGCTTCAATTGAAAATTTCAAGCATTTAAGATACCTTGATTTGGTTCATAAGTTTTATTACGGATCAATACAAATAAGTCTTCCCGAATCTATAAGCAATCTTGTTTTCTTACAAACATTAAAATTGGATGAATTCGATGAAGAATCATTTTCAGTAGTCACAAAACTAGTCAATTTGAGATGGCTTGAAGTTGATTATGACTCCTTGAGTGGGATGTCAGTTGGATTGGGAAAATTATCCTCCTTGCAATTCTTACCGACCTTTGTTGTGAGAGAGAGCCAAAAAACAAAACATGGCACACTAAACGAATTGAAGGACTTGAACCTAAGTGGCAAACTAGAAATCAAGCATCTTCGTCGTGTCAGAGACGTGGGTCTGGAATCACGTGATTTATTAGAAAACCTTGAGCCCCACCATAATCTTAAGCAGTTGAATGTGTTGCATTATCCAGGCACGCTTTTCCCGAACTGGCTCTCTCTCCTCACAAATGTTGTGGACATGTTTCTCTTTGGGCTTTATAATTGCTGCTGTCTCCCACCGTTGGAACGTCTTCTGTCTCTGAAGTCACTTGAGATAAAATATCTTCATGAATTGGAATACGTATATCTTTACGAAGATGGTTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAGTCTCGTATTAGAGAATTGTCGGAAGCTTAGGGGATGGCGGATGCGGGGAGATGAAATCAATGATTCACATAATCTGTCCTTACCTCTTTCATTTCCTCATCTTTCTCAACTACAAATCTATAAGTGTCCAACGTTGACTTACATGCCTACTTTTCCGAGGGTTAAGGTTTTACATTGGCCTGAAGGCAGCGTGGAGCCATTGACAGCAACACTAAACACAACAGCGTCAACATGTTCAGCTGACTCATCTTCCTCCGCTGCTCCTCTTTCCATGCTCAAACATTTGAGGATTTATGATCCTAGGAATTTGCCAAAGGGTTGGATGCAAAATCTGGCTTCTCTCGAGTCCCTTGAAATTGGATGGTATGAAACTGAAACACTCGAGGAATTTGAAATTGAGTTTAAAGACGACACCAACTGCCTTCCTTCTCTGCGACGAATTTCATTATATGATTGTCAAAGGCTGAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGGAGATCAAAATCTCATACTGCCCAATATTGGCATCGCTGCCCGAAGGAATGAGTCGTCTTGCCAACTTAAAGATCTTCGAAGTTATTAGTTGTTTCCTCCTAATGAAAGAATGCAGAAAAGAGACAAGTGCTGTTAGCCGTCAAATCGCACACATCCCACGAATTATCCTTCGTAATTAG 3078 0.3866 MEEHIPFAVASNLIHRLASADFIEFGKEYDVMEELEELKNTIESINDVLLDADDKQEQGHVRVWIRRFKEVLHHADDFLDDLAIQFSRDKLDAAEGKEVIKVLSISSSNQIPLYSEMPDKIIEIQASFNGVVKEMKDLNLSPRSGVVKQTNSEWRETCPFVLESDIIGRDDDKKKIISLLRQPPHEKKKVSVIAIVGLGGLGKTALAQLVYNDLEVQKIFEMQMWVNVSDNFDVKTIMKKILESITGDQIEDKLSLGNLQSKLREKIEGKKYLLVLDDVWNERHDKWAELRNYLMCGAQDSKILVTTRSENVAKGMTASTSYPLKGLTDEVSWSLLKNIAFEDDSKGVNQNLESMGKEIAKKCQGVPLAVRTLGGLLRGQNEESEWENVLRGDFWKLCEEQDSIMPILKLSYHILSQEMKQCFAYCSLYPMDSEIPKDELIQLWMAQGYLKCSTGKQNMEDIGNEFVKIFLRNSFFQDAKGDKYGEIISFKMHDLIRDLAMLVAGNDYCYLDSKAEKVEGRPMHVSLESGAIHLLDSLDQSRLRTLILRSSCYQKELSVANFKYLRVLRTPPHYIFELCASIENFKHLRYLDLVHKFYYGSIQISLPESISNLVFLQTLKLDEFDEESFSVVTKLVNLRWLEVDYDSLSGMSVGLGKLSSLQFLPTFVVRESQKTKHGTLNELKDLNLSGKLEIKHLRRVRDVGLESRDLLENLEPHHNLKQLNVLHYPGTLFPNWLSLLTNVVDMFLFGLYNCCCLPPLERLLSLKSLEIKYLHELEYVYLYEDGFAVTFFPSLESLVLENCRKLRGWRMRGDEINDSHNLSLPLSFPHLSQLQIYKCPTLTYMPTFPRVKVLHWPEGSVEPLTATLNTTASTCSADSSSSAAPLSMLKHLRIYDPRNLPKGWMQNLASLESLEIGWYETETLEEFEIEFKDDTNCLPSLRRISLYDCQRLKALPDWICNLSSLQEIKISYCPILASLPEGMSRLANLKIFEVISCFLLMKECRKETSAVSRQIAHIPRIILRN* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0314 1025 Gene3D - 150 322 IPR027417 -
Apr10g0314 1025 SUPERFAMILY L domain-like 491 847 - -
Apr10g0314 1025 Pfam Rx N-terminal domain 11 94 IPR041118 -
Apr10g0314 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 426 IPR027417 -
Apr10g0314 1025 PANTHER OS05G0414200 PROTEIN 33 896 - -
Apr10g0314 1025 SUPERFAMILY RNI-like 793 999 - -
Apr10g0314 1025 PANTHER DISEASE RESISTANCE PROTEIN RP 33 896 IPR044974 GO:0006952
Apr10g0314 1025 PRINTS Disease resistance protein signature 192 207 - -
Apr10g0314 1025 PRINTS Disease resistance protein signature 266 280 - -
Apr10g0314 1025 PRINTS Disease resistance protein signature 363 377 - -
Apr10g0314 1025 PRINTS Disease resistance protein signature 790 806 - -
Apr10g0314 1025 Gene3D - 326 411 IPR042197 -
Apr10g0314 1025 Coils Coil 35 55 - -
Apr10g0314 1025 Gene3D - 412 501 IPR036388 -
Apr10g0314 1025 Pfam NB-ARC domain 171 412 IPR002182 GO:0043531
Apr10g0314 1025 Gene3D - 10 111 - -
Apr10g0314 1025 Gene3D Ribonuclease Inhibitor 864 1016 IPR032675 -
Apr10g0314 1025 Gene3D Ribonuclease Inhibitor 672 855 IPR032675 -
Apr10g0314 1025 Gene3D Ribonuclease Inhibitor 518 665 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0314 Apr-Chr10 7567370 7573389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0314 190 450 WRKY Transcription Factor Family AT5G45050 25.746 3.48e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0314 - - aprc:113850108 1376.3