Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0312 ATGGCGGAACACATTCCATTTGCTGTTGCGTCTAATCTCATTCACAGGTTGGCTTCCGCAGATTTTATTGAATTTGGAAAGAAGTATGATGTGATAGAAGAGTTGGAAGAGCTCAAGAACACAATTGAATCCATCAATGATGTGCTCCTTGATGCTGACGATAAACAAGAGCAGGCTCGTGTGCGAGTTTGGATTAGAAGGTTCAAGGAAGTACTTCATGTTGCAGATGACTTCTTAGATGACCTTGCTATCGAATTTATGAGAAACAAATTGGACGAGGAACGAGGAACAGAAGTGACAAAGGTACTTTATCCTTTCTCATCTTCAAATCGAATTGATTTTCCCATTCAAATGGCTGAAGAAATTAAAAGAACACGAGAAAGTTTTGATGCTGTAGTAGAAGACATGTATAAATTGAATTTATGCCCAAGATCGATGGTGGTTAAGCAAACTGATAATGGATGGAGGGAAACATGTTCTTTTGTGTTAGAATCAGATATCATTGGAAGAGATGAGAGTAAAAAGGAGATTATTAATCTGTTGAAACACCCTAATGAAAACCAAAAAATTTCTGTGATTGCCATTGTTGGCCTTGGTGGTTTGGGGAAGACGACTCTTGCACAATTGGTGTATAACGACTTCGAAGTGCAGACTTTTTTTGAAATGCAAATGTGGGTTTGTGTCTCTGATAACTTTGATGTCAAAACTATTCTGAAGAAAATATTAGAATCAATTACAGGTGACCAAGTTGAAGACAAGTTATCATTAGGCAACTTGCAAAGAAAACTTCACGAACAAATAATTGGTAAAAAAATTTTGTTGGTCCTGGATGACATTTGGAATGAGAAACATGACAAATGGGTTGAAGTGAGAAAGTACTTGATGTTTGGCGCTCAAGATAGCAAGATTTTAGTTACAACTCGAACTGAAAATGTAGCAAAAGCCATGTCTGCTAGCACTTCCTATCCTTTGAAAGGTTTGACTGACGAAGAATCTTGGAGTTTATTGAAGAAAATTGCATTTGAGGATGATTCCAAAAGAGTGAATCAAAATCTAGAATCAATGGGGAAAAAAATAGCCAAAAAATGTAAAGGGGTTCCGCTAGCAGTTAAAACGCTGGGAGGCCTGTTACGAGGACAGAATGAAGAAAGTGAATGGGAGAATGTTTTATGTGGTGACCTGTGGAAATTATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGCTACCGAAAATTGTTTCCTGAAATGAGACAATGTTTTGCTTATTGCTCTTTATATCCTAAGGATTCAGATATTCCAAAAGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCAACTGAAAAACAACACATGGAGGATGTGGGTAATCAATTTGTAAAGATGTTTTTGATGAACTCATTTTTTCAAGATGCAGAAAGTGATGAATATGGTGAGATCTATAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCTGGTAGCTGGCAGTGATTATTGTCACTTGGATAGCAAGGCAGAAAAAGTTGAAGGTAGACCCATGCACGTATCATTGGAATCTGGGGCCATTCATTTATTGGATTCATTGGATGCAAACAGGCTGCGAACTTTGATCCTGTGGTCTTACGACAAGGAGGAGTTGTCTGTTGCAAATTTCAAATACTTGCGAGTCTTGAAGATGTCATCTTCTTCTTCTTCTTGCAAACTGTTTGATTCTGTAAAATTGAAGCATTTAAGATATCTTGATGTTGATGATTACTCCAGGATGACAGTTGGGTTGGGAAAATTGTGCTTTTTGCAGTTCTTACCAACCTATATTGTGGGGGATAGCCAAGAAACAAAATATGGCACACTAAGTGAATTGAAAGACTTAAACTTAAGGGGAGACTTAACAATTGCTTATCTCGATCGTGTGAGAGATGTGGCTCTGGAATCACAAGACGTAAATTTAAAAGAAAAAAAATTCCTTCAATCCTTGACTCTAACTTGGTGGCTTGAAGACATCCACAGAAGTGACAACTTACAATCGTTCAAAAGTGACAGCTTACAATTGTTAGAAAACCTTCAACCCCACCATAATCTTAAGCGATTGGAAGTGATTGGTTATCCAGGGGTGCTTTTCCCAGATTGGCTTTCTCGCCTCACAAATGTTGTTCACATCTCTCTTCGTGGCCTTTATAATTGCCCCTGTCTCCCACCGATGGAACGTCTACCGTACCTTAAGTCACTTCTGATGGACTCTTTTCATGAATTGAAGTACATACATCATCATGAAGATGGTTTTGCAGCAACCTTCTTCCCCTCTTTGGAGAGCCTCACGTTAAATAGTTGTGACAAGTTTACGGGATGGCGGAGGCGGGGAGATGATATTAATGATTATAAGAATTCACATCATCTCTCCTCTCTTTCGTTTCCTCGTCTTTCTGAACTATATGTCTCTTTCTGTCCAGAATTGACTTGCATGCCTACTTTCCCAAAAGTTAAAGTTTTAGAATGTTGTCGATGCAGTGTGGAGCCACTAACAGCAACACTAAACACACAATCAACATTTTCAGCTGACTCATCTTCCTCCTTTACTCCTCTTTCCACGCTCAAAAAATTGATCACATCTGATGTAAACGTAAAAGCGTTGCCAAAGGGTTGGATGCAAAATCTGACTTCTCTCGATTCTCTTCTAATTGCAAGCAGTCAGAGTGAAACACTAGAGGAATTTGAAACTGGGTTTAAGGACGACACCAACTGCCTTCCCTCTCTGCAAAAAGTATCCATAACAGTATGTGTAAACCTAAAGGCTTTGCCAAACTGGATTTGCAAACTCCCATCGCTTCAGCATATCGAGATCAGCGATTGCCCAAAATTGGCATCGCTGCCCAATGGAATGAGACGTCTTTCCAACTTAAAGATCTTTGAGGTCAACTTTTGTTCCCTCTTAATTAAAGAATGCCGAACAAAGACAAGTGTTGTTAGTCGCCAGATCGCACACATCCCACAGATTATCCTTCGTGATGAGATATTATTATAA 3048 0.3875 MAEHIPFAVASNLIHRLASADFIEFGKKYDVIEELEELKNTIESINDVLLDADDKQEQARVRVWIRRFKEVLHVADDFLDDLAIEFMRNKLDEERGTEVTKVLYPFSSSNRIDFPIQMAEEIKRTRESFDAVVEDMYKLNLCPRSMVVKQTDNGWRETCSFVLESDIIGRDESKKEIINLLKHPNENQKISVIAIVGLGGLGKTTLAQLVYNDFEVQTFFEMQMWVCVSDNFDVKTILKKILESITGDQVEDKLSLGNLQRKLHEQIIGKKILLVLDDIWNEKHDKWVEVRKYLMFGAQDSKILVTTRTENVAKAMSASTSYPLKGLTDEESWSLLKKIAFEDDSKRVNQNLESMGKKIAKKCKGVPLAVKTLGGLLRGQNEESEWENVLCGDLWKLCEEQDSIMPILKLSYRKLFPEMRQCFAYCSLYPKDSDIPKDELIQLWMAQGYLKCSTEKQHMEDVGNQFVKMFLMNSFFQDAESDEYGEIYSFKMHDLMHDLAMLVAGSDYCHLDSKAEKVEGRPMHVSLESGAIHLLDSLDANRLRTLILWSYDKEELSVANFKYLRVLKMSSSSSSCKLFDSVKLKHLRYLDVDDYSRMTVGLGKLCFLQFLPTYIVGDSQETKYGTLSELKDLNLRGDLTIAYLDRVRDVALESQDVNLKEKKFLQSLTLTWWLEDIHRSDNLQSFKSDSLQLLENLQPHHNLKRLEVIGYPGVLFPDWLSRLTNVVHISLRGLYNCPCLPPMERLPYLKSLLMDSFHELKYIHHHEDGFAATFFPSLESLTLNSCDKFTGWRRRGDDINDYKNSHHLSSLSFPRLSELYVSFCPELTCMPTFPKVKVLECCRCSVEPLTATLNTQSTFSADSSSSFTPLSTLKKLITSDVNVKALPKGWMQNLTSLDSLLIASSQSETLEEFETGFKDDTNCLPSLQKVSITVCVNLKALPNWICKLPSLQHIEISDCPKLASLPNGMRRLSNLKIFEVNFCSLLIKECRTKTSVVSRQIAHIPQIILRDEILL* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0312 1015 Gene3D - 326 411 IPR042197 -
Apr10g0312 1015 SUPERFAMILY RNI-like 773 986 - -
Apr10g0312 1015 PANTHER OS05G0414200 PROTEIN 34 837 - -
Apr10g0312 1015 Gene3D - 10 114 - -
Apr10g0312 1015 SUPERFAMILY L domain-like 476 850 - -
Apr10g0312 1015 Gene3D - 412 501 IPR036388 -
Apr10g0312 1015 PANTHER DISEASE RESISTANCE PROTEIN RP 34 837 IPR044974 GO:0006952
Apr10g0312 1015 Coils Coil 35 55 - -
Apr10g0312 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 426 IPR027417 -
Apr10g0312 1015 Pfam Rx N-terminal domain 11 94 IPR041118 -
Apr10g0312 1015 PRINTS Disease resistance protein signature 192 207 - -
Apr10g0312 1015 PRINTS Disease resistance protein signature 266 280 - -
Apr10g0312 1015 PRINTS Disease resistance protein signature 363 377 - -
Apr10g0312 1015 PRINTS Disease resistance protein signature 970 986 - -
Apr10g0312 1015 Gene3D Ribonuclease Inhibitor 853 998 IPR032675 -
Apr10g0312 1015 Gene3D - 157 322 IPR027417 -
Apr10g0312 1015 Gene3D Ribonuclease Inhibitor 528 847 IPR032675 -
Apr10g0312 1015 Pfam NB-ARC domain 171 413 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0312 Apr-Chr10 7369962 7373795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0312 190 387 WRKY Transcription Factor Family AT5G45050 27.885 1.50e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0312 - - aprc:113850108 1347.03