Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0309 ATGTCTGCTTCATCCTCAAATCCAATATGGATATACGACGTGTTCCTCAATTTCAGAGGAGAAGATACACGTAGAACCATAGTTTCTCATCTCTACAATGCACTCTTAAATGCTGGAGTCAACACTTTCATGGACGATCACAAGCTTCCAAAGGGAACAGAGTTGCAACCAGAACTACTCCAAGTAATAGAAGGGTCTCATATATCAATCGTTGTTCTCTCCAAAGGTTATGTTCGGTCTGCGTGGTGTCTTAATGAACTTGAACAAATCATGCAGTGTCGTGCCACTTATGGACAAGTGGTTCTGCCTATATTTTACGATGTTGACCCTTCTGATGTGCGTCATCAAAAGGGTGCTTTTGGAGACGCTTTGGAAGCTTTTCCGCCAAAAAGATACGAAGGGAGCGCCATGAAATATGTGTTGTCTGGTTGGAGGAGTGCACTCACTGGAGTTGCAAATTTGTGTGGTTGGGATTTAAGGAATTATAGGAGTGAAGGTGACTTGGTGAAAGAAATTGTTAGGATGGTTCTGAGCAAACTAGACAACACCTTATTGTCTATAACAGAATTTCCGGTTGGATTAGAAGCCCGTACACAACAAGTGATTGAATTCATTGAAAATCAATCAAACAAAGTCTGCATAGTAGGAATCTGGGGAATGGGAGGGTCGGGTAAAACAACCACAGCCAAAGCTATCTACAACCAAATTCATCGTGATTTTGAGGATAGAAGTTTCATTGAAAATATTAGAGAAGTCTGTGAAAAGGATGGTAAAGGTCATATTCATTTACAAGAACAACTTCTTGCAGATGTCCTGATGACAAAGATAAAGATACATAGCATCGGAATGGGCACAACTATAATTGAGAAACGACTTCGTGGAAAAAGGTTACTTGTTGTACTTGATGATGTGTCTGAGTTTGAGCAATTACAAGCTCTATGTGGAAACCGTAGATGGATTGGTGAAGGAAGTGTAATAATTGTTACAACTAGAGATGTACGATTGCTTAATGTACTTCAAGTTGACTGTGTTTATCAAATGGAGGAAATGAACAAAAATGAATCCCTCGAGCTTTTTAGTTGGCATGCTTTCATGGAAGCAAATCCAAGAGAAGAGTTTGTGGAACTCTCAAGAAATGTTGTTGCTTACTGTGGAGGACTACCACTCGCTCTTGAAGTTCTTGGTGCTTATTTATACCAAAGGACAAAGAAAGAGTGGAACAGTGTATTGTCAAAACTAGAAATAATTCCCAATGATCGAGTTCAAGAGAAATTAAGAATAAGCTTTGATGGTTTACGCGATCAAATGGAAAAGGATATATTTCTTGACATATGTTGCTTCTTTATTGGTAAAGACAGAGCCTATGTCACAGAGATATTAAATGGATGTGGACTGCGTGCTGATATTGGAATAACAGTTCTTATAGAGCGTAGCCTCATAAAAGTTGAAAAGAACAACAAACTGGGAGTGCATGATTTGCTACGAGACACGGGAAGAGAGATTATTCGTGAAACTTCAGCAAGAGAACCTGGGAAGCGCAGCCGGTTGTGGTTTCATGAGGATGTACTTGATGTATTGACAAAGAACAATGGGACAGAAGCTGTTGAGGGATTGGCTCTGAAGTTGCATTTAACCAGCCGAGATTGCTTTAAAGTTAATGCTTTTGAGGAAATGAGGAGATTGAGACTGTTGCAACTTGATCATGTACAACTCACTGGAGATTATGGATATCTTTCTAAGAAACTAAGGTGGATTTATTGGCAAGGATTTCCTTTAAAACACCTACCTAACAACTTTTGTCTGGAAAATGTAATTGCAATCGATGTAAAACACAGTAATCTTAAACTACTCTGGAAAGAACCCCAGGTTCTGGGCTGGCTAAAAATACTCAATCTTAGTCATTCCAAGTACTTGACAGAAACCCCTGACTTTTCAAAAATGCCAAATCTTGAAAAACTCATTCTCAAAGATTGTCCAAGTTTGTGCAAGGTACACCAGTCCATTGGAGATCTCCACAATCTTCATCTAATAAATTTGAAGGACTGTACGAAATTAAGCAATCTCCCAAGAGTGACTTATAAGTTGAAATCTGTGAAAACTCTCATCCTTTCTGGTTGTTTAAAGATTGACAAATTAGAAGAAGATATAGTGCAGATGGAATCCTTGACAACTCTAATTGCAGAAAATATTGCTGTGAAACATGTGCCATTTTCCATAGTAAGATCAAAAAGCATTGGATACATATCCCTATGTGGATTTGAAGGATTATCACGCAATGTTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAATCCGCTATCTCATATTCAACCGTTTAGTGGCATATCATCATCTCTAGTTTCCATGGATGTGCAGAATAATAATATGGGTGATATAGCACCAATTCTTGGTAGCCTTTCAAATCTGCGAAGTGTTTTGATGCTATGTGAAACAGAATTTCAACTATCTAAACAATTAAGAACAATTTTGGATGATGTATATGGTGTAAATTTTACTGAATTAGAAATAACATCATATTCATCACAAATTTCAAATCACTCCTTGAGGTCTTACTTGATTGGAATTGGAAGTTACCAAGAAGTCTTCAACGCTCTCAGTAAAAGCATATCTGAGGGATTGGCAACCAACGAGTCTTGTGATGTTTTTCTCCCAGGTGACAATGATCCTTACTGGTTGACCCATACAGGTGATGGAAATTCAGTGTATTTCAGCGTGCCTAAGGATTGTCACTTGAAGGGAATGACTTTGTGTGTCATTTATTCATCAACTCCTGAAAACACAGCATCTGAATATCTTATTAGTGTCATAATGGTTAATTACACAAAGTGCACCATCCAGATATATAAGCGAGACACAGTAATTTCCTTTAATGATGAAGATTGGCAGGGCTTAATATCACATCTAGGATCTGGTGACAAAGTGGAGATTTTTGTGACTTTTGGGAAAGGATTGGAAGTAAAGAGAACAACTGTCTATCTAATGTATGATGAATCAATTGACAAACTAGCAGAGCCTTCTGCTAAGCCAAAGAAAGATGACATGGAAATGGAGACTTCTCCTAAGCCAAAGAAAACTAACATGGAAATGGAGACTTCTCCTAAGCCAAAGAAAGAGCCAAAGAAAAATGACATGGAAATGGAGACTTCTCCTAAGCCAAAGAAAAAAACCATAGCAAGATTCCTAAAGAAAATTGTGATGTGTAAGATTCAGCTGCAGTAG 3249 0.3807 MSASSSNPIWIYDVFLNFRGEDTRRTIVSHLYNALLNAGVNTFMDDHKLPKGTELQPELLQVIEGSHISIVVLSKGYVRSAWCLNELEQIMQCRATYGQVVLPIFYDVDPSDVRHQKGAFGDALEAFPPKRYEGSAMKYVLSGWRSALTGVANLCGWDLRNYRSEGDLVKEIVRMVLSKLDNTLLSITEFPVGLEARTQQVIEFIENQSNKVCIVGIWGMGGSGKTTTAKAIYNQIHRDFEDRSFIENIREVCEKDGKGHIHLQEQLLADVLMTKIKIHSIGMGTTIIEKRLRGKRLLVVLDDVSEFEQLQALCGNRRWIGEGSVIIVTTRDVRLLNVLQVDCVYQMEEMNKNESLELFSWHAFMEANPREEFVELSRNVVAYCGGLPLALEVLGAYLYQRTKKEWNSVLSKLEIIPNDRVQEKLRISFDGLRDQMEKDIFLDICCFFIGKDRAYVTEILNGCGLRADIGITVLIERSLIKVEKNNKLGVHDLLRDTGREIIRETSAREPGKRSRLWFHEDVLDVLTKNNGTEAVEGLALKLHLTSRDCFKVNAFEEMRRLRLLQLDHVQLTGDYGYLSKKLRWIYWQGFPLKHLPNNFCLENVIAIDVKHSNLKLLWKEPQVLGWLKILNLSHSKYLTETPDFSKMPNLEKLILKDCPSLCKVHQSIGDLHNLHLINLKDCTKLSNLPRVTYKLKSVKTLILSGCLKIDKLEEDIVQMESLTTLIAENIAVKHVPFSIVRSKSIGYISLCGFEGLSRNVFPSIIWSWMSPTMNPLSHIQPFSGISSSLVSMDVQNNNMGDIAPILGSLSNLRSVLMLCETEFQLSKQLRTILDDVYGVNFTELEITSYSSQISNHSLRSYLIGIGSYQEVFNALSKSISEGLATNESCDVFLPGDNDPYWLTHTGDGNSVYFSVPKDCHLKGMTLCVIYSSTPENTASEYLISVIMVNYTKCTIQIYKRDTVISFNDEDWQGLISHLGSGDKVEIFVTFGKGLEVKRTTVYLMYDESIDKLAEPSAKPKKDDMEMETSPKPKKTNMEMETSPKPKKEPKKNDMEMETSPKPKKKTIARFLKKIVMCKIQLQ* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0309 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
Apr10g0309 1082 Gene3D Ribonuclease Inhibitor 548 880 IPR032675 -
Apr10g0309 1082 SMART till_3 11 154 IPR000157 GO:0007165
Apr10g0309 1082 Pfam TIR domain 12 188 IPR000157 GO:0007165
Apr10g0309 1082 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 1005 IPR044974 GO:0006952
Apr10g0309 1082 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 157 IPR035897 -
Apr10g0309 1082 Gene3D - 185 343 IPR027417 -
Apr10g0309 1082 PRINTS Disease resistance protein signature 214 229 - -
Apr10g0309 1082 PRINTS Disease resistance protein signature 291 305 - -
Apr10g0309 1082 PRINTS Disease resistance protein signature 384 398 - -
Apr10g0309 1082 PRINTS Disease resistance protein signature 645 661 - -
Apr10g0309 1082 Gene3D - 349 433 IPR042197 -
Apr10g0309 1082 Pfam NB-ARC domain 197 415 IPR002182 GO:0043531
Apr10g0309 1082 Gene3D - 7 184 IPR035897 -
Apr10g0309 1082 ProSiteProfiles TIR domain profile. 10 180 IPR000157 GO:0007165
Apr10g0309 1082 MobiDBLite consensus disorder prediction 1014 1064 - -
Apr10g0309 1082 SUPERFAMILY L domain-like 508 816 - -
Apr10g0309 1082 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0309 Apr-Chr10 7284330 7289106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0309 12 762 WRKY Transcription Factor Family AT4G12020 30.025 6.52e-83 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0309 - - gmx:100798685 1526.15