Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0306 ATGAACGACGGCGACGGCCGCCAAGACGACACTTCACGATCACTGAATTTCGACAACCTGAAAGTTATCTCCGCCCTGGGACGCGGCGCAAAGGGCGTCGTGTTCCTCGCGAGAACCGGTGACCGGTCTTCGAACGAGTGCTTGGCTCTAAAAGTGATATCCAAAGCCCTGATTCTTCAGAAGAAGTTAAAGAACCACAAAAACGACGATGACGAGTACACGAGGGTGTCGTTCGAGGAGGAAGTGCTAAGTCGTTTCGATCACCCCCTTTTGCCGCGGCTACGAGGGGTTTTGGAAACTAACGGTGTTGTTGGGTTCGCCATTGATTACTGCCCCGGTGGCACCCTCCATTCTCTCAGGAAGAAACAGACTGAGAAAATGTTCTCCGATGATACCATCAGGTTCTACGCTGTGGAATTGACCCTCGCATTGGAGTATTTGCACAGTTTAGGAATAGTGTACAGGGATTTGAAACCAGAGAATGTGATGATTCAAGAAAATGGTCACGTAATGCTCGTTGATTTCGATCTCTCCAAGAAGCTAAACCCTAAATCCCTTCAATGGCTGAATCGCAACTCGTCGCCGAGTCCTAACTCGCAGAAACACACGGGGAAGCGACGGTTATCTCGGTTCTACAGTTTCTGTAACTCGGGCATTTCGCCTTGTGACTCTGACTCCGAGCCTCAACTCGGTATTGACTCAGCGCGTCGTACTGAGTCTGACTCAGTGGAAAAATCGAACTCGTTCGTTGGAACGGAAGAGTACGTGGCACCTGAAATTGTCTCAGGGAAGGGTCACGGTTTCGGCGTTGATTGGTGGTCACTCGGCGTCGTTTTGTACGAGATGCTATACGGAACGACGCCGTTTAAGGGTGAGAATCGGAAGGAAACGTTTTACCGGATTTTGACGAAGGAGCCGGAGTTAACCGGGGAGAAGACGGCGCTAAGGGATTTGATTGGGAGATTGCTGGAAAAAGATCCTGACCGTCGGATTGAGGTGGAGGAAATCAAGGGTCACGATTTCTTCAAAGGGGTTAAGTGGGACACGGTGTTGCAAATTGCAAGGCCACCTTATATTCCTCAAAATGAGGTTGAGAACAAAGTGGGGTTTAGCAAAAACGACGTGGAATTGTTCGTGGACGAGCTCTTTTTTCCTAAGAGCGATGATGGCGCAGAGAAAATTGAAAAGGTCGAAGAAAAGAACGGTAATGGGGAGAATAATAAAACGGTGTGGGTTGACGATTTTAATTACGCTCCCACTCAGAATCAAGATTTTTTAATTTTTTGA 1287 0.4841 MNDGDGRQDDTSRSLNFDNLKVISALGRGAKGVVFLARTGDRSSNECLALKVISKALILQKKLKNHKNDDDEYTRVSFEEEVLSRFDHPLLPRLRGVLETNGVVGFAIDYCPGGTLHSLRKKQTEKMFSDDTIRFYAVELTLALEYLHSLGIVYRDLKPENVMIQENGHVMLVDFDLSKKLNPKSLQWLNRNSSPSPNSQKHTGKRRLSRFYSFCNSGISPCDSDSEPQLGIDSARRTESDSVEKSNSFVGTEEYVAPEIVSGKGHGFGVDWWSLGVVLYEMLYGTTPFKGENRKETFYRILTKEPELTGEKTALRDLIGRLLEKDPDRRIEVEEIKGHDFFKGVKWDTVLQIARPPYIPQNEVENKVGFSKNDVELFVDELFFPKSDDGAEKIEKVEEKNGNGENNKTVWVDDFNYAPTQNQDFLIF* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0306 428 Pfam Protein kinase domain 243 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0306 428 Pfam Protein kinase domain 22 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0306 428 Gene3D Transferase(Phosphotransferase) domain 1 115 185 - -
Apr10g0306 428 Gene3D Transferase(Phosphotransferase) domain 1 242 361 - -
Apr10g0306 428 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Apr10g0306 428 ProSiteProfiles Protein kinase domain profile. 20 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0306 428 ProSiteProfiles AGC-kinase C-terminal domain profile. 343 428 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr10g0306 428 SMART serkin_6 20 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0306 428 MobiDBLite consensus disorder prediction 223 246 - -
Apr10g0306 428 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 3 401 - -
Apr10g0306 428 PANTHER FLIPPASE KINASE 1-RELATED 3 401 - -
Apr10g0306 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Apr10g0306 428 SUPERFAMILY Protein kinase-like (PK-like) 17 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0306 Apr-Chr10 7237086 7239669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0306 1 428 AGC Kinase Gene Family AT3G25250 58.486 4.63e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr10g0306 Pkinase 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0306 K20714 - gmx:100785773 653.284