Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0303 ATGCGACACAAATTGGATGCAGGACATGAAAAACAAGTAAACAAGGCACTTTATTCCTTTTCATCTTCAAATCGAATTGATTTTCCCATTCAAATGACTGAAGAAATTAAAAAAACACGAGAAAGTTTTGATGCTGTAGTAGAAGACATGTATAAATTGAATTTATGCCCACGATCTATTGTGGTCAAGCAAACTGACAGTGGATGGAGAGAAACATGTTCTTTTGTGTTAGAGACAGATATCATTGGAAGAGATGACACCAAAAAGGAGATTATTAGTCTGTTGAGACATCCTCATGAAAACCAAAAAGTTTCCGTGGTTGCCATTGTTGGCCTTGGTGGTTTGGGGAAGACAGCTCTTGCACAATTGTCAGTTACTCGTTGCCAAATAGCAGACGGATCATCATTAGACTATTTGCAAGAAGAGCTTCGTGAAAATTTAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGGCATGACAAATGGGATGAGTTGAGAAAGTACTTGATGTGTGGCGCTCAAGATAGCAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAATGCAATGACTGTTAGCACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGCATCTTGGAGGTTATTGAAGAACATTGCATTTGAGGATGATTCCAAAATGAATCAAAACCTAGAATCAATAGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCATTGGCAGTTAGAGCGCTGGGAGGCCTGTTACGAGGACAAAATGAACAAAGTGAATGGGAGAAGGGTTACCTTATATGTTCAACTAAAGAGCAGCACGTGGAAGAGATTGGTAACCAATTTGTAAAGATTTTTTTGATGAACTCAATTTTTCAAGATGCAAAGAATGATGAATATGGTGTGATCATTAGTTTCAAAATGCACGATTTAATGCATGATCTTTCAATACTTGTTGCTGGCAATGATTGCTGTTACTTGGACAGTACAGCGGAAAAAGTTGAAAGCAGTCCAGTACACGTATCACTGGAATCTTGTGAGGCCATTCATTTGTTGAAATCATTAGATCCGAGCAGGCTGCGAACTTTGATTTTGCCAAATGTCTTTCAAGAGGAAGAATATTTGTCGGTTATTACGAACTTCAAATACTTACGTGTCTTGAAGATGCAGCAATTTTGCGCTTTTGATCTCTCGGATTCCATTGAAAATCTGAAGCATTTAAGATACCTTGCTTTAGGACAAGAAACAAGTGTTTCCAAATCTATGAGCAATCTTATTTTCCTGCAAACATTAAAATTAAAGAATTACGATGAAAAATCATTTTTTGAAGTGGTCACAAAATTAGTCAATCTGAGATGGCTTGACTATGGCTCCTTGAGTGAGATGGCATTTGGATGGGGAAAATTTGTTAGATTTTAA 1431 0.3711 MRHKLDAGHEKQVNKALYSFSSSNRIDFPIQMTEEIKKTRESFDAVVEDMYKLNLCPRSIVVKQTDSGWRETCSFVLETDIIGRDDTKKEIISLLRHPHENQKVSVVAIVGLGGLGKTALAQLSVTRCQIADGSSLDYLQEELRENLSGKKYLLVLDDIWNERHDKWDELRKYLMCGAQDSKILVTTRSENVANAMTVSTSYPLKGLTDEASWRLLKNIAFEDDSKMNQNLESIGKEIAKKCKGVPLAVRALGGLLRGQNEQSEWEKGYLICSTKEQHVEEIGNQFVKIFLMNSIFQDAKNDEYGVIISFKMHDLMHDLSILVAGNDCCYLDSTAEKVESSPVHVSLESCEAIHLLKSLDPSRLRTLILPNVFQEEEYLSVITNFKYLRVLKMQQFCAFDLSDSIENLKHLRYLALGQETSVSKSMSNLIFLQTLKLKNYDEKSFFEVVTKLVNLRWLDYGSLSEMAFGWGKFVRF* 477
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0303 476 PANTHER DISEASE RESISTANCE PROTEIN RP 270 460 IPR044974 GO:0006952
Apr10g0303 476 PANTHER DISEASE RESISTANCE PROTEIN RP 26 267 IPR044974 GO:0006952
Apr10g0303 476 PANTHER OS05G0414200 PROTEIN 270 460 - -
Apr10g0303 476 PANTHER OS05G0414200 PROTEIN 26 267 - -
Apr10g0303 476 Gene3D - 130 201 IPR027417 -
Apr10g0303 476 Pfam NB-ARC domain 132 277 IPR002182 GO:0043531
Apr10g0303 476 Gene3D Ribonuclease Inhibitor 346 474 IPR032675 -
Apr10g0303 476 Gene3D - 206 288 IPR042197 -
Apr10g0303 476 PRINTS Disease resistance protein signature 106 121 - -
Apr10g0303 476 PRINTS Disease resistance protein signature 242 256 - -
Apr10g0303 476 PRINTS Disease resistance protein signature 450 466 - -
Apr10g0303 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 267 IPR027417 -
Apr10g0303 476 SUPERFAMILY L domain-like 311 462 - -
Apr10g0303 476 Gene3D - 75 129 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr10g0303 Apr-Chr10 7151166 7152861 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0303 104 270 WRKY Transcription Factor Family AT5G45050 25.616 3.00e-06 48.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0303 - - aprc:113850706 936.791