Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0289 ATGGCTAAGTTTGAGTCAGTTTCATTTGCTGTTGCTTCAAATCTCATACACAGGTTGGCTTCCGCAGATTTTCGTGAATTTGGACAAGAGTATCGTGTGACGGAAATTTTAGAAGAGCTTAAGAACTCTGTTGAATCCATCAATGATAAGCTCCTTGATGCCGATGTTAAACAAGATCAAGATGGTGGTGTGCGAGTTTGGATCAGAAAGTTCAAAAAAGTACTTCATGCTGCAGATGACTTCTTAGATGGCCTTGCTCTCGAATTTATGCGACACAAATTGGATACAGGATATGGAACAGAAGTAAACAAGGCACCTTATTCCTATTCATTCTCAAATCGAACTGATTCTCCCATTCAAATGAGAATAGAAATTGAAGAAATACTAGCAAGTTTTAATGATGTAGTACAAGAAATGCATAAATTGAATTTAAGCTCAGGGGTGGTTAGGCAGACTAATAGTGAATGGAGGGAAACATGTTCCACGTTAGAACAATATATCATTGGAAGAGATGAGAGTAAGAAGGAGATTATTAGTCTGTTGGAACAACCGAAGCAAACGGTTTCTGTGATTGCTATTGTTGGCATTGGTGGTTTAGGGAAGACAGCGCTGGCTCAGTTGGTGTATAAGGACTTGGAGGGTTCTTTTGACAAGCAAATATGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGATGAAAATATTAGATTCAATAAATACTGATAGCCAAACACAAGACCAATCATCAGAGAAGTTGCAAAAACAGCTTCATAAGAATTTAAGCGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGTTATAACAAATGGGCTGGATTGAGAAAGTATTTGCTGTGTGGCGCTCAAGATAGCAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAAGGTAATGGCTGCTAGCACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGAATCTTGGACGTTGTTGAAGAACATTGCATTTGAGGATGAGTCCCAAGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCAAAAAAATGTAAAGGGGTTCCACTAGCAGTTAAAACGATGGGAGGCCTGTTACGAAGACAAAATGAAGAGAGTGAATGGGAAGAAGTTTTACACGGTGACTTCTGGGAATTATGTGAACAAGAAGATATCATGCCAATTCTAAAACTCAGCTACAGAAAATTGTTGCCAGAAATGAAACAATGTTTTGCTTATTGCTCTTTATATCCCAAAGATTCAGAGATTTTAAAGGATGAGTTGATTCAGTTATGGATGGCCCAAGGTTACCTTGAATGTTCAACTAAAAAGCAGCAGATGGAAGTTGTCGGCAACCAATTTATAAAGATTTTTTTGGCGAACTCATTTTTTCAAGATGCAAAAAGTAATGAATATGGTGAGATCATTAGTTTCAAAATGCACGATTTAATGCATGATCTTGCAATGCTAGTAGCTGGCAATGAATGTTGTTACTTGGGTAATGAGGCAGAAGAAGTTAAGGGTAGTCCCATGCACGTGATACTGGAATCCGGTGCCATTCGTTTATTGAGAAAATTAGATCCGAGCAGGCTGCGAACTTTGATGTTGTGGGGTTACAATGAGCAAGAATTTTCTCTGTTATTGCAGACTTCAAATGCCTACGTGTCTTGA 1692 0.3812 MAKFESVSFAVASNLIHRLASADFREFGQEYRVTEILEELKNSVESINDKLLDADVKQDQDGGVRVWIRKFKKVLHAADDFLDGLALEFMRHKLDTGYGTEVNKAPYSYSFSNRTDSPIQMRIEIEEILASFNDVVQEMHKLNLSSGVVRQTNSEWRETCSTLEQYIIGRDESKKEIISLLEQPKQTVSVIAIVGIGGLGKTALAQLVYKDLEGSFDKQIWVCVSDNFDVKTILMKILDSINTDSQTQDQSSEKLQKQLHKNLSGKKYLLVLDDIWNESYNKWAGLRKYLLCGAQDSKILVTTRSENVAKVMAASTSYPLKGLTDEESWTLLKNIAFEDESQGVNQNLESMGKEIAKKCKGVPLAVKTMGGLLRRQNEESEWEEVLHGDFWELCEQEDIMPILKLSYRKLLPEMKQCFAYCSLYPKDSEILKDELIQLWMAQGYLECSTKKQQMEVVGNQFIKIFLANSFFQDAKSNEYGEIISFKMHDLMHDLAMLVAGNECCYLGNEAEEVKGSPMHVILESGAIRLLRKLDPSRLRTLMLWGYNEQEFSLLLQTSNAYVS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0289 563 Gene3D - 150 317 IPR027417 -
Apr10g0289 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 421 IPR027417 -
Apr10g0289 563 Pfam NB-ARC domain 172 407 IPR002182 GO:0043531
Apr10g0289 563 Gene3D - 407 496 IPR036388 -
Apr10g0289 563 Gene3D - 322 406 IPR042197 -
Apr10g0289 563 Coils Coil 37 57 - -
Apr10g0289 563 Pfam Rx N-terminal domain 13 100 IPR041118 -
Apr10g0289 563 PANTHER OS05G0414200 PROTEIN 33 545 - -
Apr10g0289 563 PANTHER DISEASE RESISTANCE PROTEIN RP 33 545 IPR044974 GO:0006952
Apr10g0289 563 Gene3D - 11 116 - -
Apr10g0289 563 PRINTS Disease resistance protein signature 190 205 - -
Apr10g0289 563 PRINTS Disease resistance protein signature 262 276 - -
Apr10g0289 563 PRINTS Disease resistance protein signature 359 373 - -
Apr10g0289 563 PRINTS Disease resistance protein signature 525 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0289 Apr-Chr10 6918170 6932097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0289 176 383 WRKY Transcription Factor Family AT5G45050 24.074 5.34e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0289 - - aprc:113850137 1119.76