Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0277 ATGGAGAGATTCACTCCATTATCCTGTTCTGGTCTGTTGAGACAACCACATGAAAACCAAAAAGTTTCTGTGATTGCTATTGTTGGCATTGGTGGTTTAGGGAAGACAACTCTTGCTCAGTTGGTGTATAATGACTTGGAAGTGCAGAACTCTTTTGAAATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGGAAATACTAGGATCAATTACGGGTGACCAAGTTGAAGACAAGTTATCATTAGGCAACTTGCAAAGAAAACTTCACCAAAAAATAAGTGGCAAGAAATATTTGTTGGTCCTAGATGACATTTGGAATGAGAGACATGACAAGTGGGCTGAATTGAGAAAGTACCTAATGTGTGGCGCTCAAGGTAGCAAGATTTTAATGACAACTCGAAGTAAAAATGTAGCAAATGCAATGACCGCTAGCACTTCCTATCCCTTGAAAGGTTTGACTGATGAGGAATCTTGGAGTTTGTTGAAGAACATTGCATTTGAAGGTGATTCTAAAGGAGTAAATCAAAATCTAGAATCAATGGGAAAAGAAATAGCTAAGAATTGTAAAGGGGTTCCACTGGCAGTTAAAACGCTGGGAGGCCTGTTACGAGAACAAACTCAAGAAAAAGAATGGGAGAATGTTTTACGTGGTGGCTTCTGGAAATTATGTGAAAAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTACTGCTCTTTATATCCCAAGGATTCAAGAATTCCAAAGAATGAGTTGATTCAGTTATGGGTGGCACAGGGTTACCTTGAATGTTCAGCTGAAAAACACCACATGGAGATGGAAGACATTGAGGCTGAAAGTGATGAACACGGCGAGATCATTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAAGGCTTGTTGCTGGCAATGATTTCTGTTACTTGGATAGTAAGGCGGAAAAGGTTGAAGGTAGTCCCATGCACGTAGCTTTGGAGACGGGGGCCATTCATTTATTGGATTCATTGAATGCAAGCAGACTGCGAACTTTGATGTTGCCATGTAATTGCAATTTTGAAGAGGAGGAAGTGTCTTTTGTTGCAAATTTGAAATACTTGCACGTCTTAGAGATATCAGATTTTTCTTTTTGCAAATTGTCTAATTCAATTGCAAAATTGAAGCATTTAAGATATCTTCGTATTTTTGGTTATCGCTCCTGGGATGGGATGTCAGTTGGGTTGGGAAAATTGTGGTCGCTGCAATTCTTACCAGACTTTGTTGTGGGAGATAGCAAAGAAACAAAATATGGCACACTAAATGAATTGAAAGACTTAAACCACATAAGGGGCGAATTAAGAATTAATCATCTCAACCGTGTGAGAGACGTGGCTCTGGAATCACAGCATGTAAATTTAAAAGAGAAAAAGTTCCTTCGATCCTTGACTCTGGATTGGTCGGATGAAGACACCTTCAACGGTGACAGCTCACAGTTATTAGAAAACCTTCAGCCCCACCATAATCTTGAGCGATTGCAGGTGAACTTTTATCCAGGCGTGCGTTTCCCAAATTGGCTTTCTCTCCTCACAAATGTTGTTCACATCACTCTCTTTTATGTTCGTAAATGCCGCTGTCTCCCACCGTTGGAACGTCTCCCGTCGCTGAAGTCACTTGAGATAAGCTATTTTGATGAATTGGAATACATATATCTTCCTGAAGATGGTTTTGGAGTAAACTTTTTCCCCTCTTTGGAGAGCCTCAAATTAGTGTGGTGCTCTAATCTCAGGGGATGGCGGAGGCTGAGAGATGATATCAATGATTCTCGTAATCTCTCTTTACCTCTTTCATTTCCTCATCTTTCTCAACTAGGCGTCTATGACTGTCCACAGTTGACTTGCATGCCTACTTTTCCAAATCTTAAGGATTTAAAATGGTGTCAATGTAGTGCGGAGCCATTAACAGAAACACTAAACACAACGCCAACATTTTCAGTTGACTCATCTTCCTCAGCTGCTCCTCTTTCCATGCTCAAAGAATTGACGATTTCTGATCCTATGAATTTACCACAGGGTTGGATGCAAAATCGGACTTCACTCGAGTTTCTTACAATTCAATGGTGTGACAGTGAAACACTTGAAGAATTTGAACCTGGGTTTAAGTACAACACCAACTGCCTTCCGGCCCTGCGAAAAATCAACATATGTTGGTGTAAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCTCTTCAGGAGATCACAATCTCATACTGCCGAGATTTGGCATCTCTGCCCGAAGGAATGAGTCGTCTTACCAACTTAAAGACTTTTGAGGTTGATAATAGTTTCCTCTTACTTAAAGAATGCCAAAGAGAGACAAGTGCTGTTAGTCGCCAAATTGCACACATCCCAGAAGTTATCCTTCATGAATGA 2481 0.4027 MERFTPLSCSGLLRQPHENQKVSVIAIVGIGGLGKTTLAQLVYNDLEVQNSFEMQMWVCVSDNFDVKTILKEILGSITGDQVEDKLSLGNLQRKLHQKISGKKYLLVLDDIWNERHDKWAELRKYLMCGAQGSKILMTTRSKNVANAMTASTSYPLKGLTDEESWSLLKNIAFEGDSKGVNQNLESMGKEIAKNCKGVPLAVKTLGGLLREQTQEKEWENVLRGGFWKLCEKQDSIMPILKLSYHNLSPEMRQCFAYCSLYPKDSRIPKNELIQLWVAQGYLECSAEKHHMEMEDIEAESDEHGEIISFKMHDLMHDLARLVAGNDFCYLDSKAEKVEGSPMHVALETGAIHLLDSLNASRLRTLMLPCNCNFEEEEVSFVANLKYLHVLEISDFSFCKLSNSIAKLKHLRYLRIFGYRSWDGMSVGLGKLWSLQFLPDFVVGDSKETKYGTLNELKDLNHIRGELRINHLNRVRDVALESQHVNLKEKKFLRSLTLDWSDEDTFNGDSSQLLENLQPHHNLERLQVNFYPGVRFPNWLSLLTNVVHITLFYVRKCRCLPPLERLPSLKSLEISYFDELEYIYLPEDGFGVNFFPSLESLKLVWCSNLRGWRRLRDDINDSRNLSLPLSFPHLSQLGVYDCPQLTCMPTFPNLKDLKWCQCSAEPLTETLNTTPTFSVDSSSSAAPLSMLKELTISDPMNLPQGWMQNRTSLEFLTIQWCDSETLEEFEPGFKYNTNCLPALRKINICWCKRLKALPDWICNLSSLQEITISYCRDLASLPEGMSRLTNLKTFEVDNSFLLLKECQRETSAVSRQIAHIPEVILHE* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0277 826 Gene3D - 244 321 IPR036388 -
Apr10g0277 826 PRINTS Disease resistance protein signature 24 39 - -
Apr10g0277 826 PRINTS Disease resistance protein signature 98 112 - -
Apr10g0277 826 PRINTS Disease resistance protein signature 195 209 - -
Apr10g0277 826 PRINTS Disease resistance protein signature 761 777 - -
Apr10g0277 826 SUPERFAMILY RNI-like 683 797 - -
Apr10g0277 826 Gene3D Ribonuclease Inhibitor 454 664 IPR032675 -
Apr10g0277 826 Gene3D - 158 243 IPR042197 -
Apr10g0277 826 Gene3D - 9 154 IPR027417 -
Apr10g0277 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 258 IPR027417 -
Apr10g0277 826 Pfam NB-ARC domain 18 246 IPR002182 GO:0043531
Apr10g0277 826 Gene3D Ribonuclease Inhibitor 667 810 IPR032675 -
Apr10g0277 826 PANTHER DISEASE RESISTANCE PROTEIN RP 20 720 IPR044974 GO:0006952
Apr10g0277 826 SUPERFAMILY L domain-like 299 720 - -
Apr10g0277 826 Gene3D Ribonuclease Inhibitor 348 453 IPR032675 -
Apr10g0277 826 PANTHER OS05G0414200 PROTEIN 20 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0277 Apr-Chr10 6644693 6647309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0277 22 322 WRKY Transcription Factor Family AT5G45050 23.377 8.89e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0277 - - aprc:113850682 1664.82