Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0276 ATGGCTAAGTTTGAGTCAGTTCCATTTGCTGTTGCTTCAAACCTCATTCACAGGTTAGCTTCCCCAGATTTTCTTGAATTTGGACAGGAGTATGGTGTGATGAAAGAGTTGGAAGCGCTTAAGAAGACAATTGGATCTATCAATGATGTGCTCCTTGATGCTGACAACAAGCAAGAACAAGTTCGTGTGCGTAATTGGATATCTGACTTCAAAGAAGCACTTCATGCTGCAGATGACTTCTTAGATGACCTTGCTTTCCAATTTAAGAGAGACAAATTAGATGCAGTACATCAAAAAGGTCTAAACAAGTTAATTAAATATTGGTCATCTTCAAAACGAATTGATTCTCCCATTCAAATGACTCAAGATATTAAAAAAACACGAGAAAGTTTTGATGATCTAGTAAAAGAAACGAAGGATTTGAATTTAAGGCCAAGTTCTATGGTGGTTAAGCAGACTGACAGTGAATGGAGGGAAACTGATAGTTCTGTGTTAGAATCAGATATCATTGGGAGAGATGATTGTAAAAAGGAGATTATTAGTCTGTTGAGACAAGCATGTGAAAAGGAAAAAGTTTCTGTGATTGCTATTGTTGGCATTGGTGGTTTAGGGAAGACAGCTCTTGCACAATTGGTGTATAATGACTTGGAAGTGCAGAAATTTTTTGATATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTTTGAAGAAAATATTAGAATCAATTATTGGTGACCAAGTTGAAGACAAGTTATCATTAGGCAACTTGCAAAAAAAACTTCACCAAAAAATAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACATGAGAAATGGGCTGAATTGAGAAAGTACTTAATGTGTGGTGCGCACCATAGTAAGATTTTATTGACAACTCGAAGTGAAAATGTAGCAGAGGCAATGACTGCTAGCCTTTCCTATCCTTTGAAAGGTTTGACTGATGAAGAATCTTGGGATTTGTTGAGGAACATTGCATTTAAGGATGATTCCAGAGGAGTGAATCAAAATCTAGAATCAGTGGGGAAAGAAATAGCAAAAAGATGTAATGGGGTTCCCCTGGCGGTTAAATCGCTAGGAGGCCTGTTACGAGGACAAAATGAAGAAAGTGAATGGGAAGATGTTTTACGTGGTGACTTCTGGGAATTATGTGAAGAGCAAGATAGTATTATGCCCATTCTAAAACTCAGTTACCACATCTTGTCGCCAGAAATGAGACAATGTTTTGCTTACTGCTCTTTGTATCCCAAGGATTCAGAAATTCTAAAGGATGAGTTGATTGAGTTATGGATGGCACAGGATTACCTTAAATGTTCAACTGTAAAACAGCGCATGGAAGATGTAGGTAATCAATTTGTAAAGATGTTTTTGATGAACTCATTTTTTCAAGACGCAAAAAGAAGTGATGAATATGGTGAGATCATTAGCTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTATTGTTACTTGGATAGTAAGGCAAAAAAAGTTGAAGGTAGTCCCATGCACGTGTCATTGAAATCAGGTGCCGTTCATTTGTTGAAATCATTAGATCCAAGCAGGCTGCGAACTCTGATTTTGCCGTATGACATTGTAGAGGAAGAATATTTGTGTGTTATTGCAGAGTTCAAATACTTACGCGCCTTGAGGGTGGCAGTTTCTTCCTTCTGCAAATTGTTTGATTCAACTGGAATATTTAAGCATTTAAGATATCTTGATATTGCTGATGATGAATCCTTGAGTGGGATGGCAGCTGGGTTGGGAAAATTGTGCTCGCTGCAGTCCTTACCAACCTTTGTTGTGGGAGATAGCGAAGCAAAATATGGAACACTAAATGAATTGAGAGACTTGAACCTAAGAGGCAAATTAGAAATCAAGCATCTCGATCGCGTGAGAGACGTGGCTCTGGAATCAGAGGAAGTAAATTTAAAAGGAAAAAAATTCCTTCAATCCTTGACTCTAAATTGGTCGCGTACAGACTTCCATAACAGTGGCAGCTCAGAATTATTAGAAAACCTTGAGCCCCCCCATAATCTTAAGCGATTGGAGGTGAGGTGGTATCCAGGTGTGCTTTTCCCAGAATGGTTTTCTCTCCTCAAAGATGTTGTTGGCATCACTCTCTATGAGCTTGGTAATTGTAGCTGTCTCCCACCTTTGGAACATCTCCCTTACCTGAAGTCACTTGCGATAGAGTGTCTTCGTGAATTGGACTACATATATGAAGATGGTTATGAAGATGGTTTTGCAGTAACTTTCTTCCCCTCCTTGGAGAGCCTCACATTATTTGATTGTCCCAAGCTCAGGGGATGGCAGAGGCGGGGAGATGATATTGATTCACCTAATCTCTCCTTACCTCTTTCATTTCCTCATCTTTCTCGACTAAGAGCCTCTTGTTGTCCCCAGTTGACTCGCATGCCTACTTTTCCAAACGTTAAGAATTTGGATTGGTATGAATGCAGTGCGGAGCCATTAATAGAAACACTAAACACAACAGCGTCAACATGGTCAGCTGACTCATCTTCCTCTGCTGCTGCTCTTTCCATGCTCAAACAATTGACGATTTCTAGTCCTATGAATTTACCAGAGGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTCCAAATTGGATGTGAAAGTGAAACACTTGAGGAATTGGACAACAACAACTGCCTTCCCTGTTCTCTGCGAAAAATCAACTTGTATTGGTGTAGAAGGCTAAATTCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTGCAGCATATCACAATCTCACACTGCCCAGAATTGGCATCGTTACCCGAAGGAATGAGTGGTCTTACCAACTTAAAGATCTTTGAGGTCGTGGATTGTTCCCTCTTACTTGAAGAATGCCGAACAGAGACAAGTGCTGTTAGTCGCCAAATCGCACACATCCCACAAATTATCCTTACGGAACGTACGGATTGA 3024 0.3978 MAKFESVPFAVASNLIHRLASPDFLEFGQEYGVMKELEALKKTIGSINDVLLDADNKQEQVRVRNWISDFKEALHAADDFLDDLAFQFKRDKLDAVHQKGLNKLIKYWSSSKRIDSPIQMTQDIKKTRESFDDLVKETKDLNLRPSSMVVKQTDSEWRETDSSVLESDIIGRDDCKKEIISLLRQACEKEKVSVIAIVGIGGLGKTALAQLVYNDLEVQKFFDMQMWVCVSDNFDVKTILKKILESIIGDQVEDKLSLGNLQKKLHQKISGKKYLLVLDDIWNERHEKWAELRKYLMCGAHHSKILLTTRSENVAEAMTASLSYPLKGLTDEESWDLLRNIAFKDDSRGVNQNLESVGKEIAKRCNGVPLAVKSLGGLLRGQNEESEWEDVLRGDFWELCEEQDSIMPILKLSYHILSPEMRQCFAYCSLYPKDSEILKDELIELWMAQDYLKCSTVKQRMEDVGNQFVKMFLMNSFFQDAKRSDEYGEIISFKMHDLMHDLAMLVAGNDYCYLDSKAKKVEGSPMHVSLKSGAVHLLKSLDPSRLRTLILPYDIVEEEYLCVIAEFKYLRALRVAVSSFCKLFDSTGIFKHLRYLDIADDESLSGMAAGLGKLCSLQSLPTFVVGDSEAKYGTLNELRDLNLRGKLEIKHLDRVRDVALESEEVNLKGKKFLQSLTLNWSRTDFHNSGSSELLENLEPPHNLKRLEVRWYPGVLFPEWFSLLKDVVGITLYELGNCSCLPPLEHLPYLKSLAIECLRELDYIYEDGYEDGFAVTFFPSLESLTLFDCPKLRGWQRRGDDIDSPNLSLPLSFPHLSRLRASCCPQLTRMPTFPNVKNLDWYECSAEPLIETLNTTASTWSADSSSSAAALSMLKQLTISSPMNLPEGWMQNLTSLESLQIGCESETLEELDNNNCLPCSLRKINLYWCRRLNSLPDWICNLSSLQHITISHCPELASLPEGMSGLTNLKIFEVVDCSLLLEECRTETSAVSRQIAHIPQIILTERTD* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0276 1007 Pfam NB-ARC domain 175 414 IPR002182 GO:0043531
Apr10g0276 1007 PANTHER OS05G0414200 PROTEIN 35 901 - -
Apr10g0276 1007 Gene3D - 328 413 IPR042197 -
Apr10g0276 1007 Gene3D Ribonuclease Inhibitor 845 986 IPR032675 -
Apr10g0276 1007 PRINTS Disease resistance protein signature 194 209 - -
Apr10g0276 1007 PRINTS Disease resistance protein signature 268 282 - -
Apr10g0276 1007 PRINTS Disease resistance protein signature 365 379 - -
Apr10g0276 1007 PRINTS Disease resistance protein signature 939 955 - -
Apr10g0276 1007 Gene3D - 156 323 IPR027417 -
Apr10g0276 1007 Gene3D - 414 504 IPR036388 -
Apr10g0276 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 428 IPR027417 -
Apr10g0276 1007 Pfam Rx N-terminal domain 15 99 IPR041118 -
Apr10g0276 1007 PANTHER DISEASE RESISTANCE PROTEIN RP 35 901 IPR044974 GO:0006952
Apr10g0276 1007 Gene3D - 12 124 - -
Apr10g0276 1007 Gene3D Ribonuclease Inhibitor 561 841 IPR032675 -
Apr10g0276 1007 SUPERFAMILY L domain-like 485 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0276 Apr-Chr10 6624729 6631351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0276 192 389 WRKY Transcription Factor Family AT5G45050 26.214 2.06e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0276 - - aprc:113850647 1300.42