Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0275 ATGGCTGAGCTTGAGTCAGTGCCATTTGCTGTTGCATCAAATCTTATTCACAGGTTAGCTTCCCCAGATTTTCTTGAATTTGGACAAGAGTATGGTGTGATGGAAGAGTTAGAAGAGCTTAAGAACACTATTGAATCCATCAATGATAAGCTTCTTGACGCCGACAATAAACAAGATCAAAACGGTGGTGTGCGAGTTTGGATCAGAAAGTTCAAAAAAGTACTTCATCATGCAGATGACTTCTTAGATGACCTTGCTATCGAATTTAAGAGAGACAAATTGAATGCAGCAGAAGGAAAAGAAGTAAACAAGGTACTTCGTTCCATTTCATCTTCAAATCAAATTCCTTTAGACAGTGAAATGCCTGACAAAATTAAAGATATACTAGAAAGTTTTAATGATGTACTAAAAGAAATGAAGGATTTGAATTTAAGCCCAAGATTAGGGGTAGTTAAGCAGACTAACCTTGAATGGAGGGAAACATGTTCTTTTGTGTTAGAATCAGATATCATTGGAAGAGATGACAGTAAAAAAGAGATTATTAGTCTGTTGAGACAATCACATGAAAAGGAGATAGTTTCTGTGATTGCTATTGTTGGCATTGGTGGTTTAGGGAAGACAGCTCTTGCACAATTGGTGTATAATGACTTGGAAGTGAAGAAGGTTTTTGAAACGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAATCACTGGTGACCAAGTTGAAGACAAGTTATCGTTAGGCAACTTGCAAAGAAAACTTCACCAAAAAATAAGCGGTAAAAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACATGACAGATGGGCTGAACTGAGAAAGTACTTAATGTGTGGCGCTCAAAATAGCAAAATTTTAGTGACAACTCGAAGTGATAATGTAGCAAAGGCAATGACTGCTAGTACTTCCTATCCTTTGAAAGGTTTGACTGACGAAGAATCTTGGAGTTTGTTGAAGAACATTGCATTTGAGGATGATTCCAAAGAAGTGAATCAAACTCTAGAATCAATGGGGAAAGAAATAGCAAGAAAATGCAAAGGGGTTCCACTGGCGGTCAAAACACTGGGAGGCCTGTTACGAGGACAAACTGAAGAAAGTGAATGGAAGAATGTCTTACGTGATGACTTCTGGAAATTATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCACAACTTGTCTCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTATCCCAAGGATTCAAGAATTACAAAGAATGAGTTGATTCAGCTATGGATGGCACAGGGTTACCTTGAATATTCAGCTGAAAAACACCGCATGGACATGGAAGACATTGGTAACCAATTAGTAAAGATTTTTTTTATGAACTCATTTTTTCAAGAGGCTGAGTGTGATAAATATGGTGAGATCATTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTGCTGTTACTTGGATAGCAAGGCGGAAAAGGTTGAAGGTAGTCCCATGCACGTATCTTTGGAATCTGGGGCCATTCATTTATTGAATTCATTAGATAAAAGCAGGCTGCGAACGTTGATTTTGCCGGATCATTGCAATTTTGATGAGGAAGTGCCGGTTGCCAATTTCAAATACTTGCACGTCTTGAAGATTTCAAGTTATTATTTTCGCAAATCGTCTGATTCAATTGAAGGATTGAAGCATTTAAAATATCTTGCTGTTTATTTCCCCTTAAATGGGATACCTGGGTTGGGAAAATTATACTCGTTGCAATTCTTACCAGCCTTTATTGTGAGAAGTAGCCAAGAAACAGGCAATGCCCCACTAAATGAATTGAAAGACTTAAACCAGCTGAGGGGAGAATTAAGAATTGAGAGTCTCGAATTGGTGGGAAACGTGGCTCTGGAATCACAGGATGTAAATTTAAAAGAAAAAAAATTCCTTAAATCCTTGACTCTAGATTGGCATAATGAATATTACGATGAATGGCCAAGAAGAGACCTCGGTATTGTTGAATAA 2094 0.373 MAELESVPFAVASNLIHRLASPDFLEFGQEYGVMEELEELKNTIESINDKLLDADNKQDQNGGVRVWIRKFKKVLHHADDFLDDLAIEFKRDKLNAAEGKEVNKVLRSISSSNQIPLDSEMPDKIKDILESFNDVLKEMKDLNLSPRLGVVKQTNLEWRETCSFVLESDIIGRDDSKKEIISLLRQSHEKEIVSVIAIVGIGGLGKTALAQLVYNDLEVKKVFETQMWVCVSDNFDVKTILKKILESITGDQVEDKLSLGNLQRKLHQKISGKKYLLVLDDIWNERHDRWAELRKYLMCGAQNSKILVTTRSDNVAKAMTASTSYPLKGLTDEESWSLLKNIAFEDDSKEVNQTLESMGKEIARKCKGVPLAVKTLGGLLRGQTEESEWKNVLRDDFWKLCEEQDSIMPILKLSYHNLSPEMRQCFAYCSLYPKDSRITKNELIQLWMAQGYLEYSAEKHRMDMEDIGNQLVKIFFMNSFFQEAECDKYGEIISFKMHDLMHDLAMLVAGNDCCYLDSKAEKVEGSPMHVSLESGAIHLLNSLDKSRLRTLILPDHCNFDEEVPVANFKYLHVLKISSYYFRKSSDSIEGLKHLKYLAVYFPLNGIPGLGKLYSLQFLPAFIVRSSQETGNAPLNELKDLNQLRGELRIESLELVGNVALESQDVNLKEKKFLKSLTLDWHNEYYDEWPRRDLGIVE* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0275 697 Coils Coil 34 57 - -
Apr10g0275 697 Pfam NB-ARC domain 174 417 IPR002182 GO:0043531
Apr10g0275 697 Gene3D Ribonuclease Inhibitor 523 694 IPR032675 -
Apr10g0275 697 PANTHER DISEASE RESISTANCE PROTEIN RP 36 681 IPR044974 GO:0006952
Apr10g0275 697 SUPERFAMILY L domain-like 482 680 - -
Apr10g0275 697 Gene3D - 159 325 IPR027417 -
Apr10g0275 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 429 IPR027417 -
Apr10g0275 697 PANTHER OS05G0414200 PROTEIN 36 681 - -
Apr10g0275 697 PRINTS Disease resistance protein signature 195 210 - -
Apr10g0275 697 PRINTS Disease resistance protein signature 269 283 - -
Apr10g0275 697 PRINTS Disease resistance protein signature 366 380 - -
Apr10g0275 697 Gene3D - 329 414 IPR042197 -
Apr10g0275 697 Gene3D - 12 116 - -
Apr10g0275 697 Gene3D - 415 506 IPR036388 -
Apr10g0275 697 Pfam Rx N-terminal domain 15 97 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0275 Apr-Chr10 6616802 6619173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0275 193 472 WRKY Transcription Factor Family AT5G45050 22.295 8.45e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0275 - - aprc:113849070 1379