Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0274 ATGGCTAAGTTTGAGTCAATTCCATTTGCTGTTGCTTCAAACTTCATTCACAGGTTAGCTTCCCCAGATTTTCTTGAATTTGGACAAGAGTATGGTGTGATGGAAGAGTTAGAAGAGCTTAAGAACACTGTTGAATCCATCAATGATAAGCTTCTTGATGCCGACGATAAACAAGATCAAAACGGTGGTGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTTCATCATGCAGATGACTTTTTAGATGACCTCGCTATTGAATTCAGGAGAGACAAATTGGGTACAGCAGAAGGAAAAGAAGTAAACAAGGTACTTCTTTCCATTTCATCTTCAAATCAAATTCCTTTATACAATGAAATGCCTGACAAGATTAAAGAAATACGAGAAAGTTTTAATGATGTAGTAAAAGAATTGAAGGATTTGAATTTAACCCCAAGATCAGGGGTAGTTAAGCAGACTAACCGTGAATGGAGGGAAACATGTTCTTTTGTGTTAGAATCAGATATCATTGGAAGAGATGAGAGTAAAAAAGAGATTATTAGTCTGTTGAGACAACCACATGAAAAGCAAAGAGTTTCTGTGATTGCTATTGTTGGCCTCGGTGGCTTGGGGAAGACAACTCTTGCTCAGTTGGTGTATAATGACTTGGAAGAGCAGAACTCTTTTGAAATGCAAGTGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAATCACTGGTGACCAATTTGAAGACAAGTTATCGTTAGGCAACTTGCAAAGAAAACTTCACCAAAAAATAAGCGGTAAAAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACATGACAGATGGGCTGAACTGAGAAAGTACTTAATGTGTGGCGCTCAAAATAGCAAAATTTTAGTGACAACTCGAAGTGATAATGTAGCAAAGGCAATGACTGCTAGTACTTCCTATCCTTTGAAAGGTTTGACTGACGAAGAATCTTGGAGTTTGTTGAAGAACATTGCATTTGAGGATGATTCCAAAGAAGTGAATCAACCTCTAGAATCAATGGGGAAAGAAATAGCAAGAAAATGCAAAGGGGTTCCACTGGCGGTCAAAACACTGGGAGGCCTGTTACGAGGACAAACTGAAGAAAGAGAATGGGAGAATGTTTTACGTGGTGACTTCTGGAAATTATGTGAAGAGCAAGATAATATCATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTACTGCTCTTTAAATCCCAAGGATTCAGAAATTTCAAAGAATAATTTAATTCAGTTATGGATGGCACAGGGTTACCTTGAATGTTCAGCTGAAAAACACCGCATGGACATGGAAGATATTGGTAACCAATTTGTAAAGACGTTTTTGATGAACTCATTTTTTCAAGAAGCAGAAATTGATGATTACGGCGAGATCATTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTGCTGTTACTTGGATAGTAAGGCGGAAAAGGTTGAAGGTAGTCCCATGCACGTGTATTTGGAAACTGGGGCCATTCATTTATTGGATTCGTTGAATGCAAGCAGAGTGAGAACTTTGAATTTGCCGGATAACAGCAGTCTTCAAGAGGAGGAAATGTCTGCTGTTGTTACAAAATTCAAATACTTACGCGTCTTGAGGATATCACCTCTTTGCAAATGGGACGCTTCAATTGGAGAATCGAAGCATTTAAGATATCTTACGTTTAATGGTTCGATCTTCACACCGTTTCCGATACCAGTTGGGTTGGGAAAATTGTGCTTTTTGCAATTCTTATCAGCCTTGGCCGTGCGAGATAGGGAAGAAACAAACTGTGGCAGCACACTAAATGAATTGAAGGACTTAAACCACTTAAGGGGAGAATTAACAATTAATTCTCTCAGTAAGGTGAGAGACGTGGCTCTGGAATCACAGGATGTAAATTTAAAAGAAAAGAAGTTCCTTCAATCCTTGACTCTGGCATGGTTGTATGGAGGCGTTGACAGTGACAGCTTACAATTACTAGAAAACCTTCAGCCTCACCATAATCTTAAGCGATTGGTGGTGAAGTGGTATCCAGGAGTGCTTTTCCCAAGTTGGCTTTCTCTCCTCACAAATGTTGTTGACATTGCTCTCGTTGGGTTTGTTAATTGTCGCTGTCTCCCACAGTTGGAACGTCTCTCATTTCTGAAGTCACTTAACATAGATTCTCTTAGTGAATTGGAATACATATGTCTTTATGAAGATGGTCTTGCAGTAACCTTCTTCCCTTCTTTGGAGAGCCTCAGGTTAGTTGATTGTCCCAAGCTCAGGGGATGGGGGAGGCTGGGAGATGATATCAATGATTCACATAATCTCTCTCTACCTCTTTCATTTCCTGATCTTTCTCGTCTAGTCATCTCTTGCTGTCCACAGTTGACTTGCATGCCTACTTTTCCAACAGTCAAGGTTTTAGACTTGAAAAACTGCAGTGCAGAGCCATTAATAGAAACATTAAAAGCAACAGTGTCAACATGTTCGGCTGACTCATCTACTTCCGTTGCTCCTCTTTCCATGCTCAAAGAATTGACGATTGCTGATCATATGAATTTACCAAAGGGTTGGATGCAAACTCTGACTTCTCTCGAGTCTCTTGGAATTCAAAACAGTGAATCACTTGAGGAATTTGAGACAGTGTTTAAGGACGACAACAACTGCCTTCCTCCTTTGCAAAAAATCAGCATAGTTTTGTGTGAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCCCATCGCTTCAACATATCGAAGTCTCAGGTTGCCCAGAATTGGAATTTCTACCCGAAGGAATGAGTCGTCTTACCAACTTAAAAATCTTTGAGGTCAAGGATTGTTTCCTCTTACTTAAAGAATGCCAAACAGAGACAAGTGCTGTTAGTCGCCAAATTGCACACATCCCACAAATTATCCTTCGTGAATGGTGA 3039 0.3955 MAKFESIPFAVASNFIHRLASPDFLEFGQEYGVMEELEELKNTVESINDKLLDADDKQDQNGGVRVWIRRFKKVLHHADDFLDDLAIEFRRDKLGTAEGKEVNKVLLSISSSNQIPLYNEMPDKIKEIRESFNDVVKELKDLNLTPRSGVVKQTNREWRETCSFVLESDIIGRDESKKEIISLLRQPHEKQRVSVIAIVGLGGLGKTTLAQLVYNDLEEQNSFEMQVWVCVSDNFDVKTILKKILESITGDQFEDKLSLGNLQRKLHQKISGKKYLLVLDDIWNERHDRWAELRKYLMCGAQNSKILVTTRSDNVAKAMTASTSYPLKGLTDEESWSLLKNIAFEDDSKEVNQPLESMGKEIARKCKGVPLAVKTLGGLLRGQTEEREWENVLRGDFWKLCEEQDNIMPILKLSYHNLSPEMRQCFAYCSLNPKDSEISKNNLIQLWMAQGYLECSAEKHRMDMEDIGNQFVKTFLMNSFFQEAEIDDYGEIISFKMHDLMHDLAMLVAGNDCCYLDSKAEKVEGSPMHVYLETGAIHLLDSLNASRVRTLNLPDNSSLQEEEMSAVVTKFKYLRVLRISPLCKWDASIGESKHLRYLTFNGSIFTPFPIPVGLGKLCFLQFLSALAVRDREETNCGSTLNELKDLNHLRGELTINSLSKVRDVALESQDVNLKEKKFLQSLTLAWLYGGVDSDSLQLLENLQPHHNLKRLVVKWYPGVLFPSWLSLLTNVVDIALVGFVNCRCLPQLERLSFLKSLNIDSLSELEYICLYEDGLAVTFFPSLESLRLVDCPKLRGWGRLGDDINDSHNLSLPLSFPDLSRLVISCCPQLTCMPTFPTVKVLDLKNCSAEPLIETLKATVSTCSADSSTSVAPLSMLKELTIADHMNLPKGWMQTLTSLESLGIQNSESLEEFETVFKDDNNCLPPLQKISIVLCERLKALPDWICNLPSLQHIEVSGCPELEFLPEGMSRLTNLKIFEVKDCFLLLKECQTETSAVSRQIAHIPQIILREW* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0274 1012 Coils Coil 34 57 - -
Apr10g0274 1012 PRINTS Disease resistance protein signature 195 210 - -
Apr10g0274 1012 PRINTS Disease resistance protein signature 269 283 - -
Apr10g0274 1012 PRINTS Disease resistance protein signature 366 380 - -
Apr10g0274 1012 PRINTS Disease resistance protein signature 946 962 - -
Apr10g0274 1012 SUPERFAMILY RNI-like 810 986 - -
Apr10g0274 1012 Gene3D Ribonuclease Inhibitor 530 800 IPR032675 -
Apr10g0274 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 429 IPR027417 -
Apr10g0274 1012 PANTHER OS05G0414200 PROTEIN 37 911 - -
Apr10g0274 1012 Gene3D - 13 140 - -
Apr10g0274 1012 PANTHER DISEASE RESISTANCE PROTEIN RP 37 911 IPR044974 GO:0006952
Apr10g0274 1012 Pfam Rx N-terminal domain 26 100 IPR041118 -
Apr10g0274 1012 SUPERFAMILY L domain-like 481 853 - -
Apr10g0274 1012 Gene3D Ribonuclease Inhibitor 835 1002 IPR032675 -
Apr10g0274 1012 Pfam NB-ARC domain 175 417 IPR002182 GO:0043531
Apr10g0274 1012 Gene3D - 415 506 IPR036388 -
Apr10g0274 1012 Gene3D - 154 325 IPR027417 -
Apr10g0274 1012 Gene3D - 329 414 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0274 Apr-Chr10 6602220 6606842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0274 193 426 WRKY Transcription Factor Family AT5G45050 26.337 3.14e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0274 - - aprc:113850680 1446.03