Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0273 ATGGCTGAGCTTGAGTCAGTGCCATTTGCTGTTGCATCAAATCTTATTCACAGGTTAGCTTCCCCAGATTTTCTTGAATTTGGACAAGAGTATGGTGTGATGGAAGAGTTAGAAGAGCTTAAGAACACTATTGAATCCATCAATGATAAGCTTCTTGACGCCGACAATAAACAAGATCAAAACGGTGGTGTGCGAGTTTGGATCAGAAAGTTCAAAAAAGTACTTCATCATGCAGATGACTTTTTAGATGACCTTGCTATCGAATTCAGAAGAGACAAATTGGGTGCAGCAAAAGGAAAAGAAGTAAACAAGGTACTTCTTTCCATTTCATCATCAAATCAAATTCCTTTATACAATGAAGTGCCTGACAAAATTAAAGAAATACGAGAAAGTTTTAATGATGTAGTAAAAGAAATGAAGGATTTGAATTTAAGCCCAAGATCAGGGGTAGTCAAGCAGACTAACCTTGAATGGAGGGAAACATGTTCTTTTGTGTTAGAATCAGATATCATTGGAAGAGATGACAATAAAAAAGAGATTATTAGTCTGTTGAGACAATCACATGAAAAGGAAAGAGTTTCTGTGATTGCTATTGTTGGCATTGGTGGTTTAGGGAAGACAGCTCTTGCACAATTGGTGTATAATGACTTGGAAGTGAAGAATTTTTTTGAAATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAATCACTGGTGACCAAGTTGAAGACAAGTTATCGTTAGGCAACTTGCAAAGAAAACTCCACCAAAAAATAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGTTATGACAAATGGGCTGAATTGAGAAAGTACTTGATGTGTGGCGCTCAAGATAGCAAGATTTTAGTAACAACTCGAAGTGATAATGTATCAAAGGCAATGACTGCTGGTACTTCCTATCCTTTGAAAGGTTTGACTGACGAAGAATCTTGGAGTTTGTTGAAGAACATTGCATTTGAGGATGATTCCAAAGAAGTGAATCAAACTCTAGAATCAATGGGGAAAGAAATAGCCAGAAAATGTAAAGGGGTTCCACTGGCGGTCAAAACGCTGGGAGGCTTGTTACGAGGACAAACTGAAGAAAGTGAATGGAAGAATGTTTTACGTGATGACTTCTGGAAATTATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCACAACTTGTCTCCAGAAATGAGACAATGTTTTGCTTACTGCTCTTTATATCCCAAGGATTCAAGAATTCCAAAGAATGAGTTGATTCCGTTATGGATTGCACAGGGTTATCTTGAATGTTCAGCTGAAAAACACCGCATGGACATGGAAGATGTTGGTAACCAATTTGTAAAGATTTTTTTGATGAACTCATTTTTTCAAGATGCTGAGAGTGATCAATATTGTGAGATCATTAGTTTCAAGATGCATGATTTAGTGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTGCTGTTACATGGATAGTAAGGAGGAAAAGGTTGAAGGTAGTCCCATGCACGTGTGTTTGGAAGCTGGGGCCATTCATATATTGGATTCATTGAATGCAAGCAGACTGCGAACTTTGATTTTGCCGGAGACGTGCAGTCTTGAAGAGGAGGAAGTGTCTGCTGTTGTTACAAAATTCAAATACTTACGCGCCTTGAGGATATCATATCTTTGCAAATGGTCTGATTCAATTGGAGAATTGAAGCATTTAAGATATCTTGATATTAATGGTTTGCAATACCCATGGATTAAGATACCAGTTGGGTTGGGAAAACTATGCTCTTTGCAATTCTTACCAGTCCTGTTCGTGGGAGATAGCGAAGAAACAAACTGTTGCAGCACACTAAATGAATTGAAGGATTTAAACCACTTAAGGGGAGAATTAACAATTGATTATCTGAGTAATGTGAGAGACGTGGCTCTGGAATCACAGGATGTAAACTTAAAAGAAAAGAAGTTCCTTCAATCCTTGACTCTGACATGGTTGGATGAAGACGTTAACAGTGACAGCATACAATTACTAGAAAACCTTCAGCCCCACCATAATCTTAAGCGATTGGAGGTGAATTGGTATCCAGGCGTGCTTTTCCCAAGTTGGCTTTCTCTCCTCATAAATGTTGTTGACATCACTCTCGTTGGGTTAGTTAATTGTCGCTGTCTCCCACCGTTGGAACGTCTCCCGTTCCTGAAGTCACTTAAGATAGATTTTCTTCGTGAATTGGAATACATAGATCTTGATGAAGATGGTTTTGCAGTAACCTGCTTCCCATCTTTGAAGAGCCTTGTATTAACAAGTTGTGATAAGCTCAGGGGATGGCGGAGGTGGAGAGATGATATCAATGATTCACATAATCTCTCTCTACCTCTTTCATTTCCTCATCTTTCTCGTCTAGTCGTTTCTTTCTGTCCACAGTTGACTTGCATGCCTACTTTTCCCTCATCTTCTTCCGTTGCTCCTCTTTCCATGCTCAAAGAATTGACGATTTCTGATCATATAAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTTCAAATTCAAAACAGTGAATTACTTGAAGAATTTGAGACAGAGTTTAAGGACGACAACAATTGCCTTCCTTCTCTGCGAAAAATCAACATAAGAGAGTGTGAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATTGCTTCACCATATCACAATCTCAAGCTGCCCAGAATTGGCATTTCTACCCGAAGGAATGAGTCGTCTTACCAACTTAAAGATCTTTGAGGTCAAGAATTGTGCCCTCTTACTTAAAGAATTCCGAACAGAGACAAGTGATGTTATTCGCCAAATTGCACACATCCCACAAATTATCCTGAGTAATTGGAATATTGATGTGGAGCTTTCTGAGGATCCCAAGGAACTTATTGAACTGAGGGTCTCTCTGGCTACTCATCAATTGTTGTGGAAATGGAACTTTCAGTTTTGTCACCACTGGTGCATCTTCCCTTGTCTCCTTTTTCGCATCTGGCTCCGTCTAGCACGGTTGTGCCTTCGTTGTCTGCAAGGGCGTGCTGTTCTAAGCACGGCCGTTCTGTTTCAGGCAGCATTGGCGTGCAGGGTTATGCAAGGGCGTGCTCCTCCTTCAGCACAGGCGTGCATGACTTATGTGTTTGCGTCCCATTCAAATTTTTCCCACTTCTTAGAGTAA 3273 0.3966 MAELESVPFAVASNLIHRLASPDFLEFGQEYGVMEELEELKNTIESINDKLLDADNKQDQNGGVRVWIRKFKKVLHHADDFLDDLAIEFRRDKLGAAKGKEVNKVLLSISSSNQIPLYNEVPDKIKEIRESFNDVVKEMKDLNLSPRSGVVKQTNLEWRETCSFVLESDIIGRDDNKKEIISLLRQSHEKERVSVIAIVGIGGLGKTALAQLVYNDLEVKNFFEMQMWVCVSDNFDVKTILKKILESITGDQVEDKLSLGNLQRKLHQKISGKKYLLVLDDIWNESYDKWAELRKYLMCGAQDSKILVTTRSDNVSKAMTAGTSYPLKGLTDEESWSLLKNIAFEDDSKEVNQTLESMGKEIARKCKGVPLAVKTLGGLLRGQTEESEWKNVLRDDFWKLCEEQDSIMPILKLSYHNLSPEMRQCFAYCSLYPKDSRIPKNELIPLWIAQGYLECSAEKHRMDMEDVGNQFVKIFLMNSFFQDAESDQYCEIISFKMHDLVHDLAMLVAGNDCCYMDSKEEKVEGSPMHVCLEAGAIHILDSLNASRLRTLILPETCSLEEEEVSAVVTKFKYLRALRISYLCKWSDSIGELKHLRYLDINGLQYPWIKIPVGLGKLCSLQFLPVLFVGDSEETNCCSTLNELKDLNHLRGELTIDYLSNVRDVALESQDVNLKEKKFLQSLTLTWLDEDVNSDSIQLLENLQPHHNLKRLEVNWYPGVLFPSWLSLLINVVDITLVGLVNCRCLPPLERLPFLKSLKIDFLRELEYIDLDEDGFAVTCFPSLKSLVLTSCDKLRGWRRWRDDINDSHNLSLPLSFPHLSRLVVSFCPQLTCMPTFPSSSSVAPLSMLKELTISDHINLPKGWMQNLTSLESLQIQNSELLEEFETEFKDDNNCLPSLRKINIRECERLKALPDWICNLSLLHHITISSCPELAFLPEGMSRLTNLKIFEVKNCALLLKEFRTETSDVIRQIAHIPQIILSNWNIDVELSEDPKELIELRVSLATHQLLWKWNFQFCHHWCIFPCLLFRIWLRLARLCLRCLQGRAVLSTAVLFQAALACRVMQGRAPPSAQACMTYVFASHSNFSHFLE* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0273 1090 Coils Coil 34 57 - -
Apr10g0273 1090 SUPERFAMILY RNI-like 778 956 - -
Apr10g0273 1090 Pfam NB-ARC domain 174 417 IPR002182 GO:0043531
Apr10g0273 1090 Gene3D - 12 117 - -
Apr10g0273 1090 PANTHER DISEASE RESISTANCE PROTEIN RP 36 882 IPR044974 GO:0006952
Apr10g0273 1090 Gene3D Ribonuclease Inhibitor 532 802 IPR032675 -
Apr10g0273 1090 Gene3D Ribonuclease Inhibitor 803 973 IPR032675 -
Apr10g0273 1090 PRINTS Disease resistance protein signature 195 210 - -
Apr10g0273 1090 PRINTS Disease resistance protein signature 269 283 - -
Apr10g0273 1090 PRINTS Disease resistance protein signature 366 380 - -
Apr10g0273 1090 PRINTS Disease resistance protein signature 865 881 - -
Apr10g0273 1090 SUPERFAMILY L domain-like 482 854 - -
Apr10g0273 1090 Gene3D - 415 506 IPR036388 -
Apr10g0273 1090 PANTHER OS05G0414200 PROTEIN 36 882 - -
Apr10g0273 1090 Gene3D - 329 414 IPR042197 -
Apr10g0273 1090 Gene3D - 159 323 IPR027417 -
Apr10g0273 1090 Pfam Rx N-terminal domain 15 100 IPR041118 -
Apr10g0273 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 429 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0273 Apr-Chr10 6572991 6584129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0273 193 426 WRKY Transcription Factor Family AT5G45050 25.103 3.31e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0273 - - aprc:113850680 1431.77