Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0272 ATGGCCAAGTTTGAGTCAGTTCCATTTGCTGTTGCTTCAAACCTCATTCACAGGTTAGCTTCCCCAGATTTTCTTGAATTTGGACAAGAGTATGGTGTGAAGGAAGAGTTAGAAGAGCTTAAGAACACTGTTGAATCCATCAATGATAAGCTTCTTGATGCCGACGATAAACAAGATCAAAACGGTGGTGTGCGAGTTTGGATCAGAAAGTTCAAAAAAGTACTTCATCATGCAGATGACTTTTTAGATGACCTCGCTATGGAATTCAGGAGAGACAAATTGGGTGCAGCAGAAGGAAAAGAAGTAAACAAGATACTTCTTTCCATTTCATCTTCAAATCAAATTCCTCTATACAATGAAATGCCTGACAAGATTAAAGAAATACGAGAAAGTTTTAATGATGTAGTAAAAGAATTGAAGGATTTGAATTTAAGCCCAAGATCAGGGGTAGTTAAGCAGACTAACCGTGAATGGAGGGAAACATGTTCTTTTGTGTTAGAATCAGATATCATTGGAAGAGATGAGAGTAAAAAAGAGATTATTAGTCTGTTGAGACAACCACATGAAAAGCAAAGAGTTTCTGTGATTGCTATTGTTGGCCTCGGTGGCTTGGGGAAGACAACGCTTGCTCAGTTGGTGTATAATGACTTGGAAGTGCAGAATGTTTTTGAAAAGAAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAGTTACTCGTCGCCCGACAGCAGATGGGTCGTCATTAGACTACTTGCAAGAAGAACTTCGTGAAAAAATAAGTGGTAAGAAATATTTATTGGTCCTGGACGACACTTGGAATGAGAGATCTGACAAATGGGCTGAACTGAAAAAGTACTTGATGTGTGGCGCTCAAGATAGCAAGATTTTAGTGACAACTCGAAGTAAAAAGGTAGCAAATGCAATGACCGCTACCACTTCCTATCTTTTGAAAGGTTTGACTGACGAGGAATCTTGGAGTTTGTTGAAGAACATTGCATTTGAGGGTGATTCTGAAGGAGTAAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCTAAAAATTGTAAAGGGCTCCCATTGGCAGTTAAAACGCTGGGAGGCCTGTTACGAGAACAAACTGAAGAAAGAGAATGGGAGAACGTTTTACGCGGTGGCGTCTGGAAATCATGTGAAGAGCAAGATAGTATGATGCCAATTCTAAAAGTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTACTGCTCTTTATATCCCAAGGATTCAAGAATTCCAAAGAATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTGAATGTTTAGCTGAAAAACACCGCATGGACATGGAAGATATTGGTAGCCAATTTGTAAAGACGTTTTTGATGAACTCATTTTTTCAAGACGCTGAAAGTGATGAATACGGCGAGATCATTAAATTCAGAATGCATGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTGCTGTTACTTGGATAGTAAGGCGGAAAAGGTTGAAGGTAGTCCCATGCACGTATCTTTGGAATCTGGGGCCATTCATTTATTGAATTCATTAGATAAAAGCCGGCTGCGAACTTTGATTTTGCCGTATTATCGCAATTTTGATGAGGAGGAAGTGCCTGTTGCCAATTTCAAATACTTGCACGTCTTGAAGATTTCAACTCATTATTTTAGCAAATCGTCTGATTCAATTGAAGGATTGAAGCATTTAAGATATCTTGAAATTGTTGGTTATTTCCCCTTAAATGGGATACCTGGGTTGGGAAGATTATACTCCTTGCAATTCTTATCAGCCTTTGTTGCTGTGAGTCGTGGCACACTAAATGAATTGAAAGACTTAAACCAACTGAGGGGAGAATTAAGAATTGAGAGTCTCGATTGGGTGAGTGACGTGGCTCTGGAATCACAGGATGTAAATTTAAAAGAAAAAAAATTCCTTAAATCATTGACTCTAGATTGGTATCATGAACGTGAAGATGAATGGCCAAATAACTACCTCCATATCCGTAACTGTGACAGCTTACAGTTATTAGAAAACCTTCAGCCCCACAGCAATCTTAAGCAATTGGGGGTGAGATCTTACCGAGGCGTGCATTTCCCAAACTGGCTTTCTCTCCTCAAAAATGTTGTTCACATCTCTCTCTCTTCACTTCATAATTGCCGCTGTCTCCCATCGATGGAACGTCTCCCGTTTCTGAAGTCACTTGATATAAGTTTTCTTCATGAATTGGAATACATATCTCTTTACGAAGATTTTGCAGTAACCTTCTTCCCCTCCTTGGAGAGCCTTGTATTATTAAGTTGTTCTAAGCTAAGGGGATGGCGGAGCAGGCTGGGAGATGATATCAATGATTCACATAATCTCTCCTTACCTCTTTCATTTACTAATCTTTCTCAACTAGGTGTCTCTTTCTGTTCAAAGTTGATTTGCATGCCTACTTTTCCAAAAGTCAAGGTTTTAGAATGGGGTCAACTTAGTGCTGCGGAGCCATTAATAGCAACATTAAACACAACATGTTCAGCTGACTCATCTTCCTCCGCTGCTCCTCTTTCCATGCTCAAAGAACTTACGATTTCTGATCCTTCCAAGTTACCAAAGGGTTGGATGCAAACTCTGATTTCTCTCGAGTCTCTTCAAGTTGAATGGCATGAAAGTGAAACGCTAAAGGAATTTGAAACTGGGTTTAAGGGCGGCACCGACTGCCTTCCTTCTCTGCGAAAAATCAGCATACAGTGGTGTGGAATAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAACATATCGAAGTCTCATGCTGCCAAAAATTGGCGTCGCTGCCCGAAGGGATGAGTGGTCTTACCAACTTAAAGATCTTTGAGGTCATCAATTGTTCCCTCTTACTTGAAGAATGCCGAACACAGACAAGTGCTGTTAGTCGCCAAATCGCACACATCCCACAAATTATCCTTCGTGAAAAGTGA 3045 0.3993 MAKFESVPFAVASNLIHRLASPDFLEFGQEYGVKEELEELKNTVESINDKLLDADDKQDQNGGVRVWIRKFKKVLHHADDFLDDLAMEFRRDKLGAAEGKEVNKILLSISSSNQIPLYNEMPDKIKEIRESFNDVVKELKDLNLSPRSGVVKQTNREWRETCSFVLESDIIGRDESKKEIISLLRQPHEKQRVSVIAIVGLGGLGKTTLAQLVYNDLEVQNVFEKKMWVCVSDNFDVKTILKKILESVTRRPTADGSSLDYLQEELREKISGKKYLLVLDDTWNERSDKWAELKKYLMCGAQDSKILVTTRSKKVANAMTATTSYLLKGLTDEESWSLLKNIAFEGDSEGVNQNLESMGKEIAKNCKGLPLAVKTLGGLLREQTEEREWENVLRGGVWKSCEEQDSMMPILKVSYHNLSPEMRQCFAYCSLYPKDSRIPKNELIQLWMAQGYLECLAEKHRMDMEDIGSQFVKTFLMNSFFQDAESDEYGEIIKFRMHDLMHDLAMLVAGNDCCYLDSKAEKVEGSPMHVSLESGAIHLLNSLDKSRLRTLILPYYRNFDEEEVPVANFKYLHVLKISTHYFSKSSDSIEGLKHLRYLEIVGYFPLNGIPGLGRLYSLQFLSAFVAVSRGTLNELKDLNQLRGELRIESLDWVSDVALESQDVNLKEKKFLKSLTLDWYHEREDEWPNNYLHIRNCDSLQLLENLQPHSNLKQLGVRSYRGVHFPNWLSLLKNVVHISLSSLHNCRCLPSMERLPFLKSLDISFLHELEYISLYEDFAVTFFPSLESLVLLSCSKLRGWRSRLGDDINDSHNLSLPLSFTNLSQLGVSFCSKLICMPTFPKVKVLEWGQLSAAEPLIATLNTTCSADSSSSAAPLSMLKELTISDPSKLPKGWMQTLISLESLQVEWHESETLKEFETGFKGGTDCLPSLRKISIQWCGIKALPDWICNLSSLQHIEVSCCQKLASLPEGMSGLTNLKIFEVINCSLLLEECRTQTSAVSRQIAHIPQIILREK* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0272 1014 Coils Coil 34 57 - -
Apr10g0272 1014 Gene3D Ribonuclease Inhibitor 847 1004 IPR032675 -
Apr10g0272 1014 PANTHER OS05G0414200 PROTEIN 34 842 - -
Apr10g0272 1014 SUPERFAMILY L domain-like 481 903 - -
Apr10g0272 1014 Gene3D - 329 414 IPR042197 -
Apr10g0272 1014 Gene3D - 415 506 IPR036388 -
Apr10g0272 1014 Gene3D Ribonuclease Inhibitor 529 846 IPR032675 -
Apr10g0272 1014 Gene3D - 154 326 IPR027417 -
Apr10g0272 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 429 IPR027417 -
Apr10g0272 1014 Gene3D - 12 117 - -
Apr10g0272 1014 SUPERFAMILY RNI-like 870 988 - -
Apr10g0272 1014 Pfam NB-ARC domain 175 416 IPR002182 GO:0043531
Apr10g0272 1014 PRINTS Disease resistance protein signature 195 210 - -
Apr10g0272 1014 PRINTS Disease resistance protein signature 269 283 - -
Apr10g0272 1014 PRINTS Disease resistance protein signature 366 380 - -
Apr10g0272 1014 PRINTS Disease resistance protein signature 948 964 - -
Apr10g0272 1014 PANTHER DISEASE RESISTANCE PROTEIN RP 34 842 IPR044974 GO:0006952
Apr10g0272 1014 Pfam Rx N-terminal domain 15 100 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0272 Apr-Chr10 6544469 6552495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0272 193 771 WRKY Transcription Factor Family AT5G45050 23.065 4.63e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0272 - - aprc:113850680 1704.49