Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0271 ATGATTCATTCTTTTGAGGTGCAGCGGCTATTGAAGAAGATGCTTGATGGTGCTATTGAGATGAAGATGAGGGATGGTGATGTTGCTGGGCTGAATATGGCTTCCTTTGCCCAGCTTGATGCGGTTGGAAATGGAGTGGCCTACTTCACAGTGTTCGTTTCATTGTATAGATCTGTGCTCCTTTCCTCACTGTTTCTACACATTATTGCATTCCTCTCTTTGATTGTCAATATCAACCCTTCTTCATCTTCTCTTTCACTGATGGCCAAGTTTGAGTCAGTTCCGTTTGCTGTTGCTTCAAACCTCATTCACAGGCTAGCTTCCCCAGATTTTCTTGAATTTGGACGAGAGTATGGTGTGATGGAAGGGTTAGAAGAGCTCAAGAACACTGTTGAATCCATCAATGATAAGCTTCTTGATGCCGACGATAATCAAGATCAAAACGGTGGTGTGCGAGTTTGGATCAGAAAGTTCAAAAAAGTACTTCATCATGCAGATGACTTTTTAGATGACCTCGCTATCGAATTCAGGAGAGACAAATTGGGTGCAGCAGAAGGAAAAGAAGTAAACAAGGTACTTCTTTCCATTTCATCTTCAAATCAAATTCCTTTAGACAATGAAATGCCTGACAAGATTAAAGAAATACGAGAAAGTTTTAATGATGTAGTAAAAGAAATGAAGGATTTGAATTTAAGCCCAAGATCAGGGGTAGTCAAGCAGACTAACCGTGAATGGAGGGAAACATGTTCTTTTGTGTTGGAATCAGATATCATTGGAAGAGATGACAGTACAAAAGAGATTATTAGTCTGTTGAGGCAACCACATGAAAAGCAAAGAGTTTCTGTGATTGCTATTGTTGGCATTGGTGGTTTAGGGAAGACAACACTTGCTCAGTTGGTGTATAATGACATGGAAGTGAGGAACTCTTTTGAAATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGGAAATACTAGAGTCAATTCTAGGTGTCCAAGTTGAAGACAAGTCATCGTTAGACAAATTGCAAAGAGAACTTCAGCAAAAAATAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAACGAGAGACATGACAAATGGGCTGAATTGAGAAAGTACTTAATGTGTGGCGCTCAAGATAGCAAGATTTTAGTGACAACTAGAAGTAAAAAGGTAGCAAAAGCAATGACCGCTAGCACTTCCTATCTTTTGAAAGGTTTGACTGACGAGGAATCTTGGAGTTTGTTGAAGAACATTGCATTTGAGGGTGATTCTAAAGGAGTAAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCTAAAAATTGCAAAGGGGTTCCATTGGCAGTTAAAACGCTGGGAGGCCTGTTAAGAGAACAAACTGAAGAAAGAGAATGGGAGAATGTTTTACGCGGTGGCTTCTGGAAATCATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTACTGCTCTTTGTATCCCAAGGATTCAAGAATTCCAAAGGACAAGTTGATTCAGTTATGGACGGCACAGGGTTACCTTGAATTTTCAGCTGAAAAACACAGCATGGACGTGGAAGATATTGGTAACCAATTTGTAAGCACGTTTTTTCTGAACTCATTTTTTCAAGACGCTGAAAGTGATAAACACGGCAGGATCATTAGATTCAGAATGCATGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTGTTGTTACTTGGATAGTATGGCGGAAAAGGTTGAAGGTAGTCCCATGCACGTATCTTTGGAATCTAGGGCCATTCATTTATTGAATTCATTAGATAAAAGCAGGCTGCGAACTTTGATTTTGCCGGATCATCGCAATTTTGATGAGGAGGAAGTGCCTGTTGCCAATTTCAAATACTTGCACGTCTTGAAGATTTCAACTGATTATTTTCACAAATCGTCTGATTCAATTGAAGGATTGAAGCATTTAAGATATCTTGGTTGTGCTGGTTATTTCCCCTTAAATGGGATGCGTGGGTTGGGAAAATTACACTCGTTGCAATTCTTACCAGTCTTTGATGTAAGTAGCCAGGAAACAGGCTATGGCACACTAAATGAATTGAAAGATTTAAACCAGCTGAGGGGAGAATTAAGAATTGAGAATCTCGATTGGGTGGGAAACGTGGCTCTGGAATCACAGGATGTAAATTTAAAAGAAAAAAAATTCCTTAAATCCTTGACTCTAGATTGGTATAATGAGTATTATGATGAATGGCCAAACCACACCCGTGACTGTGACAGTGACAGTGACAACTTACAGTTATTAAAAAACCTTCAGCCCCACAGCAATCTTAAGCAATTGAAGGTGAGTTATTACCGAGGCGTGCATTTCCCATACTGGCTTTCTCTCCTCACAAATGTTGTTCACATCTCTCTCTTTAGCATTGGATGCCGCTGTCTCCCATCGATGGAACGTCTCCCGTCTCTGAAGTCACTTGAGATAAGATTTCTTGCTGAATTGGAATACATATATCTTTCCGAAGATTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAGCCTCGTATTATCATATTGTTCTAAGCTAAGGGGATGGCGGAGGAGGAGGGTGGGATATGATATCAATGATTCACATAATCTCTCCTTAACTCTTTCATTTACTAATCTTTCTCAACTAGATGTCTATTCCTGTTCACAGTTGACTTGCATGCCTACTTTTCCAAAAGTCAAGGTTTTAAAATGGGGTCAATATAGTGCTGCGGAGCCATTAATAGCAACATTAAACACAACATGTTCAGCTGACTCATCTTCATCCGCTGCTCCTCTTTCTATGCTCAAAGAACTTACGATTTCTGATCCTACCAAGTTACCAAAGGGTTGGATGCAAAATCTGATTTCTCTCGAGTCTCTTCAAGTTGAACGGCATGGAAGTGAAACGCTAGAGGAATTTGAAACTGGCTTTAAGGATGGCACCGACTGCCTTCCTTCTCTGCGAAAAATGAACGTGTCTTCGTGTGTAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAATCTCTCATCGCTTCAACATATCGAGGTCTCATTCTGCCAAAAATTGGAGTCGCTGCCCGAAGGGATGAGTGGTCTTACCAACTTAAAGATCTTTGAGGTCATCAACTGTTCCCTCTTACTTGAAGAATGCCGAACACAGACAAGTGCTGTTAGTCGCCAAATCGCACACATCCCACAAATTATCCTTCGTGAAAAGTGA 3324 0.4019 MIHSFEVQRLLKKMLDGAIEMKMRDGDVAGLNMASFAQLDAVGNGVAYFTVFVSLYRSVLLSSLFLHIIAFLSLIVNINPSSSSLSLMAKFESVPFAVASNLIHRLASPDFLEFGREYGVMEGLEELKNTVESINDKLLDADDNQDQNGGVRVWIRKFKKVLHHADDFLDDLAIEFRRDKLGAAEGKEVNKVLLSISSSNQIPLDNEMPDKIKEIRESFNDVVKEMKDLNLSPRSGVVKQTNREWRETCSFVLESDIIGRDDSTKEIISLLRQPHEKQRVSVIAIVGIGGLGKTTLAQLVYNDMEVRNSFEMQMWVCVSDNFDVKTILKEILESILGVQVEDKSSLDKLQRELQQKISGKKYLLVLDDIWNERHDKWAELRKYLMCGAQDSKILVTTRSKKVAKAMTASTSYLLKGLTDEESWSLLKNIAFEGDSKGVNQNLESMGKEIAKNCKGVPLAVKTLGGLLREQTEEREWENVLRGGFWKSCEEQDSIMPILKLSYHNLSPEMRQCFAYCSLYPKDSRIPKDKLIQLWTAQGYLEFSAEKHSMDVEDIGNQFVSTFFLNSFFQDAESDKHGRIIRFRMHDLMHDLAMLVAGNDCCYLDSMAEKVEGSPMHVSLESRAIHLLNSLDKSRLRTLILPDHRNFDEEEVPVANFKYLHVLKISTDYFHKSSDSIEGLKHLRYLGCAGYFPLNGMRGLGKLHSLQFLPVFDVSSQETGYGTLNELKDLNQLRGELRIENLDWVGNVALESQDVNLKEKKFLKSLTLDWYNEYYDEWPNHTRDCDSDSDNLQLLKNLQPHSNLKQLKVSYYRGVHFPYWLSLLTNVVHISLFSIGCRCLPSMERLPSLKSLEIRFLAELEYIYLSEDFAVTFFPSLESLVLSYCSKLRGWRRRRVGYDINDSHNLSLTLSFTNLSQLDVYSCSQLTCMPTFPKVKVLKWGQYSAAEPLIATLNTTCSADSSSSAAPLSMLKELTISDPTKLPKGWMQNLISLESLQVERHGSETLEEFETGFKDGTDCLPSLRKMNVSSCVRLKALPDWICNLSSLQHIEVSFCQKLESLPEGMSGLTNLKIFEVINCSLLLEECRTQTSAVSRQIAHIPQIILREK* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0271 1107 Gene3D - 99 228 - -
Apr10g0271 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 516 IPR027417 -
Apr10g0271 1107 Gene3D Ribonuclease Inhibitor 906 1098 IPR032675 -
Apr10g0271 1107 Pfam NB-ARC domain 262 504 IPR002182 GO:0043531
Apr10g0271 1107 Pfam Rx N-terminal domain 102 187 IPR041118 -
Apr10g0271 1107 PANTHER DISEASE RESISTANCE PROTEIN RP 123 944 IPR044974 GO:0006952
Apr10g0271 1107 Gene3D Ribonuclease Inhibitor 616 894 IPR032675 -
Apr10g0271 1107 SUPERFAMILY L domain-like 569 1085 - -
Apr10g0271 1107 PANTHER OS05G0414200 PROTEIN 123 944 - -
Apr10g0271 1107 Gene3D - 241 413 IPR027417 -
Apr10g0271 1107 Coils Coil 124 144 - -
Apr10g0271 1107 Gene3D - 502 593 IPR036388 -
Apr10g0271 1107 PRINTS Disease resistance protein signature 282 297 - -
Apr10g0271 1107 PRINTS Disease resistance protein signature 356 370 - -
Apr10g0271 1107 PRINTS Disease resistance protein signature 453 467 - -
Apr10g0271 1107 PRINTS Disease resistance protein signature 871 887 - -
Apr10g0271 1107 Gene3D - 416 501 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0271 Apr-Chr10 6501518 6524605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0271 280 540 WRKY Transcription Factor Family AT5G45050 24.528 4.00e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0271 - - aprc:113850680 2172.13