Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0264 ATGTTTTCTTCATCTTCGAATCCTCGATGGGTTGAATTCTTTCATCAACCACTGAATTCTTCTTCATCTACGAATCCTCGATGGGTTGAATTCTTTCATCAATCAATGAATTCTTCTTCATCTTCGAATCCTCGATGGGTCTATGACGTGTTCATCAACTCCAGAGAGGGCCATGGCAATGGCTCCAGCAGCTTCGTTTCTCAACTCTACAGTGCCCTCTCAAGTGCGAGAGTCCACACTTTCATGAATGAAAATGAGGGGCTTCGCAAGCGAAAGGAGGTGGGAAAAGGACTCACGCAAGCAATAGAAGGGTCTCGAATAGCTTTGGTTGTTTTCTCCAAAACCTACGCTGAATCTGCTCGGTGTCTTGATGAGTTGGTGAAGATCATGGATTGCCACCATGATTATGGGAAAACGGTTGTGCCCATTTTTTATGATGTTGATCCATTGGATGTATTTGAACAAAGTGGTGCTTTTGGAGAAGCCTTTGAAAAACTTACTGAAAACAGATTCCCTGGGAGAGGCATGGTTGATCTTTTGTTGAGGTGGGGAAGTGCACTCACCCATGCTGCACGTTTGACTGGTTGGGATACGAGGGATTGCAGGGATGAAGCTGATCAAGTAAAGAAAATAGTTGATGACGTGTTGGAAAAACTAGACAACGCATTGTTATCTACTGCCAAATTTCCAGTTGGATTGGAATCCCGTGCGCAGGAAGTGATTAGGTTTATAAACAATCAGTCAAGCAAAGTTTGTATGGTAGGGATCTTGGGAATGGATGGATTGGGTAAAACCACCTTAGCCAAAGCCATTTACAATAAGATTTGCCGCAAATTTGAGAGTAAGAGTTTCCTTGAAAATATTAAAGAAGTTTGTGAAAATAACAATAATAGAGGGCTTATTCGTTTACAAGAACAGCTTTTTTCATGTGTCTTTAAAAGAAAAATTAAAATTGATAGCATTGAACTGGGGAAAAAAAATTTTAGGTATGGAATTCTTGGGAAAAGGGTACTCATGGTACTGGATGATGTGACTGAGTATGAGCAATTAAAAGCCCTGTGTGGAAGCCATGAAAGGTTAGGTTTAGGAAGTGTATTAATTGTTACAAGCAAAGATGAACACCTACTTGATTTGCTTAAAGTTGACCATGTCTTCAAAATAAAGGAAATGGATGAAAATGATTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGAAAAGCAATTCCAAGAGAAGACTTCATTGAACTCTCAAGAAAAGTTGTTGCTTACTGTGGAGGAATACCACTGGCTCTTGAAGTCCTTGGATCTTACTTATATCGGAGGACAAAAGAAGAATGGGAAAGCGTATTGCTAAAACTAGAGAGAATTCCCAATGATCAAGTGCAAGAGAAATTTAGAATAAGCTTTGATGGTTTAGATGATAAGGAAAAATGTATATTTCTTGACATATGTTGTTTCTTTATGGGCTTTGACAGAGCCTATGTCACTGAGATACTAAATGACAGTGAATTTTATCCTAAAATTCGAATAGCAGTACTGGTGGAAAGGAACCTCATTAAAGTTAAAAAGAATAACAAGCTGGGAATGCATGGTTTGCTACGTGACTTGGGAAGAGAAATGATTTCTGAATGTTCACCTAAGGAAGCTGAGAAGCGTAGTCGGTTGTGGTTTCATGAGGATGTACTTGATGTCATGACAAAACATACTGGAACTAACACTATTGAGGGCTTGGCTTTGCAATTGGAAAGGAGTCAAGTTTGCTTCAATACCAAAGCATTTGAGAAAATGGTGAGATTAAGACTTTTGAAACTGAATCATGTACAACTTTCTGGAGATGATAAGTATCTTCCCCAACACCTGAGATGGGTCTATTGGCATGGATTTCCCTTAAAACACCTACCTGACAGTTTTGATCAGCGAAAGGTAGTTGCTATTGACTTAAAATATAGCAATATTAGTCTACTATGGAAAGAGCCTAAGTTGTTGGAGAGGCTAAAAATTCTCAATCTTAGTCATTCGTTGTACTTGACACACACCCCTGATTTTTCAAACATGCCAAATCTTGAAAAGCTCATTCTCAAAAATTGCCCAATATTGTCCATGGTACATGAATCCATTGGAGATCTAAGTAATATTCTCGTTATAAATTTAAAGGACTGTACAAGCCTTTGGAATCTCCCAAGGAGGATCTATCAGTTGACATCTTTGAAAACGCTAATCCTTTCTGGTTGTTCAAACATTGACAAGTTGGAGGATACAGCACAGATGGAATCTTTGACTACACTGATTGCAGACTGTGTGAGAGATATCCCTGGTTCAACAGTAAGATCAAAAAGGGTTGGGTATTTATCCTTGTATGGATATGAAGGTTTAGCACGTGATGTATTTCCCTCAATCATTTGGTGTTGGACAACACCAACATCGAACCCCTTATTTCATCTATCACAGGGCTTGTCATCATCTCTAGATTCCATGGATCTGCAGTATATTAATGTGGGTCATATAGCATCAATGCTTAACAGACTTTCAAAACTTCGAAGTGTTCGGGTGCAATGCAGCTCTAAGGCTCAACTGAGTCGTGAATTAAGAATTCTATATGACCTATATGGTGTCAATTTTACTAAATTGGAAACATCATGTGGACCACAAGTTTCAGATTTTTCCTTGAGATCACTTTTGATTGGATTGGGAAGTTACCACATAGTTACAGACACTCTTGTCAAGAGTATATCACAGGGATTAACTATCGGCGTGTCTGCTGATTTTTCACTCCCGGGGGACAATTGTCCTTATTGGTTAACCTATACAGGTGAAGGACATTCAGTATATTTCAAGGTACCTGAAGTTAGTTATTGCGGCATGAAGGGAATGGTTTTCAGGGTTATTTATTCATCTACCCTTGAAAGTGTGACAGCTCAGTGTATTGTTAGTGTCTTGATCGTTAATTACACAAAGTGCATCTACCATATATACAAGCGAGACACATCAATTTCCTTTAATAATGAGGATTGGCAGGGGATAATATCTAACCTTGGACCTGGTGACAAAGTTGGAATTTTTGTAGCTTTTGGGAATGGATTCACTGTCAAGAAGACAAGTGCCTATCTAATATATGATGAATCAATTGACATGATGAGTCGGCCTTCCCCTAAGCTAAAGAAAATGCGTCTATTAGATTTGTAG 3183 0.3883 MFSSSSNPRWVEFFHQPLNSSSSTNPRWVEFFHQSMNSSSSSNPRWVYDVFINSREGHGNGSSSFVSQLYSALSSARVHTFMNENEGLRKRKEVGKGLTQAIEGSRIALVVFSKTYAESARCLDELVKIMDCHHDYGKTVVPIFYDVDPLDVFEQSGAFGEAFEKLTENRFPGRGMVDLLLRWGSALTHAARLTGWDTRDCRDEADQVKKIVDDVLEKLDNALLSTAKFPVGLESRAQEVIRFINNQSSKVCMVGILGMDGLGKTTLAKAIYNKICRKFESKSFLENIKEVCENNNNRGLIRLQEQLFSCVFKRKIKIDSIELGKKNFRYGILGKRVLMVLDDVTEYEQLKALCGSHERLGLGSVLIVTSKDEHLLDLLKVDHVFKIKEMDENDSLELFSWHAFRKAIPREDFIELSRKVVAYCGGIPLALEVLGSYLYRRTKEEWESVLLKLERIPNDQVQEKFRISFDGLDDKEKCIFLDICCFFMGFDRAYVTEILNDSEFYPKIRIAVLVERNLIKVKKNNKLGMHGLLRDLGREMISECSPKEAEKRSRLWFHEDVLDVMTKHTGTNTIEGLALQLERSQVCFNTKAFEKMVRLRLLKLNHVQLSGDDKYLPQHLRWVYWHGFPLKHLPDSFDQRKVVAIDLKYSNISLLWKEPKLLERLKILNLSHSLYLTHTPDFSNMPNLEKLILKNCPILSMVHESIGDLSNILVINLKDCTSLWNLPRRIYQLTSLKTLILSGCSNIDKLEDTAQMESLTTLIADCVRDIPGSTVRSKRVGYLSLYGYEGLARDVFPSIIWCWTTPTSNPLFHLSQGLSSSLDSMDLQYINVGHIASMLNRLSKLRSVRVQCSSKAQLSRELRILYDLYGVNFTKLETSCGPQVSDFSLRSLLIGLGSYHIVTDTLVKSISQGLTIGVSADFSLPGDNCPYWLTYTGEGHSVYFKVPEVSYCGMKGMVFRVIYSSTLESVTAQCIVSVLIVNYTKCIYHIYKRDTSISFNNEDWQGIISNLGPGDKVGIFVAFGNGFTVKKTSAYLIYDESIDMMSRPSPKLKKMRLLDL* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0264 1060 Pfam TIR domain 48 226 IPR000157 GO:0007165
Apr10g0264 1060 Gene3D - 219 384 IPR027417 -
Apr10g0264 1060 Gene3D - 40 218 IPR035897 -
Apr10g0264 1060 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 59 1037 - -
Apr10g0264 1060 Gene3D Ribonuclease Inhibitor 515 880 IPR032675 -
Apr10g0264 1060 SUPERFAMILY "Winged helix" DNA-binding domain 460 565 IPR036390 -
Apr10g0264 1060 SMART till_3 47 193 IPR000157 GO:0007165
Apr10g0264 1060 SUPERFAMILY L domain-like 586 859 - -
Apr10g0264 1060 Gene3D - 389 473 IPR042197 -
Apr10g0264 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 1037 IPR044974 GO:0006952
Apr10g0264 1060 PRINTS Disease resistance protein signature 253 268 - -
Apr10g0264 1060 PRINTS Disease resistance protein signature 331 345 - -
Apr10g0264 1060 PRINTS Disease resistance protein signature 424 438 - -
Apr10g0264 1060 PRINTS Disease resistance protein signature 731 747 - -
Apr10g0264 1060 Pfam NB-ARC domain 238 457 IPR002182 GO:0043531
Apr10g0264 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 483 IPR027417 -
Apr10g0264 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 38 196 IPR035897 -
Apr10g0264 1060 ProSiteProfiles TIR domain profile. 46 219 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0264 Apr-Chr10 6340668 6346541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0264 27 773 WRKY Transcription Factor Family AT4G12020 28.831 3.37e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0264 - - aprc:113850724 1131.32