Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0259 ATGGCCAAGACATGTTGCAGTTTGTGTTTGGTCTTTCTTCACGTTTTCCTTTGCTTTGTGTTAACCATTTCAGCACCTGAAAGTGCCATTGTAACACAGGTTCCTGGCTTCAATGGCACTCTACCTTCAAAGCACTATGCTGGGTACGTGACAGTGGATGAAAGTCATGGACGGAACTTGTTTTACTATTTTGTTGTGTCAGAGGGAAAGCCTTCTGAGGACCCTGTGGTTCTGTGGCTTAACGGCGGACCTGGGTGCTCTAGCTTTGATGGATTCATATATGAGCATGGTCCTTTTAATTTTGAAGCAGCAAAGACAAAGGGAGGCCTTCCCACGCTGCATCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTGTCATATATTTGGATTCTCCAGCTGGTGTGGGGTTTTCATACTCTGAGAATAAAACTGATTACATAACAGGAGACTTAAAGACTGCCTCTGACACACATGCCTTTCTGCTTAAGTGGTTTGAACTATACCCTGAGTTCCTTACCAACCCATTCTTCATCGCTGGAGAGTCATATGCTGGAGTTTATGTACCTACTCTTGCTTTTGAAGTAGTGAAAGGAATTGATGCTGGCGTCAAGCCCAAACTGAATTTAAAGGGTTATATGGTTGGAAATGGTGTTACAGATGAAATGTTTGATGGCAATGCTCTTGTTCCATTTGTGCATGGGATGGGTCTTATCTCAGATGATCTGTTTGAGGAGGTTAACACTGAGTGCAAAGGAAATTTTTACAATCCAACAAGTGATAATTGTGCTTTCAAGCTTCAAAAAGTTGATCAGGACATTGATGACATAAACATATATAACATTCTAGAACCATGCTATCATGGCACAGAGACACAGAAGATTACAGCATCCTATATTAGATTGCCATCTAGCTTCCGGAAGTTAGGTGAGACTGAAAGACCTTTTCCTGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTAAGAGCACCTGTTAGACATGGAATTGTACCAACTTGGCCGCAGCTGAACAATCTTAACCATGCTCCACCATGCACTGATGATGAGATTGCAGACACATGGTTGAACAATGAAGCAGTCAGGAAAGCAATTCATACTGCACAGAAAAGTGTTGTCAGTAGCTGGGAACTTTGCACAGACATAATTTCCTTTGATCATGATGCTGGGAGCATGATCAAGTACCACAAGAACTTAACCTCCAAAGGGTATCGAGCACTTATATTCAGTGGTGATCACGACATGTGTGTTCCATTTACTGGGAGTCAAGCATGGACAAGATCAGTGGGCTACAAGATTGTTGATGAATGGAGGCCTTGGATGTCCAATAATCAAGTTGCTGGGTTTACACAAGGATATGACAAAAATCTTACTTTTCTGACCATAAAGGGAGCTGGGCATACTGTTCCGGAATATAAACCAAGAGAGGCTTTGGATTTTTATAAACGCTTTCTTTCTGGATTGCCAATATGA 1491 0.4232 MAKTCCSLCLVFLHVFLCFVLTISAPESAIVTQVPGFNGTLPSKHYAGYVTVDESHGRNLFYYFVVSEGKPSEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTKGGLPTLHLNPYSWSKVSSVIYLDSPAGVGFSYSENKTDYITGDLKTASDTHAFLLKWFELYPEFLTNPFFIAGESYAGVYVPTLAFEVVKGIDAGVKPKLNLKGYMVGNGVTDEMFDGNALVPFVHGMGLISDDLFEEVNTECKGNFYNPTSDNCAFKLQKVDQDIDDINIYNILEPCYHGTETQKITASYIRLPSSFRKLGETERPFPVRKRMFGRAWPLRAPVRHGIVPTWPQLNNLNHAPPCTDDEIADTWLNNEAVRKAIHTAQKSVVSSWELCTDIISFDHDAGSMIKYHKNLTSKGYRALIFSGDHDMCVPFTGSQAWTRSVGYKIVDEWRPWMSNNQVAGFTQGYDKNLTFLTIKGAGHTVPEYKPREALDFYKRFLSGLPI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0259 496 Pfam Serine carboxypeptidase 35 493 IPR001563 GO:0004185|GO:0006508
Apr10g0259 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Apr10g0259 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 493 IPR001563 GO:0004185|GO:0006508
Apr10g0259 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Apr10g0259 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Apr10g0259 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Apr10g0259 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Apr10g0259 496 Gene3D - 349 495 - -
Apr10g0259 496 Gene3D alpha/beta hydrolase 23 314 IPR029058 -
Apr10g0259 496 SUPERFAMILY alpha/beta-Hydrolases 31 495 IPR029058 -
Apr10g0259 496 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Apr10g0259 496 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 18 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0259 Apr-Chr10 6248130 6254470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0259 357 496 Calmodulin-binding Proteins AT2G22960 48.571 3.76e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0259 K16296 - gmx:100792057 909.057