Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0249 ATGGAAAACGTTCCATTTGCTATTGCTTCTAATCTCATTCACAGGTTGGCTTCCACAGATTTTCTTGAATTTGGAAAGCATTATGATGTGACGGAAGAGTTGGAAGAGCTTAAGAACACTGTTGAATGCATCAACGATAAGCTCCTTGATGCCGAAGACAAACAAGATCAAGACGGTGGTGTGCGCGTCTGGATCAGAAGGTTCAAAAAAGTGCTTCATGCTTCAGATGACTTCTTAGATGACCTTGCTATCGAATTTAGGAGAGACAAAATGGGTGCAGGCGAAGGAAACGAAGTAAACAGGGTACTTCGTTCCATTTCATCTTCAAATCAACTTCCTTTATACAGTGAAACGCGTGACAAAATTAAAGTAATACGAGCAAGTTTTAACGAAGTAGTGAAAGCAATGAAGGAGTTGAATTTAATCTCAAGTTCTATGCTGGTTAAGCAAAGTGAATGCAGGGAAACAGATTCTTTTGTGGTAGAATCTGATATCATTGGAAGAGAGCATAGTAAAGAGGAGATTATTGGTCTGTTGAGACAACCACATGAAAAGCAAACAGTTTCTGTGATTGCCATTGTTGGCCTTGGTGGTTTGGGTAAGACAGCTCTTGCTCAATTGGTGTATAATGAATTGAAAAAGCAGAATTCTTTTGAAATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTTAAAACTATTCTGAAGAAAATAATAGAATCAATTACTCGTTGCCAAATAGCAGTCGGGTTATCGTTAGACTACTTGCAAGAAAAGCTTCGTCAAAATTTAAGTGGTAAGAAATATTTGTTGGTGCTGGATGACATTTGGAATGATAGTTATAAAAAATGGGCTGAATTGAGAAAGTACCTGATGTGTGGCGCTCAAGACAGTAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCCAAGGCAATGACTGCTAGCACTTCCTATCATTTGCAAGGTTTGACCGATGAAGAATCTTGGAGTTTGTTGAAAAACATTGCATTTGAAGATGATTCCAAAGGAGTGAATAAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAGAAATGTAAAGGGGTTCCACTAGCAGTTAAAACGCTGGGAGGCCTGTTACGAGGACAAAACGAAGAAAGTGAATGGGAAAATGTTTTACGCGGTGACTTCTGGAAATTATGCGAAGAGCAAGATAGTATCATGCCAATTCTAAAACACAGTTACCAAAACTTGTCCCCCGAGATGAGACAATGTTTTGCTTACTGCTCTTTATATCCCAAGGATTCAGAAATTTCAAAGGATGAGTTGATTCAGTTGTGGATGGCACAGGGTTACCTTAAATGTTCAACTGAAAAACAGCAGATGGAGGATGTCGGTAACCAATTTGTAAAGATATTTTTGATGAACTCATTTTTTCAAGATGCAAAAAGTGAGTACGGTGAGGTCATTAGCTTCAAAATGCACGATTTAATGCATGATCTTGCAATGCTTGTTGGTGGCAATGATTATTGTTCCTTGGATAGTAAGGCAGAAAAAGTTGAAAGTAAACCCATGCACGTGTCGTTTGAACCTGAGGCCATTCATTTACTGGATTCATTGAATGCAAGCAGGCTACGAACTTTGATTTTACTGAGGTATTGCTTTCGAGAGAAGGAATTGAATGTTGTTGCTAATTTTAAATACTTACGCGTCCTGAGGATGTCATCCTTTTCCTTCTGCAAGTTGTTTGATTCAATTGAAAAATTAAAGCATTTAAGATATCTTGACATCCTTGATGATTTCTTCTTGAGTGGAATGCCAGTTGGGTTGGGAAAGTTGTGCTGGTTGCAATTCTTATCAATCTTTGTTGTGGGAGACAGCCAACAAACAAAATATGGCACACTAAATGAATTGAAAGACTTAAACTTAAGAGGAGAACTAAGTATTGAGCATCTCGATCGTGTCAGAGACGTGGCTCTGGAATCACATAATGTAAATTTAAGAGAAAAAAAATTCCTTCGTTCGTTGACTCTACGTTGGTTTGGAGACATCATCGGTAACAGTGACAGCTTACAATTATTAGAAAACCTTGAGCCCCACAGTAATCTTAAGCGATTGATTGTGCACTGTTATCCAGGTGTGCTTTTCCCACATTGGCTTTCTCTCCTCACAAATGTTATTGACATCACTCTCCTTGCGTGTGATAATTGTCGGTATCTCCCACCTTTGGAACGTCTCCCGTCCCTGAGGTCACTTGATATACAGCTTCTTGATGAATTGGAATACATAGATCTATACGAAGATGGTTCTACAGTAACCTTCTTCCCCTCTTTGGACAGCCTCCTATTAAGAGGTTGTCCCAAGCTGAGAGGATGGCGGAGGCGAGGAGATGATATGAATGATTCACATGATCTCTCCTTACCTCTTTCATTTCCTCTTCTTTCTCGACTGGAAGTCTCTAAATGTCCACAGTTGACTTGCATGCCTACTTTTCCAAACGTTAAGGATTTAAGATGGGGTACCAGCAGTGCAGAGCCATTAATAGCAACGCTAAACTCAACTGACTCATCTTCCTCCGCTGCTCCTCTTTCCATGCTCAAAGCACTGAGATTTCCTGATCCTATGAATTTACCAAAGGGTTGGATGCAAAATCTGACCTCTCTCGAGTTTCTTGGAATTGCAGGGTGTAGAAGTGAAACACTGGAGGCATTTGAAACTGGGTTCAAGGACGACACCAGCTGCCTTCCTTCTCTGCAAAAAATCAGCATATTTGGCTGTGAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGCATATCAAAATCATACGCTGCCCAAAATTGGCATCGCTGCCCGAAGGAATGAGTGTTCTTACCAACTTAAAGATCTTTGAGGTTAACAAATGCTCCCTCTTACTTGAAGATTGCCGAACAGAGACAAGTGCTGTTAGTCGCCAAATCGCACACATCCCACAAATTATCCTTAGTGATTTATAA 2997 0.3991 MENVPFAIASNLIHRLASTDFLEFGKHYDVTEELEELKNTVECINDKLLDAEDKQDQDGGVRVWIRRFKKVLHASDDFLDDLAIEFRRDKMGAGEGNEVNRVLRSISSSNQLPLYSETRDKIKVIRASFNEVVKAMKELNLISSSMLVKQSECRETDSFVVESDIIGREHSKEEIIGLLRQPHEKQTVSVIAIVGLGGLGKTALAQLVYNELKKQNSFEMQMWVCVSDNFDVKTILKKIIESITRCQIAVGLSLDYLQEKLRQNLSGKKYLLVLDDIWNDSYKKWAELRKYLMCGAQDSKILVTTRSENVAKAMTASTSYHLQGLTDEESWSLLKNIAFEDDSKGVNKNLESMGKEIAKKCKGVPLAVKTLGGLLRGQNEESEWENVLRGDFWKLCEEQDSIMPILKHSYQNLSPEMRQCFAYCSLYPKDSEISKDELIQLWMAQGYLKCSTEKQQMEDVGNQFVKIFLMNSFFQDAKSEYGEVISFKMHDLMHDLAMLVGGNDYCSLDSKAEKVESKPMHVSFEPEAIHLLDSLNASRLRTLILLRYCFREKELNVVANFKYLRVLRMSSFSFCKLFDSIEKLKHLRYLDILDDFFLSGMPVGLGKLCWLQFLSIFVVGDSQQTKYGTLNELKDLNLRGELSIEHLDRVRDVALESHNVNLREKKFLRSLTLRWFGDIIGNSDSLQLLENLEPHSNLKRLIVHCYPGVLFPHWLSLLTNVIDITLLACDNCRYLPPLERLPSLRSLDIQLLDELEYIDLYEDGSTVTFFPSLDSLLLRGCPKLRGWRRRGDDMNDSHDLSLPLSFPLLSRLEVSKCPQLTCMPTFPNVKDLRWGTSSAEPLIATLNSTDSSSSAAPLSMLKALRFPDPMNLPKGWMQNLTSLEFLGIAGCRSETLEAFETGFKDDTSCLPSLQKISIFGCERLKALPDWICNLSSLQHIKIIRCPKLASLPEGMSVLTNLKIFEVNKCSLLLEDCRTETSAVSRQIAHIPQIILSDL* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0249 998 Pfam Rx N-terminal domain 12 98 IPR041118 -
Apr10g0249 998 PANTHER OS05G0414200 PROTEIN 32 895 - -
Apr10g0249 998 Gene3D - 149 320 IPR027417 -
Apr10g0249 998 Pfam NB-ARC domain 168 412 IPR002182 GO:0043531
Apr10g0249 998 SUPERFAMILY L domain-like 478 979 - -
Apr10g0249 998 Gene3D - 410 498 IPR036388 -
Apr10g0249 998 Gene3D Ribonuclease Inhibitor 833 985 IPR032675 -
Apr10g0249 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 424 IPR027417 -
Apr10g0249 998 Gene3D - 324 409 IPR042197 -
Apr10g0249 998 PRINTS Disease resistance protein signature 190 205 - -
Apr10g0249 998 PRINTS Disease resistance protein signature 264 278 - -
Apr10g0249 998 PRINTS Disease resistance protein signature 361 375 - -
Apr10g0249 998 PRINTS Disease resistance protein signature 878 894 - -
Apr10g0249 998 Gene3D Ribonuclease Inhibitor 523 832 IPR032675 -
Apr10g0249 998 PANTHER DISEASE RESISTANCE PROTEIN RP 32 895 IPR044974 GO:0006952
Apr10g0249 998 Coils Coil 34 54 - -
Apr10g0249 998 Gene3D - 9 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0249 Apr-Chr10 5863888 5870920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0249 188 448 WRKY Transcription Factor Family AT5G45050 24.088 1.01e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0249 - - aprc:113850647 1353.58