Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0247 ATGGATTTGGAAGCTGTAGCAGAAACTGTTAAAAATTCTGCTGGGAAAATATCAGCTGGATGTGAAGTCAATTCGATCGAGGAACCGAGTGTTGGTATGGAGTTTGTGTCTGAAGAGGCTGCCAAGCACTTTTATGATGAATATGCAAGACGGGAAGGATTCATTGTGCGCCTTGATCGTTGTCATCGTTCTGAACTTGACAACCGAATCATTTCTCGCCGTTTTTCGTGCAATAAGCAGGGTTTTCACGTGCGAGGTAGAAATGGAATCAAGCCTGTTCATAAGCCACGAACTAGCATAAGAGAAGGCTGTGAGGCTATGATGTTGGTTAAATTTAATAAATGTGAGAAGTGGGTGATTACTAAATTTGTAAAGGAACATAATCATCCGCTAAATGCTTCTGGTTTACCTGCATATAATAGATTGATGGAATCAAAGGATAGGAAGATACTACAACTCACGAAGGAACTCGAGCAACGAGATCGACTATGTCAACAATATCGCAGGCTGCTACTTTCCCTTATGGAAACTGTTGAGGAACAAACAGAATGTTTATCAAGAAAAGTTGAACATGTTGTTAACAATGTCAGACAACTTCAGAATGAAGTGCAAAAACCTTTGAACACTGACTAA 633 0.3997 MDLEAVAETVKNSAGKISAGCEVNSIEEPSVGMEFVSEEAAKHFYDEYARREGFIVRLDRCHRSELDNRIISRRFSCNKQGFHVRGRNGIKPVHKPRTSIREGCEAMMLVKFNKCEKWVITKFVKEHNHPLNASGLPAYNRLMESKDRKILQLTKELEQRDRLCQQYRRLLLSLMETVEEQTECLSRKVEHVVNNVRQLQNEVQKPLNTD* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0247 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 208 - -
Apr10g0247 210 Coils Coil 182 202 - -
Apr10g0247 210 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 2 208 - -
Apr10g0247 210 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0247 Apr-Chr10 5852123 5854372 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr10g0247 FAR1 3.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0247 - - pvu:PHAVU_010G032600g 316.235