Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0237 ATGGCTGAACAAATTCCATTTGCTGTTACTTCAAATCTCATTCGCAGGTTGGCCTCCGTAGATTTTATTGAATTTGGAGAAGAGTATGGGGTGAAGGAAGAGTTGGAAGAGCTTAAGAAGACAATTGAATCTATCAATGATGTGCTCCTTGATGCTGACCACAAACAAGATCAAGTTCGCGTACGTAATTGGATATCTGACTTCAAAGAAGTACTCCATGATGCAGATGATTTCTTAGATCACCTTGCTATTGAATTTAGGAAAGACAAATTGGGTGCAGCCGAAGGAAAAGAAGTAAACAGGGTACTTCTTTCCATTTCATCTTCAAATCAATTTCCTTTATACACTGAAATGCCTGACAAAATTAAAGAAATACGAGAAAGTTTTAACGGTGTAGTAAAAGAAATGAAGGATTTGAATTTGTGCCCAAGATCTATTGTGGTCAAGCAAACTGATAGTGGATGGAGGGAAACATGTTCTTTTGTGTTAGAGACAGATATCATTGGAAGAGATGATAGTAAAAAGGAGATTATCAGTATGTTGAGACAACCTCATGAAAACCAAAAAGTTTCTGTGATTGCCATTGTTGGCCTTGGTGGTTTGGGGAAGACAGCTCTTGCTCAATTGGTGTATAATCACGTAGAAGTGCAGGAATTTTTTGAAAAGCAAATGTGGGTGTGTGTATCTGATAACTTTGATGTGAAAACTATTCTGGAGAAAATATTAGTATCAATTACTCGTTGGTTACCGTTAGATTACTTGCAAGAAGAGCTTCGTCAAAATTTAAGTTGTAAAAAATATTTGTTGGTGCTGGATGACATTTGGAATGATAGTTATAAAAAATGGGCTGAATTGAGAAAGTACTTGATGTGTGGCGCTCAAGATAGCAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAAGGCAATCACTGCTAGCACTTCCTATCATTTGCAAGGTTTAACTGATGAAGAATCTTGGAGTTTGTTGAAGAACATTGCATTTGATGATGATTTCAACGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTGACAGTTAAAACCTTGGGAGGCCTGTTACGAGGACAAGACGAAGAAAGTGATTGGGAGAATGTTTTACGTGGTGACTTCTGGAAATTATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTACTGCTCTTTATACCCAAGGATTCAGAAATTGAAAAGGATGAGCTGA 1305 0.3716 MAEQIPFAVTSNLIRRLASVDFIEFGEEYGVKEELEELKKTIESINDVLLDADHKQDQVRVRNWISDFKEVLHDADDFLDHLAIEFRKDKLGAAEGKEVNRVLLSISSSNQFPLYTEMPDKIKEIRESFNGVVKEMKDLNLCPRSIVVKQTDSGWRETCSFVLETDIIGRDDSKKEIISMLRQPHENQKVSVIAIVGLGGLGKTALAQLVYNHVEVQEFFEKQMWVCVSDNFDVKTILEKILVSITRWLPLDYLQEELRQNLSCKKYLLVLDDIWNDSYKKWAELRKYLMCGAQDSKILVTTRSENVAKAITASTSYHLQGLTDEESWSLLKNIAFDDDFNGVNQNLESMGKEIAKKCKGVPLTVKTLGGLLRGQDEESDWENVLRGDFWKLCEEQDSIMPILKLSYHNLSPEMRQCFAYCSLYPRIQKLKRMS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0237 434 Pfam Rx N-terminal domain 11 97 IPR041118 -
Apr10g0237 434 PRINTS Disease resistance protein signature 192 207 - -
Apr10g0237 434 PRINTS Disease resistance protein signature 261 275 - -
Apr10g0237 434 PRINTS Disease resistance protein signature 358 372 - -
Apr10g0237 434 Gene3D - 321 411 IPR042197 -
Apr10g0237 434 Coils Coil 35 55 - -
Apr10g0237 434 PANTHER OS05G0414200 PROTEIN 32 426 - -
Apr10g0237 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 421 IPR027417 -
Apr10g0237 434 PANTHER DISEASE RESISTANCE PROTEIN RP 32 426 IPR044974 GO:0006952
Apr10g0237 434 Pfam NB-ARC domain 171 409 IPR002182 GO:0043531
Apr10g0237 434 Gene3D - 9 137 - -
Apr10g0237 434 Gene3D - 157 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0237 Apr-Chr10 5701773 5709010 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0237 190 418 WRKY Transcription Factor Family AT5G45050 26.033 1.03e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0237 - - aprc:113851393 837.025