Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0233 ATGCGCATAGGGCTTTTGCTTCCTCCGTTCCCAATCTCAAAATCTACACATTGCAGCTTCATATTCAAACACGAAGGAGCCTTCTCTCTCTCTCTCTCTCTCTCGATCATTTCAGGGATGGCTGAACCAATTCCATTTGCTGTTACTTCAAATCTCATTCACAGGTTAGCTTCCGCAGATTTTCTTGAATTTGGACAGGAGTATGCTGAGTATGGTGTGATGGAAGAGTTAGAAGAGCTTAAGAACACTATTGAATCCATCAATGGTAAGCTCCTTGATGCCGACGATAAACAAGAGCAAGACGATGATGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTCCATGCTGCAGATGACTTCATAGATGACCTTGCTATCGAATTTAGGAGAGACAACATGGGTGCAGCCGAAGGAAAAGAAGTAAACAGGGTACTTCGTTCCATTTCATCTTCAAATCAACTTCCTTTATACAGTGAAATGCGTGACAAAATTAAAGTAATACGAGAAAGTTTTAACGATGTAGTGAAAGAAATGAAGGATTTGAATTTAATCTCAAATTCTATGCTGGTTAAGCGAAGTGAATGCAGGGAAACAGATTCTTTTGTGATAGAATCTGATATCATTGGAAGAGATGATAGTAAAGAGGAGATTATCAGTCTGTTGATACAACCTCATGAAAACCAAAAAGTTTCTGTGATTGCCATTGTTGGCCTTGGTGGTTTGGGGAAGACAGCTCTTGCTCAATTGGTGTATAAGGAATTGGAAGAGCAGAATTATTTTGAAATGCAAATGTGGGTGTGTGTCTCTGATAAGTTTGATGTTAAAACTATTCTGAAGAAAATATTAGAATCAATTCATGATGGCCAAAGACAGGACCAATCATTAGAGAAGTTGCAAAAAGAGCTTCGTAGAAGTTTAAGTGGTAAGAAATATTTGTTGGTCTTGGATGACATTTGGAATAAGAGTCATAAAAAGTGGGCTGAATTGAGAAAGTACCTGATGTGTGGTGCTCAAGATAGCAAGATTTTAGTGACAACTCGAAGTAAAAATGTAGCAAAGGTAATGACTGCTAGCACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGAATCTTGGAGTTTGTTGAAGAACATTGCATTTGAGGATGATTCCAAAGTCAATCGAAATCTAGAATCAATTGGGAAAGAAATAGCCAAAAAATGCAAAGGGGTTCCACTAGCAGTTAAATCGCTGGGAGGCCTGTTACTAGGACAAAACCAAGAAAGTGGATGGGAGAATGTTTTACACGGTGACTTCTGGAAATTATGTGAAGAGCAAGATAGTGTTATGCCAATTCTAAAACTCAGTTACCACAACTTGTCATCAGACATGAGACAATGTTTTGCTTTTTGCTCTTTGTACCCCAAGGATTCAGAAATTCCGAAGGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCAACTGAGAAACAGTGCATGGAGGATGTGGGTAATCAATTTGTAAAGATGCTTTTGATGAACTCATTCTTTCAAGATGCAGAACGATGA 1563 0.3852 MRIGLLLPPFPISKSTHCSFIFKHEGAFSLSLSLSIISGMAEPIPFAVTSNLIHRLASADFLEFGQEYAEYGVMEELEELKNTIESINGKLLDADDKQEQDDDVRVWIRRFKKVLHAADDFIDDLAIEFRRDNMGAAEGKEVNRVLRSISSSNQLPLYSEMRDKIKVIRESFNDVVKEMKDLNLISNSMLVKRSECRETDSFVIESDIIGRDDSKEEIISLLIQPHENQKVSVIAIVGLGGLGKTALAQLVYKELEEQNYFEMQMWVCVSDKFDVKTILKKILESIHDGQRQDQSLEKLQKELRRSLSGKKYLLVLDDIWNKSHKKWAELRKYLMCGAQDSKILVTTRSKNVAKVMTASTSYPLKGLTDEESWSLLKNIAFEDDSKVNRNLESIGKEIAKKCKGVPLAVKSLGGLLLGQNQESGWENVLHGDFWKLCEEQDSVMPILKLSYHNLSSDMRQCFAFCSLYPKDSEIPKDELIQLWMAQGYLKCSTEKQCMEDVGNQFVKMLLMNSFFQDAER* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0233 520 Gene3D - 192 362 IPR027417 -
Apr10g0233 520 Coils Coil 77 97 - -
Apr10g0233 520 Pfam NB-ARC domain 212 453 IPR002182 GO:0043531
Apr10g0233 520 Gene3D - 50 166 - -
Apr10g0233 520 PRINTS Disease resistance protein signature 233 248 - -
Apr10g0233 520 PRINTS Disease resistance protein signature 306 320 - -
Apr10g0233 520 PRINTS Disease resistance protein signature 402 416 - -
Apr10g0233 520 PANTHER DISEASE RESISTANCE PROTEIN RP 77 519 IPR044974 GO:0006952
Apr10g0233 520 CDD AAA 216 319 - -
Apr10g0233 520 PANTHER OS05G0414200 PROTEIN 77 519 - -
Apr10g0233 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 465 IPR027417 -
Apr10g0233 520 Gene3D - 451 519 IPR036388 -
Apr10g0233 520 Gene3D - 366 450 IPR042197 -
Apr10g0233 520 Pfam Rx N-terminal domain 69 133 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0233 Apr-Chr10 5587436 5592016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0233 231 489 WRKY Transcription Factor Family AT5G45050 23.381 6.61e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0233 - - aprc:113850647 725.702