Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0229 ATGCCTGACAAAATTAAACAAATAGGAGAAAGTTTTAACGGTGTAGCAAAAGAAATGAAGGATTTAAATTTGTGCCCAAGATCTATTATGGTCAAGCAAACTGATAGTGGATGGAGGGAAACATGTTCTTTTGTGTTAGAGACAGATATCATTGGAAGAGATGATAGTAAAAAGGAGATTATCAGTCTGTTGAGACAACCTCATGAAAACCAAAAAGTTTCGGTGATTGCCATTGTTGGCCTTGGTGGTTTGGGGAAGACAGCTCTTGCTCAATTGGTGTATAATCACTTGGAAGTGCAGGAATTTTTTGAAATGCAAATGTGGGTGTGTGTCTCTGATGACTTTGATGTAAAAACTATTCTGAAGAAAATATTAGAATCAATTACTGGGGACCAAATTGAAGTATCATTGGGCAACTTGCAAAGAAAACTTCATGAAAAAATAAGTGGTAAGAAATATTTGTTGGTCCTAGATGACACTTGGAACGATAGACATGACAAATGGGCTGAATTGAGAAAGTACTTGATGTGTGGCGCTCAAGATAGTAAGATTTTAGTCACAACTCGAAGTGAAAATGTAGCAAAGGCAATGACTGCTAGAACTTCCTATCCTTTGAAAGGTTTGACTGAACAAGAATCTTGGAGTCTGTTGAAGAACATTGCATTTGAGGACGGTTCCAGAGGAGTCAATCAAAATCTAGAATCAATAGGGAAAATAATAGCCAGAAGATGTAGAGGGGTTCCACTGTCAATTAAAACCTTGGGAGGCCTGTTACGAGGACAAAACGAAGAAAGTGAATGGAAGAATGTTTTACGCGGTGACTTCTGGAAATTATGTGAAGAGCAAGACAGTATCATGCCAATTCTAAAACTCAGTTACCGCAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTACCCCAAGGATTCAAAAATTCCAAAGGATGAGTTGATTCAATTATGGATGGCACAGGGTTACCTTAAATGTTCGACTGAAAAACAGCAAATGGAGGATGTCGGCAATCAATTTGTAAAGATATTTTTGATGAACTCATTTTTTCAAGATGCGGATAGTGAATACGGTGAGATCATTAGCTTTAAAATGCACGATTTAATGCATGATCTTGCGATGCTAGTAGCTGGCAATGATTATTGTTACTTTGATAGAAAGGCAGAAAAAGTTGAAGGTAGACCCATGCACGTATCATTGGAATCCTATGAGGCCATTCATTTGTTGAAATCATTAGATCCGAGCAGGCTGCGAACTTTGATTTTGCCGTATTACTTGGAAGAGGAATATTTGTCGGTTATTGCTGAGTTCAAATACTTGCGTGTATTGAGGATGCATAGTCTATCTGATTCCACCGAACATTTGAAGCATTTAAGATACCTTGCTCTAGCGCAACAAACAAGTCTTCCCAAATCCATGAGCAATCTTGTTTTCCTACAAACATTAAAATTGGAGAAAAATGTTTCTTTCCCACAATCATTAAAATTGCGGTGGTGCTTTGAAGATCCATTTTCAGAAGTAGTCACAAAATTGGTCAATTTGAGGTGCCTTGATACTGTTTACCGCTTGAATGGAATGGCAGTTGGGTTGGGAAAATTATACTCTATGCAATTTTTATCGAACTTTGTTGTGGGAGACAGCCAAGAAATAAAATATGCCACATTAAATGAACTGAAGGACTTAAGTCTCAGAGGCAGATTAAGAATTGAGCATCTCAATCGTGTCAGAGAAGTGGCTCTTGAATCACAGCACGTAAATTTAAAAGAAAAAGAATTCCTTCAATCCTTGACTCTGGATTGGTCTCGTGAAGACCTCTGTTACAGTGACAGCTTGCAATTATTGGAAAACCTTCAGCCCCACCGTAATCTTAAGCGATTGGAGGTGAATCATTATCTAGGCGTGCTTTTACCAAATTGGTTTTCTCTCCTCACAAATGTTGTTCACATCACTCTCAATGGGTTTGATAATTGTCGCTGTCTCCCACTATTGGAACGTCTCCCTTACCTGAAGTCACTTGATGTAGAGTTTCTTCGCGAATTGGAATATATATATACCTACGAAGATGGTTTTGGGGTAACCTTCTTCCCCTCTTTGGAGAGCCTCAAATTGTGGAGTTGTCCCAAGCTCAGGGGATGGCGGAGGCGGGGAGATGATATCAATGATTCACATAATCTCTCCTCTTCTCTTTCATTTCCTCATCTTTCTCAACTAAAAGCCCATTGCTGTCCACAGTTGACTTGGATGCCTACTTTTTCAAAAGTTAAGGTTTTAAAATGGTTTGAATGCAGTGCAGAGCCATTTAAAGGAACACTAAACACAGCAGCGTCAACATGTTCAGCCGACTCATCTTCCTCTGCTGCTCCTCTTTCCATGCTCAAACAATTGACGATTTCTGATTTTATGAATTTACCGGAAGGTTGGATGCAAAATCTGACCTCTCTCGAGTCTCTTCAAATTGAGGAGTGTAAAAGTGAAACACTCATGGAATTTGAAATTGGCTTTAAGGACGACACCATCTGCCTTCCTTCTCTGCGAAAAATCAGCATAAGTTGGTGTATAGAGCTAAAGGCTTTGCCAGATTGGATTTGCAGCCTCTCGTCGCTTCAGCACATCGAGATCTACGGTTGCTCAAAATTGGCATCGCTGCCCGAAAGAATGAATGGTCTTGCCAACTTAAAGATCTTTGAGGTCAGAAATTGTTGCCTCTTAATTAAAGAGTGCCGGAAAGAGAGAAGTGTTGTTAGTCGCCGAATCGCACACATCCCACAAATAATCCTTCATGATTACTGA 2811 0.3945 MPDKIKQIGESFNGVAKEMKDLNLCPRSIMVKQTDSGWRETCSFVLETDIIGRDDSKKEIISLLRQPHENQKVSVIAIVGLGGLGKTALAQLVYNHLEVQEFFEMQMWVCVSDDFDVKTILKKILESITGDQIEVSLGNLQRKLHEKISGKKYLLVLDDTWNDRHDKWAELRKYLMCGAQDSKILVTTRSENVAKAMTARTSYPLKGLTEQESWSLLKNIAFEDGSRGVNQNLESIGKIIARRCRGVPLSIKTLGGLLRGQNEESEWKNVLRGDFWKLCEEQDSIMPILKLSYRNLSPEMRQCFAYCSLYPKDSKIPKDELIQLWMAQGYLKCSTEKQQMEDVGNQFVKIFLMNSFFQDADSEYGEIISFKMHDLMHDLAMLVAGNDYCYFDRKAEKVEGRPMHVSLESYEAIHLLKSLDPSRLRTLILPYYLEEEYLSVIAEFKYLRVLRMHSLSDSTEHLKHLRYLALAQQTSLPKSMSNLVFLQTLKLEKNVSFPQSLKLRWCFEDPFSEVVTKLVNLRCLDTVYRLNGMAVGLGKLYSMQFLSNFVVGDSQEIKYATLNELKDLSLRGRLRIEHLNRVREVALESQHVNLKEKEFLQSLTLDWSREDLCYSDSLQLLENLQPHRNLKRLEVNHYLGVLLPNWFSLLTNVVHITLNGFDNCRCLPLLERLPYLKSLDVEFLRELEYIYTYEDGFGVTFFPSLESLKLWSCPKLRGWRRRGDDINDSHNLSSSLSFPHLSQLKAHCCPQLTWMPTFSKVKVLKWFECSAEPFKGTLNTAASTCSADSSSSAAPLSMLKQLTISDFMNLPEGWMQNLTSLESLQIEECKSETLMEFEIGFKDDTICLPSLRKISISWCIELKALPDWICSLSSLQHIEIYGCSKLASLPERMNGLANLKIFEVRNCCLLIKECRKERSVVSRRIAHIPQIILHDY* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0229 936 Gene3D - 293 381 IPR036388 -
Apr10g0229 936 SUPERFAMILY RNI-like 702 909 - -
Apr10g0229 936 Gene3D Ribonuclease Inhibitor 411 722 IPR032675 -
Apr10g0229 936 Gene3D Ribonuclease Inhibitor 737 924 IPR032675 -
Apr10g0229 936 SUPERFAMILY L domain-like 371 770 - -
Apr10g0229 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 307 IPR027417 -
Apr10g0229 936 Gene3D - 207 292 IPR042197 -
Apr10g0229 936 Pfam NB-ARC domain 54 294 IPR002182 GO:0043531
Apr10g0229 936 Gene3D - 40 203 IPR027417 -
Apr10g0229 936 PANTHER DISEASE RESISTANCE PROTEIN RP 3 834 IPR044974 GO:0006952
Apr10g0229 936 PANTHER OS05G0414200 PROTEIN 3 834 - -
Apr10g0229 936 PRINTS Disease resistance protein signature 75 90 - -
Apr10g0229 936 PRINTS Disease resistance protein signature 147 161 - -
Apr10g0229 936 PRINTS Disease resistance protein signature 244 258 - -
Apr10g0229 936 PRINTS Disease resistance protein signature 816 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0229 Apr-Chr10 5487846 5491061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0229 73 331 WRKY Transcription Factor Family AT5G45050 23.881 7.22e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0229 - - aprc:113851568 1863.2