Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0227 ATGGCTAAGTTTGAATCAGTGCCATTTGCTGTTGCATCAAATCTTATTCACAGGTTAGCTTCCCCAGATTTTCTTGAACTTGGACAGGAGTATGGTGTGATGGAAGAGTTGGAAGCGCTTAAGAAGACAATTGGATCTATCAATGATGTGCTGCTTGACGCTGACCACAAACAAGAACAAGTTCGTGTGCGTAATTGGATATCTGACTTCAAAGAAGTACTTTATACTGCAGATAACTTCTTAGATCACCTAGCTATCGAATTTACGAGAGAAAAACTGGATGCAGCAGAAGGAAAAGAGGTAAAACAGGTACTTCGTTCCATTTCATCTTCAAATCAAATTCCTTTATACAGTGAAATGCCTGACAAAATTAAAGAAATACGAGAAAGTTTTAACGATGCAGTAAAAGAAATGAAGGATTTGAATTTAAGTCCAAGATCAAAAGTGGTTAAGCAAACTAATAGTGAATGGAGGGAAACATGTTCTTTTGTGTTAGAGTCAGATATCATTGGAAGAGATGACAGTAAAAAGGAGATTATTAGTCTGTTGAGACAACCACATGAAAAGCAAAAAGTTTCTGTGATTGCGATTATTGGCATTGGTGGTTTAGGGAAGACAGCGCTTGCTCAGTTGGTGTATAATAACTTGGAGGTGCAGAATTCTTTTGAAAAGCGAATCTGGGTCTGTGTGTCCGATAACTTTGAAGTGAAAACTATTATGAAGAAAATATTACAATCAGTTACTCGTTGCCAGATAGCAGACGGGTCGTCACTAGACTACTTGCAAGAAGAACTTCGTGAAAATTTAAGTCATAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAATCGTAACAAATGGGCTGAATTGAGAAAGTACTTGATGTGTGGCTCTCAAGATAGCAAGATTTTAGTGACAACTAGAAATGAAAACGTAGCAAATGCAATGGCAGCTAGCACTTTCTATCATTTGAAAGGTTTGACTGACTTAGAATCTTGGAGTTTGTTGAAAAACATTGCATTTGAAGATGATTGCAAGGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAGTGTAAAGGGGTTCCACTAGCAGTTAAAACGCTGGGAGGCCTGTTACGAGGACAAAATGAAGAAAGTGAATGGGAGAATGTTTTACGTGGTGACTTGTGGAAATTATGCGAAGAGCAAGACAGTATCATGCCAATTCTAAAGCTCAGTTACCAAAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTATATCCCAAGGATTCAGAAATTCCAAAAGATGAGTTGATTCAGTTGTGGATGGCACAGGGTTACCTTAAATGTTCAACTGAAAAACAGCACATGTACATGGAAGATATCGGTAACCAATTTGTAAAATTTTTTTTGATGAACTCATTTTTTCAAGATTCAAAGAGTGATAAATATGGTGAGATCATTAGTCTCAAAATGCATGATTTAATGCATGACCTTGCAATGCTTGTTGCTGGCAATGATTGCTGTTACTTGGATAGCAAGGCAGAAAAAATTGAGGGTAGTCCCATACACGTATCATTGGAATTTGCTGAGGCCGTTCATTTGTTGAAATCATTAGATCCGAGCAGGCTGCGAACTTTAATTTTGCCATATGACTTCGAAGAGGAGGAATATTTGTCAGTTATTGCAAAGTTCAAATACTTGCGCGTATTGAGGATGCATCATCTCACTGATCCCACTGAAGATTTGAAGCATTTAAGATACCTTGTTTTAACCCAACAAACAAGTCTTCCCAAATTTATGAACAATCTTGTTTTCCTACAAACGTTCAAATTGAGGAATTGCGGTGAAGAATCCTTTTCTGAAGTGATCACAAAATTAGTCAATATGAGATGGCTTGAGGTTGGTGATTATGACTTCTTGAGTCGGATGGCAGTGGGGTGGGGAAAATTATCCTGGTTGCAATTCTTACCCGTCTTTGTGGTGGGAGGTAGCCAAGAAGGCACACTAAATGAATTGAAAGACTTGAACCTAAGGGGAGAGTTAGAAATTAAGCGGCTCGATCGTGTAAGAGATGTGGCTCTGGAATCACAAGATGTAAATTTAAAAGGAAAAAGATTCCTCCAATCCTTGACTCTGACTTGGTCGCATGGAGACATACGTAACAGTGACAGCTTGCAATTGTTAGAAAACCTTCAGCCCCATCATAATCTTAAGCGATTGAAGGTGCATTGTTATCCAGGCATGCGTTTCCCAGATTGGCTTACTCTCCTCATAAATGTTGTTGACATCTCTCTCTTCATGTTTCGTAATTGTCGCTCTCTCCCACCGTTGGAACGTCTTCCCTCCCTGAAGTCACTTGAGATAACTAATCTTGATGAATTGGAATACATATATCTTCATGAAGATGGTTTTGCAGTGACCTTCTGCCCCTCTCTAGAGAGCCTCACATTACGTTGTTGTTTTAAGCTCAAGGGATGGCGAAGGCTGGGAGATGATATCAATGATTCTAAAAATTCACAACATCTCTCCTTACGTCTTTCGTTTCCTCATCTTTCTCAATTACACGTCTCGTACTGTCCAAAGTTGACTTGCATGCCTACTTTTCCAAAAGTTAAGGTTTTGGATTTTTGTGAATGCACTGCGGAGCCATTAGTAGCAACACTAAACACAACAGCTTCAACATGTTCAGCTGACTCATCTTCTTCCTCCGCTGCTCCTCTTTCCATGCTCAAAGAATTGGACATAACTGATACTACGAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTTCGAATTGTATGGTGTAGAAGTGAAACACTCGAGGAATTTGAAACTGGATTCAAGGAAGACACCAACTGCCTTCCTTCTCTGCAAAAGATTTCATTATGTTATTGTAAAAACCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCCCTTCAAGAGATCACAATTGCACTCTGCCCAAAATTGGCGTCGCTGCCCGAAGGAATGAGTCGTCTTACCAACTTAAAGATCTTTAAGGTTGCGAGGTGTTCCCTCTTAGTTGAAGAATGCCGAACAGAGACAAGTCCTATAAGTCGCCAAATCGCACACATCCCACAAATTATCCTTAGTGATTAG 3156 0.3929 MAKFESVPFAVASNLIHRLASPDFLELGQEYGVMEELEALKKTIGSINDVLLDADHKQEQVRVRNWISDFKEVLYTADNFLDHLAIEFTREKLDAAEGKEVKQVLRSISSSNQIPLYSEMPDKIKEIRESFNDAVKEMKDLNLSPRSKVVKQTNSEWRETCSFVLESDIIGRDDSKKEIISLLRQPHEKQKVSVIAIIGIGGLGKTALAQLVYNNLEVQNSFEKRIWVCVSDNFEVKTIMKKILQSVTRCQIADGSSLDYLQEELRENLSHKKYLLVLDDIWNENRNKWAELRKYLMCGSQDSKILVTTRNENVANAMAASTFYHLKGLTDLESWSLLKNIAFEDDCKGVNQNLESMGKEIAKKCKGVPLAVKTLGGLLRGQNEESEWENVLRGDLWKLCEEQDSIMPILKLSYQNLSPEMRQCFAYCSLYPKDSEIPKDELIQLWMAQGYLKCSTEKQHMYMEDIGNQFVKFFLMNSFFQDSKSDKYGEIISLKMHDLMHDLAMLVAGNDCCYLDSKAEKIEGSPIHVSLEFAEAVHLLKSLDPSRLRTLILPYDFEEEEYLSVIAKFKYLRVLRMHHLTDPTEDLKHLRYLVLTQQTSLPKFMNNLVFLQTFKLRNCGEESFSEVITKLVNMRWLEVGDYDFLSRMAVGWGKLSWLQFLPVFVVGGSQEGTLNELKDLNLRGELEIKRLDRVRDVALESQDVNLKGKRFLQSLTLTWSHGDIRNSDSLQLLENLQPHHNLKRLKVHCYPGMRFPDWLTLLINVVDISLFMFRNCRSLPPLERLPSLKSLEITNLDELEYIYLHEDGFAVTFCPSLESLTLRCCFKLKGWRRLGDDINDSKNSQHLSLRLSFPHLSQLHVSYCPKLTCMPTFPKVKVLDFCECTAEPLVATLNTTASTCSADSSSSSAAPLSMLKELDITDTTNLPKGWMQNLTSLESLRIVWCRSETLEEFETGFKEDTNCLPSLQKISLCYCKNLKALPDWICNLSSLQEITIALCPKLASLPEGMSRLTNLKIFKVARCSLLVEECRTETSPISRQIAHIPQIILSD* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0227 1051 SUPERFAMILY L domain-like 495 871 - -
Apr10g0227 1051 Pfam Rx N-terminal domain 13 99 IPR041118 -
Apr10g0227 1051 SUPERFAMILY RNI-like 795 1026 - -
Apr10g0227 1051 Gene3D - 12 140 - -
Apr10g0227 1051 PRINTS Disease resistance protein signature 194 209 - -
Apr10g0227 1051 PRINTS Disease resistance protein signature 268 282 - -
Apr10g0227 1051 PRINTS Disease resistance protein signature 365 379 - -
Apr10g0227 1051 PRINTS Disease resistance protein signature 910 926 - -
Apr10g0227 1051 Gene3D - 328 413 IPR042197 -
Apr10g0227 1051 Gene3D Ribonuclease Inhibitor 896 1038 IPR032675 -
Apr10g0227 1051 PANTHER OS05G0414200 PROTEIN 37 947 - -
Apr10g0227 1051 PANTHER DISEASE RESISTANCE PROTEIN RP 37 947 IPR044974 GO:0006952
Apr10g0227 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 428 IPR027417 -
Apr10g0227 1051 Gene3D Ribonuclease Inhibitor 538 895 IPR032675 -
Apr10g0227 1051 Gene3D - 152 323 IPR027417 -
Apr10g0227 1051 Gene3D - 414 505 IPR036388 -
Apr10g0227 1051 Pfam NB-ARC domain 173 416 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0227 Apr-Chr10 5426463 5429625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0227 192 452 WRKY Transcription Factor Family AT5G45050 24.074 8.74e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0227 - - aprc:113850108 1468.37