Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0226 ATGGCTGAATCAATTCCATTTGCTGTTTCTTCAAATCTCATTCACAGGTTGGCCTCCGCAGATTTTCTTGAATTTGGACAGGAGTATGATGTGAAAAAAGAGTTGGAAGAGCTTAAGAAGACAATTGAATCTATCAATGATGTCCTCCTTGATGCTGACCATAGACAAGAACAAGTTCGTGTGCGTAATTGGATATCTGACTTCAAAGAAGTACTCCATGCTGCAGATGACTTCTTAGATGACCTTGCTATCGAATTTAGGAGAGGCAAATTGGGTGCAGCCGAAGGAAAAGAAATAAACAGGGTACTTCGTTCCATTTCATCTTCAAATCAACTTCCTTTATACAATGAAATGCCTGGCAAAATTAAGGAAATACGAGAAAGTTTTAACGGTGTGGTAAAAGAAATGAAGGATTTGAATTTATACCCAAGATCTATTGTGGTCACGCAAACTGATAGTGGATGGAGGGAAACATGTTCTTTTGTGTTAGAGACAGATATCATTGGAAGAGATGATAGTAAAATGGAGATTATTAGTCTGTTGAGACAACCTCATGAAAACCATAAAGTTTCTGTGATTGCCATTGTTGGCATTGGTGGCTTGGGGAAGACAGCTCTTGCTCAATTAGTGTATAATCAACAGGAATTGCAGGAATTTTTTGAGATGCAAATGTGGGTGTGTGTCTCTGATGTATTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAATTACTGGTGACCAAGTTGAAGACAAGTTATCATTAGGCAACTTGCAAAGAAAACTTCATGAAAAAATAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACATGACAAATGGGCTGAATTGAGAAAGTACCTGATGTGTGGTGCCCAAGGTAGTAAGATTTTAGCGACAACTCGAAGTGAAAATGTAGCAAAGTCAATGACTACTAGCACTTCCTATCCTTTGAAAGGTTTGACGGATGAAGCATCGTGGAGTTTGTTAAAGAATATTGCATTTGAGGATGATTCCGAAGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGCAAAGGGGTTCCACTAGCAGTTAAAACGCTGGGAGGCCTGTTACGGGGACAAAAGGAAGAAAGGGAATGGGAGAATGTTTCACGTGGTGACTTCTGGAAATTATGTGAAGAGCAAGATAGTATTATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTATATCCCAAGGATTCAAGAATTTCAAAGAATAAGTTGATTAAGTCATGGATGGCACAGGGTTACCTTAAATGTTCAACTGAAAAACAGCACATGGAGGATGTCGGTAATCAATTTGTAAAGATGTTTTTGATGGACTCATTTTTTCAAGATGCAGAAAGTAATGACTATGGTGAGATCATTCTTTTCAAAATGCATGATTTAATTCATGATCTTGCAATGCTTGTTTCTGGCAATGATTGCTGTTACTTGGATAGTAAGGCGGAGAAAGTTGAAGGTAGACCCATGCACGTATCATTGGAATCTGAAGAGGCCATTCATTTGTTGAAATCATTAGATCCGAGCAGACTGCGAACTTTGATTTTGCCGTATGACTTGAAAGAGGAGGAATATTTGTCGGTTATTGCAAAGTTCAAATACTTACGTGTCTTGAGGATGTCATCTTTTCCTTTCTACAGATTGTTTGATTCAATTGGAAAATTCAAGCATTTAAGATATCTTGACATAACTGATGATTACAACTTGAGTGGGATGCCAGTTGGGTTGGGAAAGTTGTGCTGGTTGCAATTCTTATCAATCTTTGTCGTGGGAGACAGCCAAGAAACAAAATATGGCACATTAAATGAATTGAAAGACTTAAACCTGAGAGGAAAATTAAAAATTCGGGATCTCGATCGTGTCAGAGACGTGGCTCTGGAATCACATGATGTAAATTTAAAAGAAAAAAAATTCCTTCGTTCCTTGACTCTAGATTGGTCGTATGAAAAGATCATCGGTAACAGTTTACAATTGTTAGAAAACCTTGAGCCCCACCATAATCTTAAGCAATTGACTGTGCATGGTTATCCAGGTATGCGTTTCTCAGATTGGCTCTCTCTCCTCACAAATATTGTTCACATCTCTCTCTCCGACCTTTGTAATTGTGGTTGTCTCCCACCGTTGGAACGTCTCCCTTACCTGAAGTCACTTAAGATTGACTGTTGTTTTGAATTGGAATACATATCTCTCTACGAAGATGGTTTTGCAGTAACCTTCTTCCCCTCTTTGGATAGCCTCAAATTATTTGATTGTCCCAAGCTCAGGGGATGGCGGAGGCGGGGAGATGATATCAGTGATTCACATAATCTCTCCTCATCTCTTTCATTTCCTCGTCTTTCTCAGCTGCAACTCTATCTCTGTCCACAGTTGACTTGCATGCCTACTTTTCCAAACGTTAAGGATTTAAGATGGCGTTATAGCAGTGCGGAGGCATTAATAGGAACACTAAACACAACTAGAACAGCGTTAACATGTTCAGCTGAATCATCTTCCTCCGCTGCTCCTCTTTCCATGCTCAGAGAATTGGGCATATCTGCTGATCCAATGAATTTACCAAAAGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTTGAAATTGAACGGTGTGACAGTGAAACACTTGAGGAATTTGAAACTGGGTTCAAGAACGACACCAACTGCCTTCCTTCTCTGCGAAAAATCAGCATATATGAGTGTGAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGCACATCAGGATCTACGATTGCCCAAATTTGGCATTGCTCCCCGATGGAATGCGTGGTCTTACCGACTTAAAGATCTTTGAGGTCATCTATTGTTCCCTCTTACTTAAAGAATGCCAAACAAAGACTGTTAGTCGCCAAATCGCACACATCCCACAAATCATCCTTCGTGGTGATTAG 3027 0.3938 MAESIPFAVSSNLIHRLASADFLEFGQEYDVKKELEELKKTIESINDVLLDADHRQEQVRVRNWISDFKEVLHAADDFLDDLAIEFRRGKLGAAEGKEINRVLRSISSSNQLPLYNEMPGKIKEIRESFNGVVKEMKDLNLYPRSIVVTQTDSGWRETCSFVLETDIIGRDDSKMEIISLLRQPHENHKVSVIAIVGIGGLGKTALAQLVYNQQELQEFFEMQMWVCVSDVFDVKTILKKILESITGDQVEDKLSLGNLQRKLHEKISGKKYLLVLDDIWNERHDKWAELRKYLMCGAQGSKILATTRSENVAKSMTTSTSYPLKGLTDEASWSLLKNIAFEDDSEGVNQNLESMGKEIAKKCKGVPLAVKTLGGLLRGQKEEREWENVSRGDFWKLCEEQDSIMPILKLSYHNLSPEMRQCFAYCSLYPKDSRISKNKLIKSWMAQGYLKCSTEKQHMEDVGNQFVKMFLMDSFFQDAESNDYGEIILFKMHDLIHDLAMLVSGNDCCYLDSKAEKVEGRPMHVSLESEEAIHLLKSLDPSRLRTLILPYDLKEEEYLSVIAKFKYLRVLRMSSFPFYRLFDSIGKFKHLRYLDITDDYNLSGMPVGLGKLCWLQFLSIFVVGDSQETKYGTLNELKDLNLRGKLKIRDLDRVRDVALESHDVNLKEKKFLRSLTLDWSYEKIIGNSLQLLENLEPHHNLKQLTVHGYPGMRFSDWLSLLTNIVHISLSDLCNCGCLPPLERLPYLKSLKIDCCFELEYISLYEDGFAVTFFPSLDSLKLFDCPKLRGWRRRGDDISDSHNLSSSLSFPRLSQLQLYLCPQLTCMPTFPNVKDLRWRYSSAEALIGTLNTTRTALTCSAESSSSAAPLSMLRELGISADPMNLPKGWMQNLTSLESLEIERCDSETLEEFETGFKNDTNCLPSLRKISIYECERLKALPDWICNLSSLQHIRIYDCPNLALLPDGMRGLTDLKIFEVIYCSLLLKECQTKTVSRQIAHIPQIILRGD* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0226 1008 Gene3D - 158 322 IPR027417 -
Apr10g0226 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 426 IPR027417 -
Apr10g0226 1008 PANTHER OS05G0414200 PROTEIN 31 906 - -
Apr10g0226 1008 Pfam Rx N-terminal domain 13 94 IPR041118 -
Apr10g0226 1008 Gene3D - 412 501 IPR036388 -
Apr10g0226 1008 Gene3D - 326 411 IPR042197 -
Apr10g0226 1008 SUPERFAMILY RNI-like 809 983 - -
Apr10g0226 1008 Pfam NB-ARC domain 172 414 IPR002182 GO:0043531
Apr10g0226 1008 Gene3D Ribonuclease Inhibitor 846 1002 IPR032675 -
Apr10g0226 1008 Gene3D Ribonuclease Inhibitor 549 841 IPR032675 -
Apr10g0226 1008 Coils Coil 35 55 - -
Apr10g0226 1008 PANTHER DISEASE RESISTANCE PROTEIN RP 31 906 IPR044974 GO:0006952
Apr10g0226 1008 PRINTS Disease resistance protein signature 192 207 - -
Apr10g0226 1008 PRINTS Disease resistance protein signature 266 280 - -
Apr10g0226 1008 PRINTS Disease resistance protein signature 363 377 - -
Apr10g0226 1008 PRINTS Disease resistance protein signature 890 906 - -
Apr10g0226 1008 Gene3D - 8 114 - -
Apr10g0226 1008 SUPERFAMILY L domain-like 491 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0226 Apr-Chr10 5380528 5410015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0226 190 423 WRKY Transcription Factor Family AT5G45050 26.556 1.27e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0226 - - aprc:113850647 1441.79