Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0224 ATGGCTGAATCAATTCCATTTGCTGTTTCTTCAAATCTCATTCACAGGTTGGCTTCCGCAGATTTTCTTGAATTTGGACAGGAGTATGATGTGAAAAAAGAGTTGGATGAGCTTAAGAAGACAATTGAATCTATCAATGATGTCCTCCTTGATGCTGACCATAGACAAGAACAAGTTCGTGTGCGTAATTGGATATCTGACTTCAAAGAAGTACTCCATGCTACAGATGACTTCTTAGATGACCTTGCTATCGAATTTAGGAGAGACAAATTGGGTGCAGCCGAAGGAAAAGAAATAAACAGGGTACTTCGTTCCATTTCATCTTCAAATCAACTTCCTTTATACAATGAAATGCCTGGCAAAATTAAGGAAATACGAGAAAGTTTTAACGGTGTGGTAAAAGAAATGAAGGATTTGAATTTATACCCAAGATCTGTTGTGGTCAAGCAAACTGATAGTGGATGGAGGGAAACATGTTCTTTTGTGTTAGAGACAGATATCATTGGAAGAGATGATAATAAAATGGAGATTATTAATCTGTTGAGACAACCTCATGAAAACCATAAAGTTTCTGTGATTGCCATTGTTGGCATTGGTGGCTTGGGGAAGACAGCTCTTGCTCAATTAGTGTATAATCAACAGGAATTGCAGGAATTTTTTGAAATGCAAATGTGGGTGGGTGTCTCTGATGTATTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAATTACTGGTGACCAAGTTGAAGACAAGTTATCATTAGGCAACTTGCAAAGAAAACTTCATGAAAAAATAGGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACATGACAAATGGGCTGAATTGAGAAAGTATTTGATGTGTGGTGCCCAAGGTAGTAAGATTTTAGCGACAACTCGAAGTGAAAATGTAGCAAAGTCAATGACTACTAGCACTTCCTATCGTTTGAAAGGTTTGACGGATGAAGCATCGTGGAGTTTGTTAAAGAATATTGCATTTGAGGATGATTCCGAAGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGCAAAGGGGTTCCACTAGCAGTTAAAACGCTGGGAGGCCTGTTACGGGGACAAAAGGAAGAAAGGGAATGGGAGAATGTTTCACGTGGTGACTTCTGGAAATTATGCGAAGAGCAGGATAGTATTATGCCAATTCTAAAACTCAGTTACCGCAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTATATCCCAAGGATTCAGAAATTCCGAAGGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCAACCGAAAAACAGCACATGGAGGATGTTGGTATTCAATTTGTAAAGATGTTTTTGATGAACTCATTTTTTCAGGATGCAGAGAGTGATGAATACGGTGAGATCATTAGTTTCAAAATGCACGATTTAATGCATGATCTTGCAATGCTGGTAGCTGGCAATGATTATTGTTACTTGGATAGTAAGGCAGAAAAAGTTGAAGGTAGATCCATGCACGTGTCATTGGAATCTGATGTGAACATTAATGTGTTGAAATGGTTAGATCCGAGCAGGCTGCGAACTTTGATTTTCCTACCGTATCACTTCGAAAAGGAGGAATATTTGTCTGTTATTGCAAAGTTCAAATACTTGCGTGTCTTGAGGACGCATTGTCTCTCTGATTCCACTGAAAATTTGAAGCATTTAAGATACCTTGTTTTAACAGAAAATACAAGTCTTCCCAAATCTATGAGCAATCTTGTTTTCCTTCAAACATTAAAATTGAAAGATTGCGATGAAGAATCATTTTCAGAAGTAGTCACAAAGTTAGTCAATTTGAGGTGCCTTGATATTGCTTATTATGACACCGTGTGTGGGATGGCAGGGTTCGGAAAATTATCCTCATTGCAACTCTTATCGACCTTTGGTGTGGGAGACAACAGCCAAGAAATAAAACATGGCACACTAAATGAACTGAAGGACTTAAACCTCAGAGGCCGATTAGAAATTCAGCATCTCAATTGTGTCAGAGAAGTGGCTCTGGAATCTCAGGACATAAATTTGAAAAAAAAAAAATTCCTTCAATCCTTAACTCTGGACTGGTGGTATGGAGACCTCTGTAACAGTGACAGCTTGCAATTATTGGAAAACCTTCAACCCCACCGTAATCTTAAGCAATTGGAGGTGAATCATTATCCAGGCGTGCTTTTCCCAAATTGGATTTCTCTCCTCACGAATGTTGTTGACATCACTCTCTCTGCTTTTGATAATTGTCGCTGTCTCCCTCCGTTGGAACGTCTCCCGTCCCTGAAGTCACTTAACATACAGTTTCTTCGTGAATTGGAATACATAGATCTCTACGAGGATGGTTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAGCCTCACATTATTTCATTGTCCCAAGCTCAGGGGATGGCGGAGGCGGGGAGACGATATCAATGATTCACATAATCTCTCCTTACCTCTTTCATTTCCTCATCTTTCTCGACTGGAAGTCTCTAAATGTCCACAGTTGACTTGGATGCCTACTTTTCCAAACGTTAAGGATTTAATATGGTGTCACAGCAGTGCAGAGCCATTAATAGGAACACTAAACACAACAGCGTCAACATGTTCAGCTGACTCATCTTCCTCCGCTGCTCCTCTTTCCATGCTCAAACAATTGAGCTTATCTGATCCTATGAATTTAACAAAGGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTTCAAATTCAATGGTGTGACAGTGAAACACTTGGGGAATTTGAAACTTGGTTTAAGGACGACACCAACTGCCTTCCTTCTCTGCGACAATTTTCATTATATTATTGTCAATGGCTAGAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGGAGATCACAATCTCATTGTGCCCAAAATTGGCATCGCTGCCCGAAGGAATGAGTAGTCTTACCAACTTAAAGATCTTTGAGGTCTGGGAGTGTTCCCTCTTACTTGAAGAATGTCTAACAGAGACAAGTGCTGTTAGTCGCCAAATCGCACACATCCCACATATTATCCTTAGCGATTAG 3144 0.396 MAESIPFAVSSNLIHRLASADFLEFGQEYDVKKELDELKKTIESINDVLLDADHRQEQVRVRNWISDFKEVLHATDDFLDDLAIEFRRDKLGAAEGKEINRVLRSISSSNQLPLYNEMPGKIKEIRESFNGVVKEMKDLNLYPRSVVVKQTDSGWRETCSFVLETDIIGRDDNKMEIINLLRQPHENHKVSVIAIVGIGGLGKTALAQLVYNQQELQEFFEMQMWVGVSDVFDVKTILKKILESITGDQVEDKLSLGNLQRKLHEKIGGKKYLLVLDDIWNERHDKWAELRKYLMCGAQGSKILATTRSENVAKSMTTSTSYRLKGLTDEASWSLLKNIAFEDDSEGVNQNLESMGKEIAKKCKGVPLAVKTLGGLLRGQKEEREWENVSRGDFWKLCEEQDSIMPILKLSYRNLSPEMRQCFAYCSLYPKDSEIPKDELIQLWMAQGYLKCSTEKQHMEDVGIQFVKMFLMNSFFQDAESDEYGEIISFKMHDLMHDLAMLVAGNDYCYLDSKAEKVEGRSMHVSLESDVNINVLKWLDPSRLRTLIFLPYHFEKEEYLSVIAKFKYLRVLRTHCLSDSTENLKHLRYLVLTENTSLPKSMSNLVFLQTLKLKDCDEESFSEVVTKLVNLRCLDIAYYDTVCGMAGFGKLSSLQLLSTFGVGDNSQEIKHGTLNELKDLNLRGRLEIQHLNCVREVALESQDINLKKKKFLQSLTLDWWYGDLCNSDSLQLLENLQPHRNLKQLEVNHYPGVLFPNWISLLTNVVDITLSAFDNCRCLPPLERLPSLKSLNIQFLRELEYIDLYEDGFAVTFFPSLESLTLFHCPKLRGWRRRGDDINDSHNLSLPLSFPHLSRLEVSKCPQLTWMPTFPNVKDLIWCHSSAEPLIGTLNTTASTCSADSSSSAAPLSMLKQLSLSDPMNLTKGWMQNLTSLESLQIQWCDSETLGEFETWFKDDTNCLPSLRQFSLYYCQWLEALPDWICNLSSLQEITISLCPKLASLPEGMSSLTNLKIFEVWECSLLLEECLTETSAVSRQIAHIPHIILSD* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0224 1047 PANTHER OS05G0414200 PROTEIN 31 944 - -
Apr10g0224 1047 Pfam NB-ARC domain 172 413 IPR002182 GO:0043531
Apr10g0224 1047 Pfam Rx N-terminal domain 13 97 IPR041118 -
Apr10g0224 1047 Gene3D Ribonuclease Inhibitor 530 879 IPR032675 -
Apr10g0224 1047 Gene3D Ribonuclease Inhibitor 880 1039 IPR032675 -
Apr10g0224 1047 PRINTS Disease resistance protein signature 192 207 - -
Apr10g0224 1047 PRINTS Disease resistance protein signature 266 280 - -
Apr10g0224 1047 PRINTS Disease resistance protein signature 363 377 - -
Apr10g0224 1047 PRINTS Disease resistance protein signature 582 598 - -
Apr10g0224 1047 Gene3D - 157 322 IPR027417 -
Apr10g0224 1047 SUPERFAMILY RNI-like 905 1022 - -
Apr10g0224 1047 Coils Coil 35 55 - -
Apr10g0224 1047 Gene3D - 412 501 IPR036388 -
Apr10g0224 1047 Gene3D - 8 114 - -
Apr10g0224 1047 PANTHER DISEASE RESISTANCE PROTEIN RP 31 944 IPR044974 GO:0006952
Apr10g0224 1047 SUPERFAMILY L domain-like 491 876 - -
Apr10g0224 1047 Gene3D - 326 411 IPR042197 -
Apr10g0224 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 426 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0224 Apr-Chr10 5253026 5271981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0224 190 450 WRKY Transcription Factor Family AT5G45050 25.373 3.29e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0224 - - aprc:113850108 1477.61