Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0223 ATGGCTGAACCAATTCCATTCGCTGTTACTTCAAATCTCATTCACAGGTTGGCCTCTGCAGATTTTATTGAATTTGGAGAAGAGTATGATGTGAAGGAAGATTTGGAAGAGCTTAAGAAGACAATTGAATCTATCAATGATGTGCTCCTTGATGCTGACCACAAACAAGATCAAGTTCGCGTGCGTAATTGGATAATGCACTTCAAGGAAGTACTTCATTGCGCAGATGACTTGTTGGATGACCTTGCTATCGAATTTATGCGACACAAATTGGATGTAGGACATGGAAAACAAGTAAACAAGGTACTTTATTCCTTTTCATCTTCAAATCGAATTGATTTTCCCATTCAAATGGCTGAAGAAATTAGAAGAACACAAGAAAGTTTTGATGCTGTGGTAAGAGGCATGTATAATTTGAATCTATGTCCAAGATCTATAGTGGTCAAGCAAACTGACATTGGATGGAGGGAAACATGTTCTTTTACGTTAGAATCTGATATCATTGGAAGAGATGACAGTAAAAAGGAGATTATTAGTCTGTTGAGACAACCTCATGAAAACCAAAAAGCTTCCGTGATTGCCATCGTTGGCCTCGGTGGCTTGGGGAAGACAACTCTTGCTCAATTGGTGTATAATGACTTGGAAGTGCAGATTTTATTTGAAATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAATTACGGGCGACCAAGTTGAAGTATCATTAGGCAACTTGCAAAGAAAACTTCATGAAAAAATAAGTGGTAAGAAATATTTGTTGGTACTGGATGACATTTGGAATGAGAGACATGACAAATGGGTTGAATTGAGAAAGTACTTGATGTGTGGCGCTCAAGACAGTAAGATTTTAGTGACTACTCGAAGTGAAAATGTAGCAAAGGCAATGACTGCCAGCGTTTCCTATTCCTTAAAAGGTTTGACTGATGGAGAATCTTGGTGTTTATTGAAGAATATTGCATTTGAAGATGATTCCAAAGGAGTGAATCAATATCTAGAATCAATGGGCAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTGGCAGTTAAAACCTTGGGAGGCCTGTTACGAGGACAAAACGAAGAAAGTGATTGGGAGAATGTTTTACGTGGTGACTTCTGGAAATTATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCGCAACTTGTCGCCCGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTATCCCAAGGATTCAAGAATTTCAAAGAATGTGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCAGTCGAAAAACAGCACATGGAGGATGTCGGTATTCAATTTGTAAAGATGTTTTTGATGAACTCATTTTTTCAAGATGCAGAAAATGACGAATACGGTGAGATCATTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTATTGTTACTTGAATAGTAAGGCAAAAAAAGTTGAAGGTAGACCCATGCACGTGTCATTGGAATCTGATGAGACCATTCATTTGTTGAAATCATTAGATCAGAGCAGGCTGCGAACTTTGATTTTGCCGTATTACTTCGAAGAGGAGGGATATTTGTCCGTTATTGCAAAGTTCAAATACTTACGTGTCTTGAGGATGCATCATCTCTCTGATTCCACTGAACATTTGAAGCATTCTTACCTTGATTTAACGCAACAAACAAGTCTTCCCAAATCCATGAGCAATCTTGTTTTCCTACAAACATTAAAATTGAAGAAGTGCGATGAAGAATCATTTTCAGTTGGGTTGGGAAAATTATGCTCTTTGCAATTCTTATCGACCTTTGTTGTGGGAGACCGTCAAGAGATAAAATATGCCACGTTAAATGAACTGAAGGACTTAAACCTAATAAGAGGCAAATTAAAAATTCAGTGTCTCAATCGTGTCAGAGAAGTGGCTCTGGAATCTCAGGACGTAAACTTAAAAGAAAAAATTTTCCTTCGATCCTTGATTCTAGATTGGCGTGCTTTTCCCAAATTGGCTCTCTCTCTCCTCACAAATGTTGTTCACATCCGTCTCTATAAGCTTCTTAATTGTGGCTGTCTCCCTCCGTTGGAACGTCTCCCGTCCCTGGAGTCACTTGTGATACAGTATCCCTGTGAATTGGAATACATATATCTCTACGAAGATGGTTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAGACTCTCATTATTTGGTTGTCCCAAGCTCAGGGGATGGCGGAAGCGGGGAGATGATATCAATGATTCACATAATCTCTCCTCGTCTCTTTCATTTCCTCGTCTTTCTCGTCTAAATGTCACTGACTGTCCACAGTTGACTTGGATGCCTACTTTTCCGAACGTTGAGTATTTAGAATGGTTTCGTAGCAGTGTGGAGCCATTAACAGCAACACTAAACTCAACATGTTCAGCCGACTCATCTTTCTCCGCTGCTCCTCTTTCCATGCTCAAAAAATTGACAATGTCTGATCCTATGAATTTACCTAAAGGTTGGATGCAAAATCTGATTTCTCTCCAGTGTCTTCAAATTCAATGGTATGACAGCGAAACACTCAATGAATTTGAAACTGGGTTTAAGGACGACACCAACTGCCTTCCTTCTCTGCGACAAATCAGCATAATTAGGTGTGAAAGGCTAGAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGCACATGGAGATCTCACTCTGCCCAAAATTGGCATCGCTCTCCGAAGGAATGAGTGGTCTTACCAACTTAAAGATCATTGAGGTTGATAATTGTTCCCTCTTAAGTAAAGAGTGTCGAATAGAGACAAGTGCTGTTAGTCGCCAAATCTCACACATTCCACAAATAATCCTTCGTGATTACTGA 2961 0.3921 MAEPIPFAVTSNLIHRLASADFIEFGEEYDVKEDLEELKKTIESINDVLLDADHKQDQVRVRNWIMHFKEVLHCADDLLDDLAIEFMRHKLDVGHGKQVNKVLYSFSSSNRIDFPIQMAEEIRRTQESFDAVVRGMYNLNLCPRSIVVKQTDIGWRETCSFTLESDIIGRDDSKKEIISLLRQPHENQKASVIAIVGLGGLGKTTLAQLVYNDLEVQILFEMQMWVCVSDNFDVKTILKKILESITGDQVEVSLGNLQRKLHEKISGKKYLLVLDDIWNERHDKWVELRKYLMCGAQDSKILVTTRSENVAKAMTASVSYSLKGLTDGESWCLLKNIAFEDDSKGVNQYLESMGKEIAKKCKGVPLAVKTLGGLLRGQNEESDWENVLRGDFWKLCEEQDSIMPILKLSYRNLSPEMRQCFAYCSLYPKDSRISKNVLIQLWMAQGYLKCSVEKQHMEDVGIQFVKMFLMNSFFQDAENDEYGEIISFKMHDLMHDLAMLVAGNDYCYLNSKAKKVEGRPMHVSLESDETIHLLKSLDQSRLRTLILPYYFEEEGYLSVIAKFKYLRVLRMHHLSDSTEHLKHSYLDLTQQTSLPKSMSNLVFLQTLKLKKCDEESFSVGLGKLCSLQFLSTFVVGDRQEIKYATLNELKDLNLIRGKLKIQCLNRVREVALESQDVNLKEKIFLRSLILDWRAFPKLALSLLTNVVHIRLYKLLNCGCLPPLERLPSLESLVIQYPCELEYIYLYEDGFAVTFFPSLERLSLFGCPKLRGWRKRGDDINDSHNLSSSLSFPRLSRLNVTDCPQLTWMPTFPNVEYLEWFRSSVEPLTATLNSTCSADSSFSAAPLSMLKKLTMSDPMNLPKGWMQNLISLQCLQIQWYDSETLNEFETGFKDDTNCLPSLRQISIIRCERLEALPDWICNLSSLQHMEISLCPKLASLSEGMSGLTNLKIIEVDNCSLLSKECRIETSAVSRQISHIPQIILRDY* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0223 986 PRINTS Disease resistance protein signature 192 207 - -
Apr10g0223 986 PRINTS Disease resistance protein signature 264 278 - -
Apr10g0223 986 PRINTS Disease resistance protein signature 361 375 - -
Apr10g0223 986 PRINTS Disease resistance protein signature 944 960 - -
Apr10g0223 986 Gene3D - 10 122 - -
Apr10g0223 986 Pfam Rx N-terminal domain 12 97 IPR041118 -
Apr10g0223 986 Gene3D Ribonuclease Inhibitor 524 773 IPR032675 -
Apr10g0223 986 Gene3D Ribonuclease Inhibitor 779 977 IPR032675 -
Apr10g0223 986 Pfam NB-ARC domain 171 411 IPR002182 GO:0043531
Apr10g0223 986 PANTHER OS05G0414200 PROTEIN 32 940 - -
Apr10g0223 986 Gene3D - 410 499 IPR036388 -
Apr10g0223 986 SUPERFAMILY L domain-like 474 833 - -
Apr10g0223 986 PANTHER DISEASE RESISTANCE PROTEIN RP 32 940 IPR044974 GO:0006952
Apr10g0223 986 SUPERFAMILY RNI-like 786 961 - -
Apr10g0223 986 Gene3D - 324 409 IPR042197 -
Apr10g0223 986 Coils Coil 35 55 - -
Apr10g0223 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 424 IPR027417 -
Apr10g0223 986 Gene3D - 157 320 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0223 Apr-Chr10 5191069 5199073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0223 193 421 WRKY Transcription Factor Family AT5G45050 26.639 6.50e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0223 - - aprc:113850108 1424.07