Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0220 ATGGACTTCAAAGAAGTACTTCATTGCGCAGATGACTTGTTGGATGACCTTGCTATCGAATTTATGCGACACAAATTGGATGAAGGACATGGAAAACAAGAAAACAAGGTACTTTATTCCTTTTCATCTTCAAATCGAATTGATTTTCCCATTCAAATGGCCGAAGAAATTAAAAAGACACGAGAAAGTTTTGATGCTGTTGTAAAAGGCATGTATAAATTGAATTTATGCCCAAGATCGGTTGTAGTCAAGCAAACTGACAGTGGATGGAGGGAAACGTGTTCTTTTGTGTTAGAGACAGATATCATTGGAAGAGATGATAGTAAAAAGGAGATTATTAGTCTGTTGAGACAACCTCATGAAAACCAACAAGCTTCTGTGATTGCCATTGTTGGCCTTGGTGGTTTGGGGAAGACAGCTCTTGCACAATTGGTGTATAATGACTTGGAAGTGCAGAATTTTTTTGAAATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGAAGTGAAAACTATTCTGAAGAAAATATTAGAATCAATTACCGGCGACCAAGTTGAATTATCATTGGGCAACTTGCAAAGAAAACTTAATGAAAAGATGAGTGGCAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACGTGACAAATGGATTGAATTGAGAAAGTACTTGATGTGTGGCGCTGAAGATAGTAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCTAAGGCAATGACAGCTAGCACTTCCTATCCTTTGAAAGGTTTGAGTGATGAAGCATCTTGGACTTTGTTGAAGAGCATTGCATTTGAGGATGATTTCAAAGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTGGCAGTTAAAACCGTGGGAGGCCTTTTACGAGGACAAAACGAAGAAAGTGTATGGGAGAATGTTTCACGCGGTGACTTCTGGAAATTATGTGAAGAGCAAGATAGTATTATGCCAATTCTAAAACTCAGTTACAGCAACTTGTCACCAGAAATGAGACAATGTTTTGCTTATTGCTCCTTGTACCCCAAGGATTGGATTATTCGAAAGGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCAACTGAAAAACAGCAGATGGAGGATGTCGGTAATCAATTTGTAAAGATGTTTTTTATGAACTCATTTTTTCAAGATGCAGAAAGTAATGACCATGGTGAGATCATTTGTTTCAAAATGCATGATTTAATTCATGATCTTGCAATGCTTGTTTCTGGCAATGATTGCTGTTACTTGGATAGTAAGGCAGAAAAAGTTGAAGGTAGACCCATGCACGTATCATTGGAATCTTATGAGACCATTCATTTGTTGAAATCATTAGATCCGAGCAGGCTGCGAACTTTGATTTTGCCTTTGGTTTTGCCGTATTACTGGGAAGAAGAGGAATATTTGTCTGTTATTGCAAAGTTCAAATACTTACTTGTCTTGAGGACGCCTCATCTCTCTGATTCCACCGAACATTTGAAGCATTTAAGATACCTTGATTTAACGCAGCAAACAAGTCTTCCCAAATCCATGAGCAATCTTGTTTTCCTACAAACATTAAAATTGTGCGATTGTGATGAAGAATCATTTTCAGAAGTAGTCACAAAATTAGTCAACTTGAGGTGCCTTGATATTGCTGGTTATCGCTCCATGATGAGTGGGATGGCAGTTGGGTTGGGAAAATTATGCTCTTTGCAATTCTTATCGACGTTTCTTGTGGGAGACAGCCAAGAAATAAAATATGGCACACTAAATGAACTGAAGAACTTAAACCTAAGAGGAGAATTAAAGATTAAGCATCTCGATCGGGTCAGAGACGTGGCTCTGGAATCACAGCACGTAAATTTAAAAGAAAAAAAATTCCTTCAATCCCTGACTCTGAGATGGTCCATTGAAGAGCACAGAGACATCCGTAACAGTGACAGTGACAGCTTACAATTGTTGGAAAACCTTCAACCCCACCGTAATCTTAAGCATTTGGAGGTGTTTTATTATCCAGGGGTGCTTTTCCCAAATTGGCTTTCTCTCCTCACAAATGTTGTTAACATCACTCTCTTTGGGTTTGTTAGTTGTCGGTGTCTCCCACCGTTGGAACTTCTCCCATCCCTGAAGTCACTTGTTCTGCGGTATCTTTATGAATTGGAATACATATATCTCTACAAAGATGGTTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAGCCTCACATTATTTCATTGTCCCAAGCTCAGGGGATGGCGGAGGCGGGGAGATGATATAAATGATTCACATAATCTCTCTTTACCTCTTTCATTTCCTCCTCTTTCTCTACTAATTGTCTCTGAATGTCCACAGTTGACTTGCATGCCTACTTTTCCAAACGTTAAGGATTTAAAATGGCTTCATAGCAGTGCGGAGCCATTAACAGGAACACTAAATTCAACATGTTCAGTTGACTCATCTTCCTCCGCTGCTCCTCTTTCCATGCTCAAAAAATTGACGATTTCTGATCCTATGAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTCTCAAGTCTCTTCGAGTTGGATGGTATAAAACTGAAACACTCGAGGAATTTGGAACTGGGTTTAAGGACGACACCGACTGCCTTATTTCTCTGCGGAAAATTTCATTATATGATTGTGAAAACCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGCATATCAAAATCTCATACTGCCCAAAATTGGCATCGCTGCCCGAAGGAATGAGTGGTCTTCCTAACTTAAAGATCTTTGAGGTTGGATGCAAAATCTGA 2880 0.3913 MDFKEVLHCADDLLDDLAIEFMRHKLDEGHGKQENKVLYSFSSSNRIDFPIQMAEEIKKTRESFDAVVKGMYKLNLCPRSVVVKQTDSGWRETCSFVLETDIIGRDDSKKEIISLLRQPHENQQASVIAIVGLGGLGKTALAQLVYNDLEVQNFFEMQMWVCVSDNFEVKTILKKILESITGDQVELSLGNLQRKLNEKMSGKKYLLVLDDIWNERRDKWIELRKYLMCGAEDSKILVTTRSENVAKAMTASTSYPLKGLSDEASWTLLKSIAFEDDFKGVNQNLESMGKEIAKKCKGVPLAVKTVGGLLRGQNEESVWENVSRGDFWKLCEEQDSIMPILKLSYSNLSPEMRQCFAYCSLYPKDWIIRKDELIQLWMAQGYLKCSTEKQQMEDVGNQFVKMFFMNSFFQDAESNDHGEIICFKMHDLIHDLAMLVSGNDCCYLDSKAEKVEGRPMHVSLESYETIHLLKSLDPSRLRTLILPLVLPYYWEEEEYLSVIAKFKYLLVLRTPHLSDSTEHLKHLRYLDLTQQTSLPKSMSNLVFLQTLKLCDCDEESFSEVVTKLVNLRCLDIAGYRSMMSGMAVGLGKLCSLQFLSTFLVGDSQEIKYGTLNELKNLNLRGELKIKHLDRVRDVALESQHVNLKEKKFLQSLTLRWSIEEHRDIRNSDSDSLQLLENLQPHRNLKHLEVFYYPGVLFPNWLSLLTNVVNITLFGFVSCRCLPPLELLPSLKSLVLRYLYELEYIYLYKDGFAVTFFPSLESLTLFHCPKLRGWRRRGDDINDSHNLSLPLSFPPLSLLIVSECPQLTCMPTFPNVKDLKWLHSSAEPLTGTLNSTCSVDSSSSAAPLSMLKKLTISDPMNLPKGWMQNLTSLKSLRVGWYKTETLEEFGTGFKDDTDCLISLRKISLYDCENLKALPDWICNLSSLQHIKISYCPKLASLPEGMSGLPNLKIFEVGCKI* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0220 959 Gene3D - 259 344 IPR042197 -
Apr10g0220 959 Gene3D Ribonuclease Inhibitor 815 958 IPR032675 -
Apr10g0220 959 Gene3D Ribonuclease Inhibitor 607 814 IPR032675 -
Apr10g0220 959 PANTHER DISEASE RESISTANCE PROTEIN RP 10 940 IPR044974 GO:0006952
Apr10g0220 959 Pfam NB-ARC domain 106 347 IPR002182 GO:0043531
Apr10g0220 959 CDD AAA 111 219 - -
Apr10g0220 959 SUPERFAMILY L domain-like 424 833 - -
Apr10g0220 959 SUPERFAMILY RNI-like 756 954 - -
Apr10g0220 959 Gene3D Ribonuclease Inhibitor 486 597 IPR032675 -
Apr10g0220 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 359 IPR027417 -
Apr10g0220 959 Gene3D - 92 255 IPR027417 -
Apr10g0220 959 PANTHER OS05G0414200 PROTEIN 10 940 - -
Apr10g0220 959 Gene3D - 345 434 IPR036388 -
Apr10g0220 959 PRINTS Disease resistance protein signature 127 142 - -
Apr10g0220 959 PRINTS Disease resistance protein signature 199 213 - -
Apr10g0220 959 PRINTS Disease resistance protein signature 296 310 - -
Apr10g0220 959 PRINTS Disease resistance protein signature 518 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0220 Apr-Chr10 5082412 5095165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0220 128 356 WRKY Transcription Factor Family AT5G45050 26.230 3.44e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0220 - - aprc:113850108 1387.09