Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0215 ATGGCTAATGTAGACAACTATATTGGGCTCATAGATGATAGTAAAAAGGAGATTATTAGTCTGTTGAGACAACCTCATGAAAACCAAAAAGTTTCCGTTATTGCCATTGTTGGCCTTGGTGGTTTGGGGAAGACAGCTCTTGCACAAGTGGTGTATAGTGACTGGGAAGTGCAGACTTTTTTTGATATGCAGATATGGGTGTGTGTCTCTGATAACTTTGACGTTAAAACTGTTCTGAAGAAAATATTAGAATCAATTACTGATTTCCAAAGACAAGAACAATCATTAGAGAAGTTGCAAAAAGAGCTTCGTAACAGATTAAGTGGTAAGAAATATTTGTTGGTACTGGATGACATTTGGAATGAGAGACATGACAAATGGGCTGAATTGAGAAAGTACCTGATGTGTGGCGCTCAAGATAGTAAGATCTTAGTGACAACTCGAAGTGAAAATGTAGCAAAGGCAATGATTGCTAGCACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGCATCTTGGAGTTTGTTGAAGAACATTGCATTTGATGATGATTCCAAAGGAGTGAATCAAAATCTAGAATCAGTGGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTGGCAGTTAAAACCCTGGGAGGTCTGTTACGAGGACAAAACGAAGAAAGTGAATGGGAGAATGTTTTACCCGGTGACTTTTGGAAATTATGTGAAGAGCAAGATAGTATTATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTAATTGCGCTTTGTACCCCAAGGATTCAGAAATTGCGAAGGATCAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTACATGTTCAACCGAAAAACAGCACATGGAGGATGTTGGTATTCAATTTGTAAAGATGTTTTTGATGAACTCATTTTTCCAAGATGCAACAAGTGATGTATACGGTGAGATCATTAGTTTTAAGATGCATGATTTAATGCATGATCTTGCAATGCTAGTAGCTGGCAATGATTATTGTTACTTGGATGGTAAGGCAGAAAAAGTTGAAGGTAGACCCATGCATGTATCATTGGAATACGATGCCATTCATTTGCTGAAATCATTAGATCCGAGCAGGCTGCGAACTTTGATTTTTCCTTTGATTTTGCCGTATTTCTTAAATAAGGAGAAATATTTGTCGGTTTTAAAGTCGAAATGCTTACGCGTCTTGAGAATGCATTATCTCTCTGATTCCACTGAACATTGGAAGCATTCAAGATACCTTGCTTTAACGCAACAAACAAGTCTTCCCAAATCCATGAGCAATCTTGTTTTCCTACAAACATTAAAATTGAAGTGCGACGACGAAGGATTATTTTCAGAAGTACTCACAAAATTGAGGTGCCTTGATGTCGCTCATTATCACTCCATGATGAGTGGGGTGGTAGGTGCATTGGGAAAATTATCCTCATTGCAATTCTTATGGACCTTTGTTGTGGGAGACAACCAAGAAATAAAATATGGCACACTAAATGAACTGAAGGATTTGAACCTAATAAGAGGCAAATTAGAAATTAAGCATCTCAGTCGTGTCGGAGAAGTGGCTCTGGAATCTCAGGACGTAAATTTAAAAGAAAAAAAATTCCTTCAATCCTTAGCTCTGGATTGGTCGCATGGAGACATCCGTAACAGTGACAGCTTGCAATTATTGGAAAACCTTCAACCCCACCATAATCTCAAGCATTTGGAGGTGAATAATTATCCAGGCGTGCTTTTCCCAAATTGGCTTACTCTCCTCACAAATGTTGTTGAGATCTCTCTGCATGATCTTTATGATTCTGCAGTAACCTTCTTCCCCTCTTTGGAGAGCCTCGCATTTTCTCTGTCCCAGGCTCAGAGGATGTTGACTTGCATGCCTACTTTTCCAAATGTTAAGAGTCTAGAATGGTTTTACAGCAGTGCGGAGCCATTAATAGCAACACTAAACTCAACATGTTCAGCTGACTCATCTTCCTCTGCTGCTCCTCTTTGCATGCTCAAACAATTGACGATTTTTGAACCTATGAATTTACCAAAGGGTATGATGCAAAATCTGACTTCTCTCGAGTCTCTTCAAATAGAATCCTTTGAAATTGAAACACTTGAGGAATTTGAAATTGGGTTTAAGGACGACACCAACTGCCTTCCTTCTCTGCAAAAAATCAGCATACATGGATGTGAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGCACATCGTGATCTTCTATTGCCCAAAATTGGCATCGCTGCCCGAGGGAATAAGTGGTCTTACCAATTTAAAGATCTTAGAGGTCTACGAGTGTTCCCTCTTACTAAAGAGTGCCGAACAGAGACAAGTGCTGTTAGTCGCCAAATCGCACACATCCCACGAATAA 2442 0.3952 MANVDNYIGLIDDSKKEIISLLRQPHENQKVSVIAIVGLGGLGKTALAQVVYSDWEVQTFFDMQIWVCVSDNFDVKTVLKKILESITDFQRQEQSLEKLQKELRNRLSGKKYLLVLDDIWNERHDKWAELRKYLMCGAQDSKILVTTRSENVAKAMIASTSYPLKGLTDEASWSLLKNIAFDDDSKGVNQNLESVGKEIAKKCKGVPLAVKTLGGLLRGQNEESEWENVLPGDFWKLCEEQDSIMPILKLSYHNLSPEMRQCFANCALYPKDSEIAKDQLIQLWMAQGYLTCSTEKQHMEDVGIQFVKMFLMNSFFQDATSDVYGEIISFKMHDLMHDLAMLVAGNDYCYLDGKAEKVEGRPMHVSLEYDAIHLLKSLDPSRLRTLIFPLILPYFLNKEKYLSVLKSKCLRVLRMHYLSDSTEHWKHSRYLALTQQTSLPKSMSNLVFLQTLKLKCDDEGLFSEVLTKLRCLDVAHYHSMMSGVVGALGKLSSLQFLWTFVVGDNQEIKYGTLNELKDLNLIRGKLEIKHLSRVGEVALESQDVNLKEKKFLQSLALDWSHGDIRNSDSLQLLENLQPHHNLKHLEVNNYPGVLFPNWLTLLTNVVEISLHDLYDSAVTFFPSLESLAFSLSQAQRMLTCMPTFPNVKSLEWFYSSAEPLIATLNSTCSADSSSSAAPLCMLKQLTIFEPMNLPKGMMQNLTSLESLQIESFEIETLEEFEIGFKDDTNCLPSLQKISIHGCERLKALPDWICNLSSLQHIVIFYCPKLASLPEGISGLTNLKILEVYECSLLLKSAEQRQVLLVAKSHTSHE* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0215 813 Gene3D - 166 251 IPR042197 -
Apr10g0215 813 PRINTS Disease resistance protein signature 33 48 - -
Apr10g0215 813 PRINTS Disease resistance protein signature 106 120 - -
Apr10g0215 813 PRINTS Disease resistance protein signature 203 217 - -
Apr10g0215 813 PRINTS Disease resistance protein signature 777 793 - -
Apr10g0215 813 Gene3D - 252 341 IPR036388 -
Apr10g0215 813 Gene3D Ribonuclease Inhibitor 375 683 IPR032675 -
Apr10g0215 813 Gene3D Ribonuclease Inhibitor 684 796 IPR032675 -
Apr10g0215 813 Gene3D - 2 160 IPR027417 -
Apr10g0215 813 SUPERFAMILY L domain-like 316 793 - -
Apr10g0215 813 PANTHER DISEASE RESISTANCE PROTEIN RP 12 747 IPR044974 GO:0006952
Apr10g0215 813 Coils Coil 82 106 - -
Apr10g0215 813 Pfam NB-ARC domain 13 254 IPR002182 GO:0043531
Apr10g0215 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 266 IPR027417 -
Apr10g0215 813 PANTHER OS05G0414200 PROTEIN 12 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0215 Apr-Chr10 5013914 5017806 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0215 31 290 WRKY Transcription Factor Family AT5G45050 26.394 4.76e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0215 - - aprc:113850638 1602.8