Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0211 ATGAGTGGCCTAATTTACGTATCAACCCTTCTTCATCGTTCTCTTAAACTCATGGCTAAGTTTGAGTCAGTGCCATTTGCTGTTTCATCAAATCTTGTTCACAGGCTAGCTTCCCCAGATTTTCTTGAATTTGGACAGCAGTATGGTGTGATGGATGAGTTGGAAGCGCTTATGAAGACAATTGGATCTATCAATGATGAGCTCCTTGATGCTGACCACAAACAAGATCAAGTTCGCGTGCGTAATTGGATATCTGACTTCAGAGAAGTACTCCATGCTGCAGATGACTTCTTAGATGACCTTGCTATCGAGTTTAGGAGAGACAAACGGGATGCAGCAGAAGGAAAAGAAGCAAACAAGGTACTTCTTTCCATTTCATCTTCAAATCAATTTCCTTTGTACAGTGAAATGTCTGACAAAATTAAAGAAATACAAAAAAGTTTTAACGATGTAGTAGAAGACATGGATAAATTGAATTTAAGCCCAAGTTCTGTGCTGGTTAAGCAAACTAACAGTGAATGGAGGGAAACATGTTCTTTCGTGTTAGAATCTGATATCATTGGGAGAGATGATAGTAAAAGGGAGATTATTAGTCTGTTGAGACATCCGAATGAAAACCAAAAAGTTTCTGTGATTGCCATCCTTGGCCTCGGTGGCTTGGGTAAGACAACTCTTGCTCAGTTGGTGTATAATGACTTGGAAGTGCAGAATTTATTTGAAATGCGAATGTGGGTGTGTGTATCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAATCACGGGCGACCAAGTTGAACTATCATTAGGCAACTTGCAAAGAAAACTTCATGAAAAAATAAGTGGTAAGAAATATTTGTTGGTACTGGATGACATTTGGAATGAGAAACATGACAAATGGGTTGAATTGAGAAAGTACTTGATGTGTGGCGCTCAAGACAGCAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAAGGCAACGTCTGCTAGCACTTCCTATCCTTTAGAAGGTTTGACTGATGAAGAATCTTGGAGTTTGTTGAAGAGCGTTGCATTTGAGGACGATTTCAAAGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCATTGGCAGTTAAAACCTTGGGAGGCCTGTTACGAGGACAAAACGAAGAAAGTGATTGGGAGAATGTTTTACATGGTGACTTCTGGAAATTATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTACTGCTCTTTATACCCCAAGGATTCAAAAATTCAAAAGGATAGGTTGATTCAGTTATGGATGGCACAGGGTTACCTTATATGTTCAACTGAAAAACAGCAGATGGAAGATGTCGGTAATCAATTTGTAAAGATGTTTTTGGTGAACTCATTTTTTCAAGATGCGGATAGTGAATACGGTGAGATCATTAGCTTCAAAATGCATGATTTAATGCATGATCTGGCAATGCTAGTAGCCGGCGGTGATTATTGTTATTTGGATAGTAAGGCAGAAAAAGTTGAAGGTAGACCCATGCACGTATCATTGGAATCTTGTGAGGCCATTCATTTGTTGAAATCATTAGATCCGACCAGACTGCGAACTTTGATTTTGCCGTATGAATTGAAAGAGGAGGAATATTTGTCGGTTATTGCAAAGTTCAAATACTTACGTGTCTTGAGGATGTCATCTTTTTCCTTCTACAGATTGTCCGATTCAATTGGAGAATTGAAGCATTTAAGATATCTTGACATCATTGATTATGGCTTCTTGAGTGGGATGCCAGTTGGGTTGGGAAAGTTGTGCTGGTTGCAATTCTTATCAATCTTTGTTGTGGGAGACAGCCAAGAAACAAGATATGGCACATTAAATGAATTGAAAGACTTAAACCTGAGAGGAGAATTAAAAATTCAGTATCTCGATCGTGTCAGAGACGTGGCTCTGGAATCACATGATGTAAATTTAAAAGAAAAAAGATTCCTTCAATCCTTGATTTTGATTTGGTCGCATAGAGACATCCGTAAGAGTGACAGTTTAAAATTATTAGAAAACCTTGAGCCCCACCGTACTCTTAAGCAATTGGAGGTGGGTGGTTATCCAGGCATGCGTTTCCCAGATTGGCTTTCTCTCCTCACAAATGTTGTTGAAATTAGTCTCTTTTGTCTTCGTAATTGTGGCTGTCTCCCACCGTTGGAACGTCTCCCGTCCCTGAAGTCACTTCTGATGGACTCTCTTTATGAATTGGAATACATATATCTCTACGAAGATGGTGCAGTAACCTTCTTCCCCTCTTTGGAGAGCCTCTTCTTAAGAGGTTGTCCCAAGCTCAGGGGATGGCGGAGGCGGGGAGATGATATCAATGATTCACATAATCTCTCCTCTTCTCTTTCATTTCCTCATCTTTCTCAACTAAATGTTTCAGACTGTCCACTGTTGACTTGCATGCCAACTTTTCCAAACGCTAAGGATTTAGGATGGCTTAAATGCAGTGCAGAACCATTAATAGGAACACTGAACACAACAGAGTCAACACGTTCAGCTGACTCATCTTCCTCTGCTGCTCCTCTTTCCATGCTCAAAGAATTGGCGATTTCTGATCATATAAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTGTCGAGTCTCTTGAAATTATACGGTGTGAAAGTGAAACACTTGAGGAATTTGAAGCTGGGTTTAAGCTTGACACCAACTGCCTTCCTCCTCTGCGAAAAATCAGCATACGTGGGTGTGAAAACCTAAAGGCTCTGCCAGATTGGATTTGCAACCTCTCGTCGCTTCAACACATCATATTGTGGAATTGCCCAAAACTGGCATCGCTGCCCGAAGGAATGAGTGGTCTTACCAACTTAAAGATCTTTGAGGTTGAGTGCTGTGTCCTCTTAGTTAAAGAATGCCGAACAGAGACAAGTGTTGTTAGTCGCCAAATCGCACACATCCCACAAATAATTCTTCATGATTAA 3069 0.3985 MSGLIYVSTLLHRSLKLMAKFESVPFAVSSNLVHRLASPDFLEFGQQYGVMDELEALMKTIGSINDELLDADHKQDQVRVRNWISDFREVLHAADDFLDDLAIEFRRDKRDAAEGKEANKVLLSISSSNQFPLYSEMSDKIKEIQKSFNDVVEDMDKLNLSPSSVLVKQTNSEWRETCSFVLESDIIGRDDSKREIISLLRHPNENQKVSVIAILGLGGLGKTTLAQLVYNDLEVQNLFEMRMWVCVSDNFDVKTILKKILESITGDQVELSLGNLQRKLHEKISGKKYLLVLDDIWNEKHDKWVELRKYLMCGAQDSKILVTTRSENVAKATSASTSYPLEGLTDEESWSLLKSVAFEDDFKGVNQNLESMGKEIAKKCKGVPLAVKTLGGLLRGQNEESDWENVLHGDFWKLCEEQDSIMPILKLSYHNLSPEMRQCFAYCSLYPKDSKIQKDRLIQLWMAQGYLICSTEKQQMEDVGNQFVKMFLVNSFFQDADSEYGEIISFKMHDLMHDLAMLVAGGDYCYLDSKAEKVEGRPMHVSLESCEAIHLLKSLDPTRLRTLILPYELKEEEYLSVIAKFKYLRVLRMSSFSFYRLSDSIGELKHLRYLDIIDYGFLSGMPVGLGKLCWLQFLSIFVVGDSQETRYGTLNELKDLNLRGELKIQYLDRVRDVALESHDVNLKEKRFLQSLILIWSHRDIRKSDSLKLLENLEPHRTLKQLEVGGYPGMRFPDWLSLLTNVVEISLFCLRNCGCLPPLERLPSLKSLLMDSLYELEYIYLYEDGAVTFFPSLESLFLRGCPKLRGWRRRGDDINDSHNLSSSLSFPHLSQLNVSDCPLLTCMPTFPNAKDLGWLKCSAEPLIGTLNTTESTRSADSSSSAAPLSMLKELAISDHINLPKGWMQNLTSVESLEIIRCESETLEEFEAGFKLDTNCLPPLRKISIRGCENLKALPDWICNLSSLQHIILWNCPKLASLPEGMSGLTNLKIFEVECCVLLVKECRTETSVVSRQIAHIPQIILHD* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0211 1022 Pfam NB-ARC domain 190 431 IPR002182 GO:0043531
Apr10g0211 1022 Gene3D - 429 517 IPR036388 -
Apr10g0211 1022 Gene3D - 343 428 IPR042197 -
Apr10g0211 1022 PANTHER OS05G0414200 PROTEIN 57 920 - -
Apr10g0211 1022 SUPERFAMILY L domain-like 497 919 - -
Apr10g0211 1022 Gene3D - 169 339 IPR027417 -
Apr10g0211 1022 Pfam Rx N-terminal domain 43 115 IPR041118 -
Apr10g0211 1022 SUPERFAMILY RNI-like 890 996 - -
Apr10g0211 1022 PRINTS Disease resistance protein signature 211 226 - -
Apr10g0211 1022 PRINTS Disease resistance protein signature 283 297 - -
Apr10g0211 1022 PRINTS Disease resistance protein signature 380 394 - -
Apr10g0211 1022 PRINTS Disease resistance protein signature 787 803 - -
Apr10g0211 1022 PANTHER DISEASE RESISTANCE PROTEIN RP 57 920 IPR044974 GO:0006952
Apr10g0211 1022 Gene3D - 28 157 - -
Apr10g0211 1022 Gene3D Ribonuclease Inhibitor 849 1012 IPR032675 -
Apr10g0211 1022 Gene3D Ribonuclease Inhibitor 548 848 IPR032675 -
Apr10g0211 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 443 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0211 Apr-Chr10 4930494 4935268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0211 209 467 WRKY Transcription Factor Family AT5G45050 25.547 2.51e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0211 - - aprc:113850647 1430.23