Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0209 ATGAGTGGCCTACATTACTTATCAACCCTTCTTCGTCATTCTCTTTCGCTCATGGCCAAGTTTGAGTCAGTGCCATTTGCTGTTGCATCAAATATTATTCACAGGCTAGCTTCCCCAGATTTTCTTGAATTTGGACAGCATTATGGTGTTATGGAAGAGTTGGAAGCGCTTAAGAAGGCAATTGGATCTATCAATGATGTGCTCCTTGATGCTGACCACAAACAAGATCAAGTTCGTGTGCGTAATTGGATATCTGACTTCAAAGAAGTACTCCATGCTGCAGATGACTTATTAGATGACCTTGCTATCGAGTTTAGGAGAGACAAACGGGATGCAGCAGAAGGAAAAGAAGCAAACAAGGTACTTCGTTCCATTTCATCTTCAAATCAATTTCCTTTGTACAGTGAAATGCCTGACAAAATAAAAGAAATACGAGGAAGTTTTAATGACGTAGTAAAAGAAATGAGGGATTTGAATTTAAGTCCAAGATCAGGGGTGGTTAAGCGAACTAACAGTGAATGGAGGGAAACAAGTTCTTTTGTGTTAGAATCTGATATCATTGGAAGAGATGATAGTAAAAAGGAGATTATTAGTCTGTTGAGACAACCTCATGAAAACCAAAAAGTTTGTGTGTTTGCCATTGTTGGCCTTGGTGGCTTGGGGAAGACAACTCTTGCTCAAGTGGTGTATAATGACTTGGAAGTGCAGAATTGTTTTGAAAAGAAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCTGTTACTCGTCGCCCGACAGCAGATGGGTTGCCATTAGACTACTTGCAAGAAGAACTACGTGAAAATTTAAGTGGTAAGAAATATTTGTTGGTCTTGGATGACATTTGGAATGAGAGACATGACAAATGGGCTGAATTAAGAAAGTACCTGATGTGTGGCGCTCAAGATAGTAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAAGGCAATGACTGCCAACACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGCATCTTGGAGTTTGTTGAAGAGCGTTGCATTTGAGGATGATTTCAAAGGAGTGAATCAAAACCTAGAATCAATAGGGAAAGAAGTAGCCAAAAAATGTAAAGGGGTTCCACTAGCAGTTAAAACCTTGGGAGGCCTGTTACGAGGACAAAACGAAGAAAGTGATTGGGAGAATGTTTTACGTGGTGACTTTTGGAAATTATGTGAAGAGCACGATTGTATCATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTACCCCAAGGATTCAAAAATTCCAAAAGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCAACTGAAAAACAACACATGGAGGATGTCGGTAATCAATTTGTAAAGATGTTTTTGATGAACTCATTTTTTCAAGATGCGGATAGTGAATACGGTGAAATCATTAGCTTCAAAATGCACGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTATTGTTACTTGGATAGAAAGGCAGAAAAAGTTGAAGGTAGACCCATGCACTTATCATTGGAATCTTATAAGGCCATTCATTTGTTGAACTCATTAGATCCGCGCAGGCTGCGAACTTTGATTTTGCCTTTGATTTTGCCGTCTGACTTAAAAAAGGAGGAATATTTGCCGGTTATTGCAAAGTTCAATTACTTACGCGTCTTGAGAATGCATCATCTCCCTGATTCCACTGAAAATTTGAAGCATTTAAGATACCTTGTTTTAACACAACCAAAAAGTCTTCCCAAATCTATAAGCAATCTTGTTTGCTTACAAACATTAAAACTCAAAGATTGCGATGAAGAATCATTTAGAGAAGTAGTCACAAAATTAGTTAATTTGAGGTGCCTTGATATTGCTCGTCATTGCTTGAGTGGAATGGCAGTTGGGTTGGGAAAACTATGCTCTTTGCAATTCTTATCGACCTTTGTTGTGGGAGACAGCCAAGAAATAAAATATGCCACATTAAATGAACTGAAGGCCTTAAACCTCAGAGGCAAATTAAGAATTGAGCATCTCAATCGTGTCAGAGAAGTGGCTCTTGAATCACAGCACGTAAATTTAAAAGAAAAAAAATTTCTTCAATCCTTGACTCTGGATTGGTCGGGGGATGAAGACCGCCTTAACAGTGACGACAGGTTGCAATTATTGGAAAACCTTGAGCCCCACAGTAATCTTAAGCGATTAGAGGTGAATCATTATCCAGGTGTGCTTTTCCCAAATTGGCTGTCTCTCCTCACAAATGTTGTTCACATCCGTCTCTCTGAGGTTTCTAAATGCCGCTGTCTCCCTCCGTTGGAACGTCTCCCGTCTCTGAAGTCCCTTGATATATGGTCTCTTCATGAATTGGAATACATATACCTCTGCGAAGATGGCTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAGCCTCATGTTAGAAGATTGTCCCAAGTTCAGGGGATGGCGGAGGCGGGGAGATGATATCAATGATTCACATAATCTCTCTTCATCTCTTTCATTTCCTCATCTTTCTCATCTGCAACTCTATCTCTGTCCACAGTTGACTTGCATGCCTTCCTTTCCAAACGTTAAGGATTTAAAATGGTACAAATGCAGTGCGGAGCCATTAATAGCAACACTAAACACGTCAACATGTTCATCTGACTCATCTTCCTCCGCTGCTCCTCTTTCAGTGCTCAAACAATTGAAGATTTCTGATCCTATGAATTTACCAAAGGGTTGGATGCATAATCTGACTTCTCTCGAGTCTCTTAAAATTGAATTGTGTGAAAGTGAAACACTTGAGGAATTTGGAATTTGGTTTAAGGACGACACCAACTGCCTTCCGTCTATGCGAAAAATCAACATATATCAGTGTGAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACTTCTCATCGCTTCAACGCATCAAGCTCAGGAGGTGCCCAAAATTGGCATCTCTGCCCGAAGGAATGAGTCTTATCAACTTAAAGATGTTTGAAGTGAAGAAATGTTCCCTCTTACTTGAAGAATGCCGAACAGAGACAAGTGCTGTTAGTCGCCAAATCGCACACATCCCACAAATCATCCTTCGTGATTAG 3201 0.3974 MSGLHYLSTLLRHSLSLMAKFESVPFAVASNIIHRLASPDFLEFGQHYGVMEELEALKKAIGSINDVLLDADHKQDQVRVRNWISDFKEVLHAADDLLDDLAIEFRRDKRDAAEGKEANKVLRSISSSNQFPLYSEMPDKIKEIRGSFNDVVKEMRDLNLSPRSGVVKRTNSEWRETSSFVLESDIIGRDDSKKEIISLLRQPHENQKVCVFAIVGLGGLGKTTLAQVVYNDLEVQNCFEKKMWVCVSDNFDVKTILKKILESVTRRPTADGLPLDYLQEELRENLSGKKYLLVLDDIWNERHDKWAELRKYLMCGAQDSKILVTTRSENVAKAMTANTSYPLKGLTDEASWSLLKSVAFEDDFKGVNQNLESIGKEVAKKCKGVPLAVKTLGGLLRGQNEESDWENVLRGDFWKLCEEHDCIMPILKLSYHNLSPEMRQCFAYCSLYPKDSKIPKDELIQLWMAQGYLKCSTEKQHMEDVGNQFVKMFLMNSFFQDADSEYGEIISFKMHDLMHDLAMLVAGNDYCYLDRKAEKVEGRPMHLSLESYKAIHLLNSLDPRRLRTLILPLILPSDLKKEEYLPVIAKFNYLRVLRMHHLPDSTENLKHLRYLVLTQPKSLPKSISNLVCLQTLKLKDCDEESFREVVTKLVNLRCLDIARHCLSGMAVGLGKLCSLQFLSTFVVGDSQEIKYATLNELKALNLRGKLRIEHLNRVREVALESQHVNLKEKKFLQSLTLDWSGDEDRLNSDDRLQLLENLEPHSNLKRLEVNHYPGVLFPNWLSLLTNVVHIRLSEVSKCRCLPPLERLPSLKSLDIWSLHELEYIYLCEDGFAVTFFPSLESLMLEDCPKFRGWRRRGDDINDSHNLSSSLSFPHLSHLQLYLCPQLTCMPSFPNVKDLKWYKCSAEPLIATLNTSTCSSDSSSSAAPLSVLKQLKISDPMNLPKGWMHNLTSLESLKIELCESETLEEFGIWFKDDTNCLPSMRKINIYQCERLKALPDWICNFSSLQRIKLRRCPKLASLPEGMSLINLKMFEVKKCSLLLEECRTETSAVSRQIAHIPQIILRD* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0209 1066 Pfam Rx N-terminal domain 43 116 IPR041118 -
Apr10g0209 1066 Gene3D - 431 519 IPR036388 -
Apr10g0209 1066 Gene3D - 169 341 IPR027417 -
Apr10g0209 1066 PANTHER DISEASE RESISTANCE PROTEIN RP 54 964 IPR044974 GO:0006952
Apr10g0209 1066 Pfam NB-ARC domain 190 432 IPR002182 GO:0043531
Apr10g0209 1066 PANTHER OS05G0414200 PROTEIN 54 964 - -
Apr10g0209 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 445 IPR027417 -
Apr10g0209 1066 Gene3D Ribonuclease Inhibitor 558 855 IPR032675 -
Apr10g0209 1066 PRINTS Disease resistance protein signature 211 226 - -
Apr10g0209 1066 PRINTS Disease resistance protein signature 285 299 - -
Apr10g0209 1066 PRINTS Disease resistance protein signature 382 396 - -
Apr10g0209 1066 PRINTS Disease resistance protein signature 805 821 - -
Apr10g0209 1066 Gene3D - 29 141 - -
Apr10g0209 1066 Gene3D Ribonuclease Inhibitor 891 1057 IPR032675 -
Apr10g0209 1066 SUPERFAMILY L domain-like 871 1041 - -
Apr10g0209 1066 Gene3D - 345 430 IPR042197 -
Apr10g0209 1066 SUPERFAMILY L domain-like 509 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0209 Apr-Chr10 4857109 4860494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0209 210 469 WRKY Transcription Factor Family AT5G45050 26.545 2.18e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0209 - - aprc:113850108 1429.08