Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0206 ATGGACGAGGATCAAGAAATGGAACGATTCGGAATGGAGAATGATTACGAAGGTGGGCAATGGATCGGTGGTGAGTTCTACTACCGGAAACGCAAAGAAAAACGCACCCAGACCAAGGACGATGTTTTGTACGGTGTTTTTGCGGATTCCGATGACGACGAAGACAATGATTATTCTAGCAGAAAACGGAGAAAGGACCGCGATTTTTCGAAGAAGCAGGACCTTACTAAACCTGTGAATTTTGTGTCTACGGGCACTTTTATGCCCAATCAAGAAATTGTTGATAATAAGGCCAAAGAGCATGATGAGAAGGATGGCTATGGTAGTGATGATAGGCCAGGGTTAGGGTTAGGGTTAGGGCTTGGTGCGGGGTCTGCTAGTACTTCAGGCGCTGGTTTAGGGTTTAATTCTGGTAAGGTTGCTAATGGTTCTGATAGAAATGATGATTCTGAGGAGAATGACGATGGTGGCGATGATAATTTTTTGCCTACAGCATTTGGGAAGAAGCTTAAGGAGGGGGCAATGAGGAGGGAGAGAGAGAGGTTGGAGAAGAAGAGGGGGCAGCGACAGAATTTAGGTCAAGATGGGTTTGGTGATGTTGGGAAGTTTGAGAAGCATACGAAGGGGATTGGGCTGAAGCTGTTGGAGAAGATGGGTTATAAAGGGGGTGGGCTTGGGAAGAATGAGCAAGGTATTGTGGCTCCCATTGAAGCAAAATTGAGAGCAAAGAATTCTGGTATTGGGTTTAATGACTCTAAGGAGGCTGTGCCGTTGCCCGCTTTGCAGCAAGAGAAGAAGAGCGTACCGGGAGTCACACAAACTACAGTCAGTAGAACGAAGGAAAGGTTGTGGTCGAAGCAGACGAGGCTGAAGAAGAAGAAAGAGGAGGAAGAGTATGTAACTGCAGAAGAGTTGTTGGCGAGCAAGCAAGAACAAGAGCTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCGCAGGTTCGGGTGTTGACAAATTTGTCTGATTTGAATGCAGAGGAGAAAGCAAAAGAAAATGATGTCCCAATGCCGGAACTTCAGCATAATGTAGCGTTAATAGTTCGGTTGGCTGAGGCTGACATCCAAGAGATTGATAGAGATTTGAGAAGAGAGAGGGAGACGGCGCTTAGCTTGAAAAAGGAAAAAGAGAAGTTAGAAACTGAGGCAGCGTTTCAAAAGAAGCAGCTGGATTATTTGGAGGAAATAATGAGGGTGTTGGAGCGAGTCGGAGAAGATAACACTTTAGGAACATTGACATTGGATTCACTTGCTCAATGCTTTAGGGACTTGCACACAAGATATGCTGATAACTACAAGTTGTGTAATTTATCGTGCATTGCTTGCTCATATGCTCTGCCTTTGTTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCGAAATCCATCTCATGGGTTGGAGTTGGTATCACAGTGGAAGGTGTTGCTTGAAGGAGAAGATTCTGTCGATATATGGGATATATCATCACCTTATTCTCAATTGGTTTCGGAGGTTGTATTGCCAGCTGTCAGAATATCTGGTATCAATACCTGGCAAGCACGGGATCCTGAACCAATGTTGCGGTTTCTGGAATCATGGGAAAAGTTACTTCCTCCTTCAGTCCTTGCTACCGTATTAGACAATATAGTCATGCCAAAACTGTCAAGTGCTGTAGATACTTGGGAACCACATCGTGAGACCATTCCTATTCACACTTGGGTGCATCCATGGCTGCCTCTGCTGGGACACAAGTTGGAGGGTATTTATCAGGTGATTCGTTTCAAGTTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGGTTCTGCTTATGCTATATTGTCTCCTTGGAAGACTGTATTTGATTCTGCAAGTTGGGAACAACTTATGCTTCGTTTTATTGTACCAAAGTTGCAGCTTGTCTTGCAAGAGTTCCAAGTGAACCCGGCAAGTCAGAATCTTGATCAATTTTACTGGGTAATGAACTGGGCTTCTGTCATTCCTATTCATCTGATGGTTGATATGATGGAGAAAGTCTTCTTTGCCAAATGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTACAAAATGGTATTTGGGATGGAAAGACCTTATTCCAAAAGAACTTTTGGCAAATGAAAGTATTCGATACCAGCTTAATCGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTAAAGGAGAATATCAGCTATCTTAGGGTACTTGAGCAAAGGCAATTCGAGGCTCAGCAGAAAGCAGCTGCCTATGCTCAACAGCAAGCTGCTGCAAGCGTGGGTGGTGCAGTCAACGCTGATGGTGTGCATGAGTTGAGCTTGAAAGAAGTCATTGAAGCCCATGCTCAGCAACATGGTTTACTATTCAAGCTTAAGCCTGGTAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAGCATAATAATAGACTCTCAACATCAAAAGGTATATGCCCAAAATGAAGAAACATGGTCTTTGGAATCCCTTCAAGGCTTGCTAGAGTTGCATAATAAATCCCTTACTAAAAGACGCTGA 2622 0.4405 MDEDQEMERFGMENDYEGGQWIGGEFYYRKRKEKRTQTKDDVLYGVFADSDDDEDNDYSSRKRRKDRDFSKKQDLTKPVNFVSTGTFMPNQEIVDNKAKEHDEKDGYGSDDRPGLGLGLGLGAGSASTSGAGLGFNSGKVANGSDRNDDSEENDDGGDDNFLPTAFGKKLKEGAMRRERERLEKKRGQRQNLGQDGFGDVGKFEKHTKGIGLKLLEKMGYKGGGLGKNEQGIVAPIEAKLRAKNSGIGFNDSKEAVPLPALQQEKKSVPGVTQTTVSRTKERLWSKQTRLKKKKEEEEYVTAEELLASKQEQELEVVQKVYDMRGPQVRVLTNLSDLNAEEKAKENDVPMPELQHNVALIVRLAEADIQEIDRDLRRERETALSLKKEKEKLETEAAFQKKQLDYLEEIMRVLERVGEDNTLGTLTLDSLAQCFRDLHTRYADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQWKVLLEGEDSVDIWDISSPYSQLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPPSVLATVLDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGIYQVIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPASQNLDQFYWVMNWASVIPIHLMVDMMEKVFFAKWLQVLYHWLCSNPNFEEVTKWYLGWKDLIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQQQAAASVGGAVNADGVHELSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSQHQKVYAQNEETWSLESLQGLLELHNKSLTKRR* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0206 873 MobiDBLite consensus disorder prediction 129 143 - -
Apr10g0206 873 Pfam GC-rich sequence DNA-binding factor-like protein 427 694 IPR022783 -
Apr10g0206 873 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 860 - -
Apr10g0206 873 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 860 IPR045211 GO:0000390
Apr10g0206 873 Pfam G-patch domain 207 248 IPR000467 GO:0003676
Apr10g0206 873 MobiDBLite consensus disorder prediction 170 190 - -
Apr10g0206 873 Coils Coil 175 195 - -
Apr10g0206 873 MobiDBLite consensus disorder prediction 40 200 - -
Apr10g0206 873 SMART G-patch_5 205 250 IPR000467 GO:0003676
Apr10g0206 873 MobiDBLite consensus disorder prediction 76 91 - -
Apr10g0206 873 MobiDBLite consensus disorder prediction 55 74 - -
Apr10g0206 873 MobiDBLite consensus disorder prediction 94 110 - -
Apr10g0206 873 PIRSF TFIP11 1 868 IPR024933 -
Apr10g0206 873 ProSiteProfiles G-patch domain profile. 207 252 IPR000467 GO:0003676
Apr10g0206 873 Coils Coil 361 409 - -
Apr10g0206 873 Coils Coil 292 312 - -
Apr10g0206 873 Pfam Tuftelin interacting protein N terminal 4 104 IPR022159 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0206 207 248 C2H2 Transcription Factor Family AT5G26610 50.000 3.30e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0206 K13103 - gmx:100783256 1460.66