Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0205 ATGTATTGTGAGCAAAAAACTGTCACCACCATGCTTCAGAAACCAGGTTCTTTGCCTATTACCCCTAAAGTTATTCGGATTTCACTGATTGATCATTATGCGACAGATTCTTCCAGTGAAGATGAAGAAGAAGGTTTTGTTCATCGTCCTATAGTGAAGAAAGTGGTGAATGAGATAAGAATTGGGTGTAACAAGAACAAAAAGAAGACAGAAAATGATGATGATTGTGGTGGGTGTGGGCTGAAAGAGAATCATAGGCCTAAACAAGAAGATCAAAAGGTTCTGAACAAGCACAAGTTTCGCGGGGTTCGGCAAAGGCCTTGGGGAAGATGGGCTGCAGAGATAAGAGACCCTTTAAAAAGAACAAGAGTTTGGTTAGGTACTTATGACTCTGCTGAAGAAGCTGCTTTGGCTTATGATAGAGCTGCTATTCGATTACGAGGTGCTGATGCTTTAACCAATTTCATTAAGCCACCCAAGAACTCTAAAGATGAAGAAGTTGGGTGTGTTGATTGTGATAGTGTTGGTGATGGAGTGAGCTGTGCGGTTGATTCTGGCAATGAGTGTGTTGTTTCATCTTCACCCACTTCTTTTCTTGTGTTTCAGCCTTGGAATAAATTGGTGGATGTGGGAGAAGTGTTTAAAGAGTTCACTTATGATGATGGCATTTTGTATCTTGATGCTTGTTATCCACATTATGAGCCGCTTCCTCTGCTGCTTTCTTCTGCCAATGAGGATTGCATTGGTGTTCCGTTAATCAATCTTGATGAGGATTTTGAGTCATGTAAATGGGACGTAGATAGTTACTTTAGTGACCCTTAA 822 0.4088 MYCEQKTVTTMLQKPGSLPITPKVIRISLIDHYATDSSSEDEEEGFVHRPIVKKVVNEIRIGCNKNKKKTENDDDCGGCGLKENHRPKQEDQKVLNKHKFRGVRQRPWGRWAAEIRDPLKRTRVWLGTYDSAEEAALAYDRAAIRLRGADALTNFIKPPKNSKDEEVGCVDCDSVGDGVSCAVDSGNECVVSSSPTSFLVFQPWNKLVDVGEVFKEFTYDDGILYLDACYPHYEPLPLLLSSANEDCIGVPLINLDEDFESCKWDVDSYFSDP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0205 273 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 2 206 - -
Apr10g0205 273 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED 2 206 - -
Apr10g0205 273 CDD AP2 99 155 IPR001471 GO:0003700|GO:0006355
Apr10g0205 273 Gene3D AP2/ERF domain 98 157 IPR036955 GO:0003700|GO:0006355
Apr10g0205 273 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Apr10g0205 273 PRINTS Ethylene responsive element binding protein signature 122 138 IPR001471 GO:0003700|GO:0006355
Apr10g0205 273 SUPERFAMILY DNA-binding domain 99 155 IPR016177 GO:0003677
Apr10g0205 273 SMART rav1_2 99 162 IPR001471 GO:0003700|GO:0006355
Apr10g0205 273 Pfam AP2 domain 99 148 IPR001471 GO:0003700|GO:0006355
Apr10g0205 273 ProSiteProfiles AP2/ERF domain profile. 99 156 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0205 Apr-Chr10 4774518 4775339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0205 2 273 AP2-EREBP Transcription Factor Family AT4G27950 34.708 4.63e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr10g0205 AP2 4.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0205 - - gmx:100779645 229.565