Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0204 ATGGAAAACGTTCCATTTGCTGTTGCGTCTAATCTCATTCACAGGTTGGCTTCCTCAGATTTTCTTGAATTTGGAAAGCATTATGATGTGACGGAAGAGTTGGAAGAGCTTAAGAACACTATTGAATCCATCAATGCTAAGCTCCTTGATGCCGACGATAAACAAGATCAAGATGATGGTGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTCCACACTGCAGATGACTCCTTAGATGACCTTGCTATCCAATTCAGGAGAGACAAACTGGATGCAGCAGAAGGAAAAGAAGTAGACAAGGTACTTCTTTTCATTTCATCTTCAAATCAACTTCCTTTATACACTGAAATGCCTGACAAAATTAAAGAAATACGAGAAAGTTTTAATGGTGTAGTAGAAGACATGGATAAATTGAATTTAAGCCCAGGTTCTCTGGTTAAGCAAACTAACAGTGAATGGAGGGAAACATGTTCTTTTGTGCTAGAATCTGATATCATTGGAAGAGATGATAGTAAAAAGGAGATTATTAGTCTGTTGAGACAAACTCATGAAAACAGAAAAGTTTCTGTGATTGCTATTTTTGGCCTCGGTGGCTTGGGGAAGACAACGCTTGCTCAGTTGGTGTATAATGACTTGGAAGTGCAGAATTGTTTTGAAAAGAAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTGGAATCAGTTACTCGTCGCCCGACAGCAGATGGGTTGTCATTAGACTACTTGCAAGAAGAACTTCGTGAAAATTTAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACGTGACAAATGGATTGAATTGAGAAAGTATTTGATGTGTGGCGCTCAAGATAGTAAAATTTTAGTGACAACTCGAAGTGAAAATGTAGCAGAGGCAATGACTGCCAGCACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGCATCTTGGAGTTTGTTGAAGAGCGTTGCATTTGAGGATGATTTGAAAGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTGGCAGTTAAAACCCTGGGAGGCCTGTTAGGAGGACAAAACGAAGAAAGTGTATGGGAGAATGTTTTAAGCGGTGACTTCTGGAAATCATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCGCAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTACCCCAAGGATTCTAGAATTCAAAAGGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTCAATGTTCAACTGAAAAACAGCAGATGGAGGATGTCGGTAATCAATTTGTAAAGATATTTTGGATGAACTCATTTTTTCAAGATGCGGATGGTGAATTCGGTGAGATCATTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCTAGTAGCTGGCAGTGATTATTGTTACTTGGATAGTAAGGCAGAAAAAGTTGAAGGTAGACCCATGCACGTATCATTGGAATCTGAAGAGGCCATTCATTTGTTGCAATCATTAGATCCGACCAGGCTGCGAACTTTGATTTTTCCATATTACTTGAGAGAGGAGGTAGATTTGTCGGTGATTGCAAAGTTCAAATACTTACGTGTCTTGAGGATGGATTCTCTCTCTGATTCCACTGAACATTTGAAGCATTTAAGATACCTTGCTTTAATAAGTCTTCCCAAATCTCTGAGCAATCTTGTTTTCCTACAAACATTAAAATTGTTGATGTGCGACGAAGAATCATTTTCAGAAGTAGTCACAAAATTGGTCAATTTGAGGTGCCTTGCTATTGCTAACCCCATGAGTGGGATGGCAGTTGGATTGAGAAAATTATGCTCTTTGCAATTATTATCGACCTTGGTTGTGGGAGACAGCCAAGAAATAAAATATGGCACACTAAATGAACTGAAGGACTTAAACCTAATAAGAGGCAAATTAGAAATTGTGCATCTGAATCGTGTGAGAGACGTGGCTCTGGAATCCCAGCACGTAAATTTAAAAGGAAAAAAATTCCTTGAATTCTTGATTCTGGATTGGTCGCGTGAAGACCTTCGTAACACTGACAGCTTGCAATTATTGGAAAACCTTCAGCCACACCGCAATCTCAAGCGATTGGAGGTGAATAATTATCCAGGCGTGCTTTTCCCAAATTGGCTCTCTCTCCTCACAAATGTTATTCACATCACTCTCTGGGGGTTTGATAATTGTCGGTGTCTCCCACCGTTGGAACGTATCCCGTCCCTGAAGTCACTTAAGATAGACTGTCTTTATGAATTGGAATGCATATATCTCTGCGAAGATGGTTTTGCATTAACCTTCTTCCCCTCTTTGGAGAGCCTTACAATAACACGTTGTCCCAAGTTCAGGGGATGGCGGAGGCGGGGAGATGATATCAATGATTCACATTATCTCTCCTTACCTCTTTCATTTCCTCATCTTTCTCAACTACACATCTCTAGCTGTCCACAGTTGACTTGCATGCCTACTTTTCCAAAAGTTGAGAATTTGAACTTGTATCACTGCAGTGCAGAGCCATTAACAGCAACACTAAACTCAACATGTTCACCCGATTCATCTTCCTCCGCTGCTCCTCTCTCCATGCTCAAACAATTGATGATTTCTGATCGTATGAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTTCTAATTCAATGGTGTGAAAGTGAAACACTTGAGGAATTTGAAACTGGGTTTAAGGACGACACCAACTGCCTTCCTTCTCTGCGAAAAATCAGCATACATGGGTGTAATAGGCTAAAGGCCTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGCATATCGAGATCTACTTTTGCCGAAATTTGGCATCGCTGCCCGAAGGAATGAGTGGTCTTACCAACTTAAAGATCTTTGAGGTCTATGGTAGTCTCCTCTTAGTTAAAGAATGCCGAATAGAGACAAGTGCTGTTAGTCGCCAAATCGCGCATATCCCACAAATAATCCTTCATGATTAG 3114 0.4004 MENVPFAVASNLIHRLASSDFLEFGKHYDVTEELEELKNTIESINAKLLDADDKQDQDDGVRVWIRRFKKVLHTADDSLDDLAIQFRRDKLDAAEGKEVDKVLLFISSSNQLPLYTEMPDKIKEIRESFNGVVEDMDKLNLSPGSLVKQTNSEWRETCSFVLESDIIGRDDSKKEIISLLRQTHENRKVSVIAIFGLGGLGKTTLAQLVYNDLEVQNCFEKKMWVCVSDNFDVKTILKKILESVTRRPTADGLSLDYLQEELRENLSGKKYLLVLDDIWNERRDKWIELRKYLMCGAQDSKILVTTRSENVAEAMTASTSYPLKGLTDEASWSLLKSVAFEDDLKGVNQNLESMGKEIAKKCKGVPLAVKTLGGLLGGQNEESVWENVLSGDFWKSCEEQDSIMPILKLSYRNLSPEMRQCFAYCSLYPKDSRIQKDELIQLWMAQGYLQCSTEKQQMEDVGNQFVKIFWMNSFFQDADGEFGEIISFKMHDLMHDLAMLVAGSDYCYLDSKAEKVEGRPMHVSLESEEAIHLLQSLDPTRLRTLIFPYYLREEVDLSVIAKFKYLRVLRMDSLSDSTEHLKHLRYLALISLPKSLSNLVFLQTLKLLMCDEESFSEVVTKLVNLRCLAIANPMSGMAVGLRKLCSLQLLSTLVVGDSQEIKYGTLNELKDLNLIRGKLEIVHLNRVRDVALESQHVNLKGKKFLEFLILDWSREDLRNTDSLQLLENLQPHRNLKRLEVNNYPGVLFPNWLSLLTNVIHITLWGFDNCRCLPPLERIPSLKSLKIDCLYELECIYLCEDGFALTFFPSLESLTITRCPKFRGWRRRGDDINDSHYLSLPLSFPHLSQLHISSCPQLTCMPTFPKVENLNLYHCSAEPLTATLNSTCSPDSSSSAAPLSMLKQLMISDRMNLPKGWMQNLTSLESLLIQWCESETLEEFETGFKDDTNCLPSLRKISIHGCNRLKALPDWICNLSSLQHIEIYFCRNLASLPEGMSGLTNLKIFEVYGSLLLVKECRIETSAVSRQIAHIPQIILHD* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0204 1037 Gene3D Ribonuclease Inhibitor 524 839 IPR032675 -
Apr10g0204 1037 PRINTS Disease resistance protein signature 191 206 - -
Apr10g0204 1037 PRINTS Disease resistance protein signature 265 279 - -
Apr10g0204 1037 PRINTS Disease resistance protein signature 362 376 - -
Apr10g0204 1037 PRINTS Disease resistance protein signature 948 964 - -
Apr10g0204 1037 SUPERFAMILY L domain-like 912 1008 - -
Apr10g0204 1037 Gene3D - 151 321 IPR027417 -
Apr10g0204 1037 SUPERFAMILY L domain-like 478 935 - -
Apr10g0204 1037 Gene3D - 325 410 IPR042197 -
Apr10g0204 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 425 IPR027417 -
Apr10g0204 1037 Coils Coil 27 54 - -
Apr10g0204 1037 Gene3D - 9 124 - -
Apr10g0204 1037 Pfam NB-ARC domain 170 412 IPR002182 GO:0043531
Apr10g0204 1037 PANTHER OS05G0414200 PROTEIN 31 933 - -
Apr10g0204 1037 PANTHER DISEASE RESISTANCE PROTEIN RP 31 933 IPR044974 GO:0006952
Apr10g0204 1037 Gene3D - 411 499 IPR036388 -
Apr10g0204 1037 Gene3D Ribonuclease Inhibitor 862 1021 IPR032675 -
Apr10g0204 1037 Pfam Rx N-terminal domain 11 94 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0204 Apr-Chr10 4744297 4753037 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0204 189 379 WRKY Transcription Factor Family AT5G45050 26.829 7.61e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0204 - - aprc:113850108 1421.37