Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0203 ATGGGGACGAGAAGAGATGATGGTTTCCTTGTTCTTGATGATGGCACAACACTTATGGTTAAGAGACTGCAGCAATCTCAGCACTCTGAGAAAGAATTTATGTCTAAAATGGGTTTCTGCATGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAACAGGCCAAATGGCAACCTCTATGATCAACTACATCCTGCAGATGGTGGGAGCACTCTTGACTGGTCCATGAGGCTCAAAATTGCACTTGGAGCAGCCAAAGGTTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACTGAAACGTAAGCGCAAAGTGCATTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAGACTGATAAACCCAATTGATACTCATCTGAGTACTTTCGTAAATGGCGAGTTTGGGGATTTTGGATATGTTGCTCCTGAATACACTGGAACTTTGGTTGCTACCCCGAAGGGGCATATTTATAGCTTTGGAACTGTGCCTCTTGAGTTGGTGACTGGTGAAAGACCTACCACTGTGGCTAAAGCTCCAGAAACTTTTAAAGGAAATCTAGTAGAATGGATTACAGAGCTCTCAAGCAACTCACAACTCCAGGATGCCAGTGATGAATCACTAGTTGGCAAGGGTGATGATAACGAGCTTTTCCAATTTTTAAAGGTTGCGTGCAACTGTGTTGTACCAACTCCTAAGGAGAGGCCCACCATGTTTGAAGTATATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATATAACAACTGAGGATGACTTGTTGTTACCTACAGATATTGGTGACACTGAAAACTTGGAGGAACTTATTGTAGCTCGAGAAGGAAATGTATGA 861 0.4286 MGTRRDDGFLVLDDGTTLMVKRLQQSQHSEKEFMSKMGFCMAKKERLLVYKNRPNGNLYDQLHPADGGSTLDWSMRLKIALGAAKGLAWLHHSCNPRIIH*NVSAKCIDFEPKISDFGLARLINPIDTHLSTFVNGEFGDFGYVAPEYTGTLVATPKGHIYSFGTVPLELVTGERPTTVAKAPETFKGNLVEWITELSSNSQLQDASDESLVGKGDDNELFQFLKVACNCVVPTPKERPTMFEVYQLLRAIGGRYNITTEDDLLLPTDIGDTENLEELIVAREGNV* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0203 285 Pfam Protein tyrosine and serine/threonine kinase 29 245 IPR001245 GO:0004672|GO:0006468
Apr10g0203 285 ProSiteProfiles Protein kinase domain profile. 1 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0203 285 PANTHER LRR RECEPTOR-LIKE KINASE 11 262 - -
Apr10g0203 285 PANTHER RECEPTOR-LIKE PROTEIN 55 11 262 - -
Apr10g0203 285 SUPERFAMILY Protein kinase-like (PK-like) 12 247 IPR011009 -
Apr10g0203 285 Gene3D Transferase(Phosphotransferase) domain 1 54 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0203 Apr-Chr10 4740828 4742334 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0203 12 261 Receptor kinase-like Gene Family AT1G27190 45.421 1.70e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Apr10g0203 PK_Tyr_Ser-Thr 2.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0203 - - aprc:113850634 564.303