Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0202 ATGGCTGATTCAGTTCCATTTGCTGTTACTTCAAATCTCAGGTTGGCTTCCTCAGATTTTCTTGAATTTGGAAAGCATTATGATGTGACGGAAGAGTTGGAAGAGCTTAAGAACACTATTGAATCCATCAATGCTAAGCTCCTTGATGCCGACGATAAACAAGATCAAGATGATGGTGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTCCATACTGCAGATGACTCCTTAGATGACCTTGCTATCCAATTCAAGAGAGACAAACTGGATGCAGCAGAAGGAAAAGAAGTAGACAAGGTACTTCTTTCCATTTCATCTTCAAATCAACTTCCTTTATACACTGAAATGCCTGACAACATTAAAGAAATACGGGAAAGTTTTAATGGTGTAGTAGAGGACATGGATAAATTGAATTTAAGCCCAGGTTCTCTGGTTAAGCAAACTAACAGTGAATGGAGGGAAACATGTTCTTTTGTGCTAGAATCTGAAATCATTGGAAGAGATGATAGTAAAAAGGAGATTATTAGTCTGTTGAGACAACCTCATGAAAACAGAAAAGTTTCTGTGATTGCTATTTTTGGCCTCGGTGGCTTGGGGAAGACAACGCTTGCTCAGTTGGTGTATAATGACTTGGAAGTGCAGAATTGTTTTGAAAAGAAAATGTGGGTGTGTGTCTCTGATAACTTCGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAGTTACTCGTCGCCCCACAGCAGATGGGTTGTCATTAGACTACTTGCAAGAAGAACTTCGTGAAAATTTAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACGTGACAAATGGATTGAATTGAGAAAGTATTTGATGTGTGGCGCTCAAGATAGTAAAATTTTAGTGACAACTCGAAGTGAAAATGTAGCAGAGGCAATGACTGCCAGCACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGCATCTTGGACTTTGTTGAAGAACATTGCATTTGAGGATGATTTCAAAGGAGTGAATCAAAATCTAGAATCAATGGGAAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTGGCAGTTAAAACCCTGGGAGGCGTGTTAGGAGGACAAAAAGAAGAAAGTGTATGGGAGAATGTTTTAAGCGGTGAATTCTGGAAATCATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCGCAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTACCCCAAGGATTCTAGAATTCAAAAGGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTCAATGTTCAACTGAAAAACAGCAGATGGAGGATGTCGGTAATCAATTTGTAAAGATATTTTGGATGAACTCATTTTTTCAAGATGCGGATGGTGAATACGGTGAGATCATTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCTAGTAGCTGGCAGTGATTATTGTTACTTGGATAGTAAGGCAGAAAAGGTTGAAGGTAGACCAATGCACGTATCATTGGAATCTGATGAGGCCTTTCATTTGTTGAAATCATTAGATCCGAGCAGGCTGCGAACTTTGATTTTTCCGTATTACTTTGAAGAGGAGGTAGATTTGTCGGTGATTGCAAAGTTCAAATACTTACGTGTCTTGAGGATGGATTGTCTCTCTGATTCCACTGAACATTCGAAGCATTTAAGATACCTTGATTTATTGCAACAAACAAGTCTTCCCAAATCTATGAGCAATCTTGTTTTCTTACAAACATTAAAATCGTGGGAGTGTGATGAAGAATCATTTTCAGAAGTAGTCACAAAATTAGTCAATTTGAGGTGCCTTGAAATTGCTGAGTATGAATCTATGAGTGGGATGGCAGGGTTGGGAAAATTATCCTCATTGCAATTCTTATCGACCTTTGTTGTGGGAGACAGCCAAGAAATAAAATATGGGACACTAAATGAACTGAAGGACTTAAACCTAATAAGAGGCAAATTAGAAATTAAGTGTCTCAATCGTGTGAGAGACGTGGCTCTGGAATCACAGAATGTAAATTTAAAAGAAAAAAAATTCCTTCAATCCTTGACTCTGAATTGGTCCCTATTTGGAGACCTCTTTAACAGTGACAGCTTGCAATTATTGGAAAACCTTGAGCCCCACCTTAATCTTAAGCAATTGGAGGTGAATTATTATCCAGGCGTGCTTCTCCCAAATTGGCTTTCTCTTCTCACAAATGTTGTTGACATCACTCTCTGGGGGTTTGATAACTGTCGCTGTCTCCCTCCGTTGAAACGTCTCCCGTCCCTGAAGTCACTTGCGATACACACTCTCAACGAATTAGAATACATAGATCTCTACGAAGATGGTTTTGCAGTGACCTTCTTCCCCTCTTTGGAGAGCCTCATATTAGATAATTGTCCGAAACTCAGGGGATGGCGGAGGCGGGGAGATGATATCAATGATTCACATAATCTCTCCTTACCTCTTTCATTTCCGCATCTTTCTCAACTATTTGTCTCTAAATGTCCACAGTTGACTTGCATGCCTACTTTTCCAAACGTTAAGGATTTAAACTGGTGTCATAGCAATGCGGAGCCATTAACAGGAACATTAAACTCAACATGTTCAGCTGACTCATCTTCCTCCGCTGCTCCTCTTTCAGTGCTCAAAGAATTGCAGATTTCTGATCCTATGAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTTAAAATTCAATCACGTGAAAGTGAAACACTTGAGGAATTTGAAATGGGGTTTAAGGACGACACCGACTGCCTTCCTTGTCTGCGAAAAATCGGCATATGGGAGTGTGAAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCAGCGCTGCAGCACATCATGATCTACGGTTGCCCAAAATTGGCATCGCTGCCCAAAGGAATGCGTGGTCTTACCAACTTAAAGATGTTTGAAGTGAGGAAATGTTCCCTCTTACTTGAAGAATGCCGAACAGAGACAAGTGCTGTTAGTCGCCAAATCGCACACATTCCACAAAAAATCCTTCGTGATTAG 3126 0.3976 MADSVPFAVTSNLRLASSDFLEFGKHYDVTEELEELKNTIESINAKLLDADDKQDQDDGVRVWIRRFKKVLHTADDSLDDLAIQFKRDKLDAAEGKEVDKVLLSISSSNQLPLYTEMPDNIKEIRESFNGVVEDMDKLNLSPGSLVKQTNSEWRETCSFVLESEIIGRDDSKKEIISLLRQPHENRKVSVIAIFGLGGLGKTTLAQLVYNDLEVQNCFEKKMWVCVSDNFDVKTILKKILESVTRRPTADGLSLDYLQEELRENLSGKKYLLVLDDIWNERRDKWIELRKYLMCGAQDSKILVTTRSENVAEAMTASTSYPLKGLTDEASWTLLKNIAFEDDFKGVNQNLESMGKEIAKKCKGVPLAVKTLGGVLGGQKEESVWENVLSGEFWKSCEEQDSIMPILKLSYRNLSPEMRQCFAYCSLYPKDSRIQKDELIQLWMAQGYLQCSTEKQQMEDVGNQFVKIFWMNSFFQDADGEYGEIISFKMHDLMHDLAMLVAGSDYCYLDSKAEKVEGRPMHVSLESDEAFHLLKSLDPSRLRTLIFPYYFEEEVDLSVIAKFKYLRVLRMDCLSDSTEHSKHLRYLDLLQQTSLPKSMSNLVFLQTLKSWECDEESFSEVVTKLVNLRCLEIAEYESMSGMAGLGKLSSLQFLSTFVVGDSQEIKYGTLNELKDLNLIRGKLEIKCLNRVRDVALESQNVNLKEKKFLQSLTLNWSLFGDLFNSDSLQLLENLEPHLNLKQLEVNYYPGVLLPNWLSLLTNVVDITLWGFDNCRCLPPLKRLPSLKSLAIHTLNELEYIDLYEDGFAVTFFPSLESLILDNCPKLRGWRRRGDDINDSHNLSLPLSFPHLSQLFVSKCPQLTCMPTFPNVKDLNWCHSNAEPLTGTLNSTCSADSSSSAAPLSVLKELQISDPMNLPKGWMQNLTSLESLKIQSRESETLEEFEMGFKDDTDCLPCLRKIGIWECERLKALPDWICNLSALQHIMIYGCPKLASLPKGMRGLTNLKMFEVRKCSLLLEECRTETSAVSRQIAHIPQKILRD* 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0202 1041 Gene3D Ribonuclease Inhibitor 534 870 IPR032675 -
Apr10g0202 1041 SUPERFAMILY RNI-like 839 1015 - -
Apr10g0202 1041 Gene3D Ribonuclease Inhibitor 871 1033 IPR032675 -
Apr10g0202 1041 PRINTS Disease resistance protein signature 190 205 - -
Apr10g0202 1041 PRINTS Disease resistance protein signature 264 278 - -
Apr10g0202 1041 PRINTS Disease resistance protein signature 361 375 - -
Apr10g0202 1041 PRINTS Disease resistance protein signature 1000 1016 - -
Apr10g0202 1041 SUPERFAMILY L domain-like 488 873 - -
Apr10g0202 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 424 IPR027417 -
Apr10g0202 1041 PANTHER OS05G0414200 PROTEIN 31 935 - -
Apr10g0202 1041 Gene3D - 410 498 IPR036388 -
Apr10g0202 1041 Gene3D - 324 409 IPR042197 -
Apr10g0202 1041 Coils Coil 26 53 - -
Apr10g0202 1041 Pfam Rx N-terminal domain 22 93 IPR041118 -
Apr10g0202 1041 Gene3D - 13 113 - -
Apr10g0202 1041 PANTHER DISEASE RESISTANCE PROTEIN RP 31 935 IPR044974 GO:0006952
Apr10g0202 1041 Pfam NB-ARC domain 169 411 IPR002182 GO:0043531
Apr10g0202 1041 Gene3D - 149 320 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0202 Apr-Chr10 4696468 4699593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0202 188 379 WRKY Transcription Factor Family AT5G45050 27.184 5.05e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0202 - - aprc:113850108 1437.94