Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0198 ATGGCTGATTCAGTTCCATTTGCTGTTACTTCAAATCTCAGGTTGGCTTCCGCAGATTTTCTTGAATTTGGAAAGCATTATGATGTGACGGAAGAGTTGGAAGAGCTTAAGAACACTATTGAATCCATCAATGCTAAGCTCCTTGATGCCGACGATAAACAAGATCAAGATGATGGTGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTCCATATTGCAGATGACTCCTTAGATGAGCTTGCTATCCAATTCAGGAGAGACAAACTGGATGCAGCAGAAGGAAAAGAAGTAGACAACGTACTTCTTTCCATTTCATCTTCAAATCAACTTCCTTTGTACACTGAAATGCCTGACAAAATTAAAGAAATACGAGAAAGTTTTAATGGTGTAGTAGAAGACATGGATAAATTGAATTTAAGCCCAGGTTCTCTGGTTAAGCAAACTAGCAGTGAATGGAGGGAAACATGTTCTTTTGTGCTAGAATCTGATATCATTGGAAGAGATGACAGTAAAAAGGAGATTATTAATCTGTTGAGACAACCTCATGAAAACAGAAAAGTTTCTGTGATTGCTATTGTTGGCCTCGGTGGCTTGGGGAAGACAGCTCTTGCACAATTGGTGTATAATGACTTGGAAGTGCAGACTTTTTTTAATATGCAAATATGGGTGTGTGTCTCTGATAACTTTGACGTTAAAACTATTCTGAAGAAAATATTAGAATCAATTACTGATGGCCAAAGACAAGACCAATCATTAGAGAAGTTGCAAAAAGAGCTTCGTGAAAGTTTAAGTGGTAAGAAGTATTTGTTGGTCTTGGATGACATTTGGAATGATAGTCATGACAAATGGGTTGAATTGAGAAAGTACTTGATGTGTGGCGGTCAAGATAGTAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAAAGCAATAACTGCTAGGGCTTCCTATTCTTTGAAAGGTTTGACTGATGAAGCATCTTGGAGTTTGTTAAAGAGCATTGCATTTGAGGATGATTTCAAAGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTAGCAGTTAAAACCCTGGGAGGCCTGTTAAGAAGACAAAACGAAGAAAGTGAATGGGAGAATGTTTTACTTGGTGACTTCTGGAAATTATGTGAAGAGCAAAATAGTATTATGCCAATTTTAAAACTCAGTTACCGCATCTTGTCACCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTACCCCAAGGATTCAAAAATTCCAAAGGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACCTTAAATGTTCGACTGAAAAGCAGCACGTGGAGGATGTCGGTAATCAATTTGTAAAGATATTTTTGATGAACTCAATTTTTCAAGATCCAAAAAGTGGTGAATATGGTGAGATCATTAGTTTCAAAATGCACGACTTAATGCATGATCTTGCAATGCTAGTAGCTGGCAGTGATTATTGTTACTTGGATAGTAAGGCAGGAAAAGTCGAAGGTAGACCCATGCACGTATCATTGGAATCTTATGAGGCCATTCATTTGTTGAAATCATCAGATACGAGCAGGCTGCGAACTTTGATTCTGCGGTATTCCTTGAAAAAGGAGGAAGATTTTTCGGTTATTGCAGAGTTCAAATACTTACGTGTCTTGAGGATGCATCATCACTCTGATTCCACTGAACATTGGAAGCATTTAAGATACCTTGATTTAACGTACCAAACAAGTCTTCCCAAATCTATGAGCAATCTTGTTTTCCTACAAACATTAAAATTGTGGAAGTGCGATGAAGAATCATTTTCAGAAGTAGTCACAAAATTAGTCAATTTGAGGTGCCTTGACATTGCTGATTATCACTCCATGATGAGTGGGATGGCAGTTGGGTTGGGAAAATTATCCTCATTGCAATTATTATCCACCTTTGTTGTGGGAGACAGCCAAGAAATAAAATATGGCACACTAAATGAACTCAAGGACTTAAACCTAATAAGAGGCAAATTAGAAATTAAGCATCTCAATCGTGTCAGAGAAGTGGCTCTGGAATCTCATGACGTATATTTAAAAGAAAAAAATTTCCTTGGATCCTTGACTCTGGATTGGTCGCGTGATGACCTCCGTAACAGTGACAGCTTGCAATTATTGGAAAACCTTCAACCCCACCGTAATCTTAAGCGTTTGGAGGTGTTTTATTATCCAGGCGTGCTTTTCCCAAATTGGCTTTCTCTCCTCACAAATGTTGTTGACATTCGTCTCTATGAGCTTCGTAAATGCCGCTATCTCCCATCGTTGGAACGTCTCCCTTACCTGAAGTCACTTGATATAAAGTCTCTTGATGAATTGGAATACATATATCTCTACGAAGATGGTTTTGCAGTAACCTTCTTCCCCTCTATGGAGAGCCTCTTGTTACATGATTGTCCCAAGCTCAGGGGATGGCGGAGGCGGGGAGATGATATCAATGATTCACATAATCTCTCTTCATCTCTTAATTTCCTCATCTTTCTCATCTGCAACTCTATCTCTGTCCACAGTTGA 2586 0.3852 MADSVPFAVTSNLRLASADFLEFGKHYDVTEELEELKNTIESINAKLLDADDKQDQDDGVRVWIRRFKKVLHIADDSLDELAIQFRRDKLDAAEGKEVDNVLLSISSSNQLPLYTEMPDKIKEIRESFNGVVEDMDKLNLSPGSLVKQTSSEWRETCSFVLESDIIGRDDSKKEIINLLRQPHENRKVSVIAIVGLGGLGKTALAQLVYNDLEVQTFFNMQIWVCVSDNFDVKTILKKILESITDGQRQDQSLEKLQKELRESLSGKKYLLVLDDIWNDSHDKWVELRKYLMCGGQDSKILVTTRSENVAKAITARASYSLKGLTDEASWSLLKSIAFEDDFKGVNQNLESMGKEIAKKCKGVPLAVKTLGGLLRRQNEESEWENVLLGDFWKLCEEQNSIMPILKLSYRILSPEMRQCFAYCSLYPKDSKIPKDELIQLWMAQGYLKCSTEKQHVEDVGNQFVKIFLMNSIFQDPKSGEYGEIISFKMHDLMHDLAMLVAGSDYCYLDSKAGKVEGRPMHVSLESYEAIHLLKSSDTSRLRTLILRYSLKKEEDFSVIAEFKYLRVLRMHHHSDSTEHWKHLRYLDLTYQTSLPKSMSNLVFLQTLKLWKCDEESFSEVVTKLVNLRCLDIADYHSMMSGMAVGLGKLSSLQLLSTFVVGDSQEIKYGTLNELKDLNLIRGKLEIKHLNRVREVALESHDVYLKEKNFLGSLTLDWSRDDLRNSDSLQLLENLQPHRNLKRLEVFYYPGVLFPNWLSLLTNVVDIRLYELRKCRYLPSLERLPYLKSLDIKSLDELEYIYLYEDGFAVTFFPSMESLLLHDCPKLRGWRRRGDDINDSHNLSSSLNFLIFLICNSISVHS* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0198 861 SUPERFAMILY L domain-like 488 844 - -
Apr10g0198 861 Pfam Rx N-terminal domain 22 93 IPR041118 -
Apr10g0198 861 Gene3D - 323 408 IPR042197 -
Apr10g0198 861 Gene3D - 13 136 - -
Apr10g0198 861 Pfam NB-ARC domain 169 409 IPR002182 GO:0043531
Apr10g0198 861 Gene3D - 150 319 IPR027417 -
Apr10g0198 861 PANTHER DISEASE RESISTANCE PROTEIN RP 30 831 IPR044974 GO:0006952
Apr10g0198 861 Gene3D Ribonuclease Inhibitor 525 845 IPR032675 -
Apr10g0198 861 Coils Coil 26 53 - -
Apr10g0198 861 Gene3D - 409 498 IPR036388 -
Apr10g0198 861 PRINTS Disease resistance protein signature 190 205 - -
Apr10g0198 861 PRINTS Disease resistance protein signature 263 277 - -
Apr10g0198 861 PRINTS Disease resistance protein signature 360 374 - -
Apr10g0198 861 PRINTS Disease resistance protein signature 781 797 - -
Apr10g0198 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 423 IPR027417 -
Apr10g0198 861 PANTHER OS05G0414200 PROTEIN 30 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0198 Apr-Chr10 4613808 4616393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0198 188 447 WRKY Transcription Factor Family AT5G45050 23.656 4.26e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0198 - - aprc:113850108 1166.37