Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0197 ATGGCTGATTCAGTTCCATTTGCTGTTACTTCAAATCTCAGGTTGGCTTCCGCAGATTTTCTTGAATTTGGAAAGCAATATGATGTGACGGAAGAGTTGGAAGATCTTAAGAACACTGTTGAATCCATCAATGCTAAGCTCCTTGATGCAGACGATAAACAAGATCAAGATGATGGTGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTCCATGCTGCAGATGACTCCTTAGATGACCTTGCTATCCAATTCAGGAGAGACAAATTGGGTGCAGCAGAAGGAAAAGAAGTAGACAAGGTACTTCTTTCCATTTCATCTTCCAATCAAATTCCTTTATACAGTGAAATGTCTGACAAAATTAAAGAAATACTAGAAAGTTTTAATGGTGTGGTAAAGGAAATGAAGGATTTGAATTTAAGCCCAACATCAGCAGTGGTTAAGCAAACTAACAGTGAATGGAGGGAAACATGTTCTTTTGTGCTAGAATCTGATATCATTGGAAGAGATGATAGTAAAAAGGAGATTATTAGTCTGTTGAGACAACCTCATGAAAACCGAAAAGTTTCTGTGATTGCTATTGTTGGCCTCGGTGGCTTGGGGAAGACAACGCTTGCTCAGTTCGTGTATAATGACTTGGAAGTGCAGAATTTTTTTGAAATGCAAATATGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAGATATTAGAATCAATTACTGGTAACCAAGTTGAAGACAAGTTATCATTAGGCAACTTGCAAAGAAAACTTCATGAAGAAGTAAGAGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAGACGTGACAAATGGATTGAATTGAGAAAGTACTTGATGTGTGGCGCTCAAGATAGTAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAGAGGCAATGACTGCCAGCACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGCATCTTGGACTTTGTTGAAGAGCATTGCATTTGAGGATGATTTCAAAGGAGTGAATCAAAATCTAGAATCAGTGGGGAAAGAAATAGCCAAAAAATGTAGAGGGGTTCCACTGGCAGTTAAAACCTTGGGAGGCCTGTTACGAGGACAAAACGAAGAAAGTGAATGGGAGAATGTTTTACGTGGTGACTTCTGGAAATTATGTGAAGAGCAAAATAGTATTATGCCAATTCTAAAACTCAGTTACCGCAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTATACCCCAAGGATTCAGAAATTCCGAAGGATGAGTTGATTCAGTTATGGATGGCACATGGTTACCTTAAATGTTCAACCGAAAAACAGCCCATGGAGGATGTGGGTAACCAATTTGTAAAGATGTTTTTGATGAAGTCACTTTTTCAAGATGCGTATAGTGAATACGGTGAAATCATTAGCTTCAAAATGCACGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTATTGTTACTTGGATAGTAAGGCAGAAAAAGTTGAAGGTAGACCCATGCACGTATCATTGAAATACAATGCCATTCATTTGTTGAAATCATTAGATCCCACCAGGCTGCGATCTTTGATTTTGCCATATTCCTACCCAAAGGAGGAATATTTGTCGGTTATTGCAAAGTTCAAATACTTACGTGTCTTGAGGACGCATCATCTCTCTGATTCCACTGAACATTTGAAGCATTTAAGATACCTTGCTTTAATGCAACAAACAAGTCTTCCCAAATCTCTGAGCACTCTTGTTTTCCTACAAACATTAAAGCTGATGGCATTCGATGAAGAATCATTTTCAGAAGTAGTCACAAAGTCAGTCAATCTGAGGTTCCTTTATATCACTAAACCCATGAGTGGGATGGCAGTTGGGTTGGGAAAATTATGCTCTCTGCAATTCTTATCGGCCTTTTATGTAGGAGATAGCCAAGAAAAAAAATATGCTACATTAAATGAACTGAATGACTTAAACCTATTAAGAGGCGAATTAAAAATTGAGCATCTGAATCGTGTGAGAGACGTGGCTCTAGAATCACAGTATGTAAATTTAAAAGAAAAAAGATTCCTTCAATCCTTGACTCTGGATTGGTCGACTGAAGACCTCTGTAACAGTGAGAGCTTACAGTTATCGGAAAACCTTCAACCCCACCGTAATCTTAAGCGTTTGGAGGTGAATCATTATCCAGGCGTGCTTTTCCCAAATTGGCTTTCTCTCCTCACAAATGTTGTTTACATCACTCTCTCTAGGTTTGGTAATTGTCGCTGTCTCCCACCGTTGGAACGTCTCCCGTCCCTGAAGTCACTTCTGATGTACGGTCTTTATGAATTGGAATACATAGATCTCTACGAAGATGGTTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAACCTCACGTTAAATAATTGTCCGAAGCTTATGGGATGGCGGAGGCGGGGAGATGATATCAATGATTCACATAATCTCTCCTTACCTCTTTCTTTTCCTCATCTTTCTCAACTGGAAGTCTGTGTATGTCCACAGTTGACTTGCATGCCTACTTTTCCAAATTCTTCCTCCGCTGCTCCTCTTTCCATGCTCAAAGAATTAGACATATCAGATCCTATGAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTTCAAATTGAATGGTGTTACAGTGAAACACTTAGGGAATTTGAAACTGGGTTTAAGGACGACACCAACTGCCTTCCTTCTCTGCGACAAATCAAAATAGGTTGGTGTATGCGGCTGAAGGCTTTGCCTGATTGGATTTGCAACCTCTCATCGCTTCAGCACATCAAGATCCGCACTTGCCCATATTTGGCATCGCTGCCCGAAGGAATGAGTGGTCTTACCAACTTAAAGATCTTTGAGGTTGAGAATTGTTCCCTCTTACTTGAAGAATGCCGAACAGAGACAAGTGTTGTTAGTCGCCAAATTGCACACATCTCTCAAATTATCCTTGATGATAGCTGGTAA 3048 0.3957 MADSVPFAVTSNLRLASADFLEFGKQYDVTEELEDLKNTVESINAKLLDADDKQDQDDGVRVWIRRFKKVLHAADDSLDDLAIQFRRDKLGAAEGKEVDKVLLSISSSNQIPLYSEMSDKIKEILESFNGVVKEMKDLNLSPTSAVVKQTNSEWRETCSFVLESDIIGRDDSKKEIISLLRQPHENRKVSVIAIVGLGGLGKTTLAQFVYNDLEVQNFFEMQIWVCVSDNFDVKTILKKILESITGNQVEDKLSLGNLQRKLHEEVRGKKYLLVLDDIWNERRDKWIELRKYLMCGAQDSKILVTTRSENVAEAMTASTSYPLKGLTDEASWTLLKSIAFEDDFKGVNQNLESVGKEIAKKCRGVPLAVKTLGGLLRGQNEESEWENVLRGDFWKLCEEQNSIMPILKLSYRNLSPEMRQCFAYCSLYPKDSEIPKDELIQLWMAHGYLKCSTEKQPMEDVGNQFVKMFLMKSLFQDAYSEYGEIISFKMHDLMHDLAMLVAGNDYCYLDSKAEKVEGRPMHVSLKYNAIHLLKSLDPTRLRSLILPYSYPKEEYLSVIAKFKYLRVLRTHHLSDSTEHLKHLRYLALMQQTSLPKSLSTLVFLQTLKLMAFDEESFSEVVTKSVNLRFLYITKPMSGMAVGLGKLCSLQFLSAFYVGDSQEKKYATLNELNDLNLLRGELKIEHLNRVRDVALESQYVNLKEKRFLQSLTLDWSTEDLCNSESLQLSENLQPHRNLKRLEVNHYPGVLFPNWLSLLTNVVYITLSRFGNCRCLPPLERLPSLKSLLMYGLYELEYIDLYEDGFAVTFFPSLENLTLNNCPKLMGWRRRGDDINDSHNLSLPLSFPHLSQLEVCVCPQLTCMPTFPNSSSAAPLSMLKELDISDPMNLPKGWMQNLTSLESLQIEWCYSETLREFETGFKDDTNCLPSLRQIKIGWCMRLKALPDWICNLSSLQHIKIRTCPYLASLPEGMSGLTNLKIFEVENCSLLLEECRTETSVVSRQIAHISQIILDDSW* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0197 1015 Gene3D Ribonuclease Inhibitor 521 831 IPR032675 -
Apr10g0197 1015 SUPERFAMILY L domain-like 478 995 - -
Apr10g0197 1015 Coils Coil 33 53 - -
Apr10g0197 1015 Gene3D - 325 410 IPR042197 -
Apr10g0197 1015 Gene3D Ribonuclease Inhibitor 832 1003 IPR032675 -
Apr10g0197 1015 Gene3D - 149 321 IPR027417 -
Apr10g0197 1015 Pfam Rx N-terminal domain 22 93 IPR041118 -
Apr10g0197 1015 Gene3D - 13 137 - -
Apr10g0197 1015 Pfam NB-ARC domain 170 412 IPR002182 GO:0043531
Apr10g0197 1015 PRINTS Disease resistance protein signature 191 206 - -
Apr10g0197 1015 PRINTS Disease resistance protein signature 265 279 - -
Apr10g0197 1015 PRINTS Disease resistance protein signature 362 376 - -
Apr10g0197 1015 PRINTS Disease resistance protein signature 872 888 - -
Apr10g0197 1015 Gene3D - 411 499 IPR036388 -
Apr10g0197 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 425 IPR027417 -
Apr10g0197 1015 PANTHER DISEASE RESISTANCE PROTEIN RP 30 908 IPR044974 GO:0006952
Apr10g0197 1015 PANTHER OS05G0414200 PROTEIN 30 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0197 Apr-Chr10 4576783 4579917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0197 189 449 WRKY Transcription Factor Family AT5G45050 25.373 9.66e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0197 - - aprc:113851568 1408.66