Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0196 ATGGTTCTGAGTAACCGGGTTTTGAGTTCTCGAATTCTTGTGAATTTCTTGCTGCTGATTAGTTGTGGCATGACCTTTGGGACTGTAACTGATGTCTTCTGCTTGAAAAAAATCAGAGAGTCCCTTCAGGATCCCAATAACTATTTAAACTCTTCTTGGAATTTCGACAACAAAACTGAGGGGTTTATCTGCAACTTTAATGGGGTTGAGTGTTGGCACCCTGATGAGAATAGAGTCTTGAATCTCAAACTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTTTCATTCGAAATTGCTCCAGCTTAACTGGATTAGACCTTTCCATGAACAAACTCTCTGGAAGCATTCCAGGAGATATATCGGATCTTATACAGTATGTGACATCTCTTGATCTATCTTCAAATGAATTTTCTGGGGAAATACCTGTGAGTCTTGCGAATTGTACCTTTCTTAATACCCTTAAACTTGATCAGAATCAACTCACTGGTCAAATCCCTCAACAATTTAGCGCTCTCGCACGACTGAAGGAATTTTCTGTATCCAACAATCTTTTGACAGGTCCAGTTCCTGGCTTTAACAAAAGTCAAGTTACGGTGTTGAGTTATGCAAATAATCAAGGCCTATGTGGAGATTCATTGCCGTCATGCCAGACAAAGTCTTCCAAGAGTAACACTGCTGTTATTGCTGGTGCTGCTGTTGGTGGGGTGACACTTGCTGCATTAGGATTGGGTGTTTTAATGTTCTTCTTTGTGCGACGTGTTTCTTTCAAGAAGGAAGAGGACCCCGAAGGAAACAAATGGGCAAGGAGTATAAAAGGAACTAAAACAATTAAGGTTTCCATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAACACCAATATCATTGGGAAAGGAAGTACAGGAACAGTTTACAGAGCTGTTCTTGATGATGGCACAACACTTATGGTTAAGAGACTGCAGCAATCTCAGCACTCTGAGAAAGAATTTATGTCTGAGATGGGTACACTGGGGACTGTTAGACATCGTAACCTTGTTCCTCTTTTAGGTTTCTGCATGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCTATGATCAACTACATCCTGCAGATGGTGGGAGCACTCTCGACTGGCCCATGAGGCTCAAAATTGCACTTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCGCAAAGTGCATCTTGTTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAGACTGATGAACCCAATTGATACTCATTTGAGTACTTTCGTAAATGGCGAGTTTGGGGATTTTGGATATGTTGCTCCTGAATACACTAAAACTTTGGTTGCTACCCCGAAGGGGGATATTTATAGCTTTGGAACTGTGCTTCTTGAGTTGGTGACTAGTGAAAGACCTACCAATGTGGCTAAAGCTCCAGAAACTTTTAAAGGAAATCTAGTAGAATGGATTACGGAGCTCTCAAGTAAGTCACAACTCCAGGATGCCATTGATGAATCACTAGTTGGCAAGGGTGATGATACCGAGCTTTTCCAATTTTTAAAGGTTGCATGCAACTGTGTTGTACCAACTCCTAAGGAGAGGCCCACCATGTTTGAAGTATATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATATAATAACTGAGGATGACTTGTTGTTACCTACAGATATTGGTGATACTGAAAACTTGGGGGAACTTATTGTAGCTCGAGAAGGAAATATATGA 1845 0.413 MVLSNRVLSSRILVNFLLLISCGMTFGTVTDVFCLKKIRESLQDPNNYLNSSWNFDNKTEGFICNFNGVECWHPDENRVLNLKLSNMGLKGQFPRFIRNCSSLTGLDLSMNKLSGSIPGDISDLIQYVTSLDLSSNEFSGEIPVSLANCTFLNTLKLDQNQLTGQIPQQFSALARLKEFSVSNNLLTGPVPGFNKSQVTVLSYANNQGLCGDSLPSCQTKSSKSNTAVIAGAAVGGVTLAALGLGVLMFFFVRRVSFKKEEDPEGNKWARSIKGTKTIKVSMFEKSISKMKLSDLMKATNNFSNTNIIGKGSTGTVYRAVLDDGTTLMVKRLQQSQHSEKEFMSEMGTLGTVRHRNLVPLLGFCMAKKERLLVYKNMPNGNLYDQLHPADGGSTLDWPMRLKIALGAAKGLAWLHHSCNPRIIHRNISAKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYTKTLVATPKGDIYSFGTVLLELVTSERPTNVAKAPETFKGNLVEWITELSSKSQLQDAIDESLVGKGDDTELFQFLKVACNCVVPTPKERPTMFEVYQLLRAIGGRYNIITEDDLLLPTDIGDTENLGELIVAREGNI* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0196 614 Gene3D Transferase(Phosphotransferase) domain 1 377 589 - -
Apr10g0196 614 CDD STKc_IRAK 308 576 - -
Apr10g0196 614 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Apr10g0196 614 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0196 614 SUPERFAMILY L domain-like 30 209 - -
Apr10g0196 614 Pfam Protein tyrosine and serine/threonine kinase 305 574 IPR001245 GO:0004672|GO:0006468
Apr10g0196 614 PANTHER LRR RECEPTOR-LIKE KINASE 6 591 - -
Apr10g0196 614 Gene3D Ribonuclease Inhibitor 30 219 IPR032675 -
Apr10g0196 614 SUPERFAMILY Protein kinase-like (PK-like) 278 576 IPR011009 -
Apr10g0196 614 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Apr10g0196 614 PANTHER RECEPTOR-LIKE PROTEIN 55 6 591 - -
Apr10g0196 614 Gene3D Phosphorylase Kinase; domain 1 263 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0196 Apr-Chr10 4561735 4564985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0196 31 590 Receptor kinase-like Gene Family AT3G28450 47.359 5.75e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Apr10g0196 PK_Tyr_Ser-Thr 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0196 - - gmx:100817267 902.894