Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0185 ATGGAAAACGTTCCATTTGCTGTTGCGTCTAATCTCATTCACAGGTTGGCTTCCGCAGATTTTCTTGAATTTGGAAAGCAATATGATGTGACAGAAGAGTTGGAAGATCTTAAGAACACTATTGAATCCATCAATGCTAAGCTCCTTGATGCAGATGATAAACAAGATCAAGATGATGGTGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTCCATGCTGCAGATGACTCCATAGATGAGCTTGCTATCCAATTCAGGAGAGACAAATTGGGTGCAGCAGAAGGAAAAGAAGTAGACAAGGTACTTCTTTCCATTTCATCTTCCAATCAAATTCCTTTATACAGTGAAATGCCTGACAAAATTAAAGAAATACGAGAATGTTTGAACGATGTAGTAAAAGAAATGAAGGATTTGAATTTAAGTCCAAGATCAGGGGTGGTTAAGCAAACTAACAGTGAATGGAGGGAAACATGTTCTTTTGTGCTAGAATCTGATATCATTGGAAGAGATGATAGTAAAAAGGAGATTATTAGTCTGTTGAGACAGCCTCATGAAAACCGAAAAGTTTCTGTGATTGCTATTGTTGGCCTCGGTGGCTTGGGGAAGACAACGCTTGCTCAGTTGGTGTATAATGACTTTGAAGTGCAGAATTTTTTTGAAATGCAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTATTCTGAAGAAAATATTAGAATCAATTACGGGTGACCAAATGGAAGAAAAGTTATCATTAGGCAATTTGCAAAGAAAACTTCATGAAAAAATAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATTTGGAATGAGAAACGTGACAAATGGACTGAATTGAGAAAGTTCTTGATGTGTGGCGCTCAAGATAGTAAGATTTTAGTGACAACTCGAAGTGAAAATGTAGCAAAGGCAATGACTGCCAACACTTCCTATCCTTTGAAAGGTTTGACTGATGAAGCATCTTGGAGTTTGTTGAAGAACATTGCATTTGAGGATGATTTCAAAGGAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTGGCAGTTAAAACCCTGGGAGGCCTGTTAGGAGGACAAAACGAAGAAAGTGTATGGGAGAATGTTTTACGTGGTGACTTCTGGAAATCATGTGAAGAGCAAGATAGTATCATGCCAATTCTAAAACTCAGTTACCGCAACTTGTCGCCAGAAATGAGACAATGTTTTGCTTATTGCTCTTTGTACCCCAAGGATTCAAAAATTCGAAAAGATGAGTTGATTCAGTTATGGATGGCACAGGGTTACGTTAAATGTTCGACTGAAGAGCACATGGAGGATGTTGGTAATCAATTTGTAAAGATGTTTCTGATGAACTCATTTTTTCAAGATGCAGAAAATGATGAATACCATGAGATCATTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCGATGCTTGTTGCGGGCAATGATTATTGTTACTTGGATAGTAAGGCAGAAAAAGTTGAAGGTAGACCCATGCACGTATCATTGGAATCTGATGAGGCCATTCATTTGTTGAAATCATTAGATCCGAGCAGGCTGCGAACTTTGATTTTCCCGGATGACTTGGAAGAGGAGGAAGATTTGTCGGTTATTGCAGAGTTCAAATACTTACGTGTCTTGAGGATGGATCAAATCTCTGATTCCACTGAACATTTGAAGCATTTAAGGTACCTTGATTTAACGCAACAAACAAGTCTTCCCAAATCCATGAGCAATCTTGTTTTCCTACAAACATTAAAATTAAAGAAGTGCGACGAAGAATCATTTTCAGAAGTAGTCACAAAATTAGTCAATTTGAGGTGCCTTGATATTGCTTATTATCACTCCATGATGAGTGGGATACCAGTTGGGTTGGGAAAATTATGCTCATTGCAATTCTTATCGACATTTGTTGTGGGAGACAGCCAAGAAATAAAATATGGGGCACTAAATGAACTGAAGGACTTAAACCTAATAAGAGGCAAATTAAAAATTAAGTATCTCAATCGTGTGAGAGACGTGGCTCTGGAATCACAGCACGTTAATTTAAAAGAAAAAAAATTCCTTCAATCCTTGACCCTGAGTTGGTTGGATGGTTGGTGGGAAGATTGGTCGCATGGATACCTCCGTAACAGTGACAACTTACAATTATTGGAAAACCTTCAGCCCCACCGCAATCTCAAGCGATTGGAGGTGTTTTATTATCCAGGCGTGCTTTTCCCAAATTGGCTTTCTCTCCTCACAAATGTGGTTCACATTCGTCTCTATGAGCTTCGTAAATGCTGCTATCTCCCACCGTTGGAACATCTCCCTTACTTGAAGTCACTTATGATGCACTCTCTCTATGAATTGGAATACATATATCTCGATGGTTTTGCAGTAACCTTCTTCCCCTCTTTGGAGAGCCTCGAATTAATTACTTGTCCCAAGCTCAGGGGATGGCGGAGGCGGGGAGATGATATCAGTGATTCACATAATCTCTCCTCTTCTCTTTCATTTCCTCATCTTTCTCAACTGTATGTTTTAGTCTGTCCACGGTTGAATTGCATGCCTACTTTTCCAAACGCTAAGGATTTAGGATGGCTTGAATGCAGTGCAGAACCATTAATAGGAACACTGAACACAACAGAGTCAACACGTTCAGCTGACTCATCTTCCTCTGCTGCTCCTCTTTCCATGCTCAAACAATTGGCGATTTCTTATGATATGAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTCTAGAGTCTCTTCAAATTCAATTTGGTGAAAGTGAAACACTTGAGGAATTTGAAACTGGGTTTAAGGACGGCACCAACTGCCTCCCTTCTCTGCGAAAAATCGCCATAGATCATTGTGGAAGGCTGAAGGGTTTGCCAAATTGGATTTGCAACCTCTCATGGCTTCAGCACATCATGATCTTCTATTGCCCAAAATTGGCATCGCTGCCCGAAGGAATAAGTGGTCTTACCAACTTAAAGATCTTTGAGGTCAGAGGATGTTCCCTCTTACTTAAAGAATGCCGAACAGAGACAAGTGTTGTTAGTCGCCAAATCGCACACATCGCACAGATAATCCTTGATGATTAG 3162 0.395 MENVPFAVASNLIHRLASADFLEFGKQYDVTEELEDLKNTIESINAKLLDADDKQDQDDGVRVWIRRFKKVLHAADDSIDELAIQFRRDKLGAAEGKEVDKVLLSISSSNQIPLYSEMPDKIKEIRECLNDVVKEMKDLNLSPRSGVVKQTNSEWRETCSFVLESDIIGRDDSKKEIISLLRQPHENRKVSVIAIVGLGGLGKTTLAQLVYNDFEVQNFFEMQMWVCVSDNFDVKTILKKILESITGDQMEEKLSLGNLQRKLHEKISGKKYLLVLDDIWNEKRDKWTELRKFLMCGAQDSKILVTTRSENVAKAMTANTSYPLKGLTDEASWSLLKNIAFEDDFKGVNQNLESMGKEIAKKCKGVPLAVKTLGGLLGGQNEESVWENVLRGDFWKSCEEQDSIMPILKLSYRNLSPEMRQCFAYCSLYPKDSKIRKDELIQLWMAQGYVKCSTEEHMEDVGNQFVKMFLMNSFFQDAENDEYHEIISFKMHDLMHDLAMLVAGNDYCYLDSKAEKVEGRPMHVSLESDEAIHLLKSLDPSRLRTLIFPDDLEEEEDLSVIAEFKYLRVLRMDQISDSTEHLKHLRYLDLTQQTSLPKSMSNLVFLQTLKLKKCDEESFSEVVTKLVNLRCLDIAYYHSMMSGIPVGLGKLCSLQFLSTFVVGDSQEIKYGALNELKDLNLIRGKLKIKYLNRVRDVALESQHVNLKEKKFLQSLTLSWLDGWWEDWSHGYLRNSDNLQLLENLQPHRNLKRLEVFYYPGVLFPNWLSLLTNVVHIRLYELRKCCYLPPLEHLPYLKSLMMHSLYELEYIYLDGFAVTFFPSLESLELITCPKLRGWRRRGDDISDSHNLSSSLSFPHLSQLYVLVCPRLNCMPTFPNAKDLGWLECSAEPLIGTLNTTESTRSADSSSSAAPLSMLKQLAISYDMNLPKGWMQNLTSLESLQIQFGESETLEEFETGFKDGTNCLPSLRKIAIDHCGRLKGLPNWICNLSWLQHIMIFYCPKLASLPEGISGLTNLKIFEVRGCSLLLKECRTETSVVSRQIAHIAQIILDD* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0185 1053 Pfam Rx N-terminal domain 10 97 IPR041118 -
Apr10g0185 1053 Gene3D Ribonuclease Inhibitor 532 879 IPR032675 -
Apr10g0185 1053 Gene3D Ribonuclease Inhibitor 880 1043 IPR032675 -
Apr10g0185 1053 PANTHER DISEASE RESISTANCE PROTEIN RP 31 944 IPR044974 GO:0006952
Apr10g0185 1053 Gene3D - 412 500 IPR036388 -
Apr10g0185 1053 PRINTS Disease resistance protein signature 192 207 - -
Apr10g0185 1053 PRINTS Disease resistance protein signature 266 280 - -
Apr10g0185 1053 PRINTS Disease resistance protein signature 363 377 - -
Apr10g0185 1053 PRINTS Disease resistance protein signature 580 596 - -
Apr10g0185 1053 Pfam NB-ARC domain 171 413 IPR002182 GO:0043531
Apr10g0185 1053 Gene3D - 151 322 IPR027417 -
Apr10g0185 1053 PANTHER OS05G0414200 PROTEIN 31 944 - -
Apr10g0185 1053 Gene3D - 326 411 IPR042197 -
Apr10g0185 1053 Gene3D - 9 113 - -
Apr10g0185 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 426 IPR027417 -
Apr10g0185 1053 Coils Coil 34 54 - -
Apr10g0185 1053 SUPERFAMILY L domain-like 476 1033 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0185 Apr-Chr10 4370301 4377188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0185 190 380 WRKY Transcription Factor Family AT5G45050 26.904 3.89e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0185 - - aprc:113850108 1399.42