Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0183 ATGGCCGAGTCAGTTCCATTTGCTGTTAATTCAAATCTCAGGTTGGCTTCCGCAGATTTTCTTGAATTTGGAAAGCATTATGAAGTGACGGAAGAGTTGGAAGAGCTCAAGAACACTATTGAATCCATCAATGCTAAGCTCCTTGGTGCCGACGATAAACAAGATCAAGATGATGGTGTGCGAGTTTGGATCAGAAGGTTCAAAAAAGTACTCCATGCTACAGATGACTCCTTAGATGATCTTGCTATCCAATTCAGGAGAGACAAATTGGGTGCAGCAGAAGGAAAAGAAGTAGACAAGGTACTTCTTTCCATTTCATCTTCAAATCAACTACCTTTATACACTGAAATGCCTGACAAAATTAAAGAAATACGAGAAAGTTTTAATGGTGTAGTAGAAGACATGGATAAATTGAATTTAATCCCAGCTTCTCTGGTTAAGCAAACTAACAGTGAATGGAGGGAAACATGTTCTTTTGTGCTAGAATCTGATATCATTGGAAGAGATGATAGTAAAAAGGAGATTATTAGTCTGTTGGGACAAACTCATGAAAACAGAAAAGTTTCTCTGATTGCTATTTTTGGCCTCGGTGGCTTGGGGAAGACAACGCTTGCTCAGTTGGTGTATAATGACTTGGAAGTGCAGAATTGTTTTGAAAAGAAAATGTGGGTGTGTGTCTCTGATAACTTTGATGTGAAAACTGTTCTGAAGAAAATATTAGAATCAGTTACTCGTTCCAAGACAGCAGATGGGTCGTCGTTAGACTACTTGCAAGAAAAACTTCGTGAAAATTTAAGTGGTAAGAAATATTTGTTGGTCCTGGATGACATATGGAATGAGAGACGTGACAAATGGATTGAATTGAGAAAGTACTTGATGTGTGGCGCTCAAGATAGTAAGATTTTAGTAACAACTCGAAGTGAAAATGTAGCAAAGGCAATGTCTGCCAGCACTTCGTATCCTTTGAAAGGTTTGACTGATGAAGCATCTTGGAGTTTGTTGAAGAGCATTGCATTTGAGGATGATTTCACAGAAGTGAATCAAAATCTAGAATCAATGGGGAAAGAAATAGCCAAAAAATGTAAAGGGGTTCCACTGGCAGTTAAAACCCTGGGAGGCCTCTTAGGAGGACAAAACGAAGAAAGTGAATGGGAGAATGTTTTACTTGGTGACTTTTGGAAATTATGTGAAAAGCAAAATAGTATTATGCCAATTCTAAAACTCAGTTACCACAACTTGTCGCCAGAAATGAAACAATGTTTTGCTTATTGCTCATTGTACCCCAAGGATTCAAAAATTCGAAAGGATGAGTTGATTCGGTTATGGATGGCACAGGGTTACCTTAAATGTTCAACCGAAAGACAGCAGATGGAGGATGTGGGTAATCAATTTGTAAAGATGTTTCTGATGAACTCATTTTTTCAAGATGCGAAACGTGCGGACGGTGAGATCATTAGCTTCAAAATGCACGATTTAATGCATGATCTTGCAATGCATGTTGCTGGCAATGATTATTGTTACTTGGATGGTAAGGCAGAAAAAGTTGAAGGTAGACCCATGCATGTATCATTGAAATACAATGCCATTCATTTGTTGAAATCATTAGATCCGAGCAGGCTGCGAACTTTGATTTTTCCGTATTGCTTCGAAGAAGAGGAATATTTGTCGGTTATTGCAAAGTTCAAATACTTACGTGTCTTGAAGTTGGATCATCTCTCTGATTCCACTGAACATTTGAAGCATTTAAGATACCTTGCTTTAACGCAACAAAGTCTTCCCAAATCCATGAGCAATCTTGTTTTCCTACAAACATTACAATTAAAGAAGTGCGACGAAGAATCATTTTCAGAAGTAGTCACAAAATTAGTCAATCTGAGGTGCCTTGATATCGATGATTATGACTCCTTGCGTGGGATGGCAATTGGGTTGGGAAAATTATGCTCTTTGCAATTTTTGTCGACCTTCGTTGTGGGAGACAGCCAAGAAACAAAATATGCCACATTAAATGAACTGAAGGACTTAAACCTAATAAGAGGCAAATTAGAAATTGTGCATCTGAATCGTGTGAGAGACGTGGCTCTGGAATCACACTACGTAAACTTAAAAGAAAAAAAATTCCTTCAATTCTTGACTCTGGATTGGTTGGATTATTTGTCGGATGATGATTGTTTGGATGAAGACATCGGTAACAGTGACAGCTTGCAATTATTGGAAAACCTTCAGCCCCACGGTAATCTTAAGCGATTGACGGTGAATCATTATCCAGGCGTGCTTTTCCCAAGCTGGCTTTCTCTCCTCACAAATGTTGTTAATATCCGTCTCTATCATCTTCCTAATTGTGGCTGTCTCCCACCGCTGGAACGTCTCCCGTCCCTGAAGTCCCTTGATATACGGTTTCTTCATGAATTGGAATATATATATCTCTGCGAAGATGGCTTTGCAGTAACCTTCTTCCCCTCTCTAGAGAGCCTCAGTTTAGAAGGTTGTCGGAATTTCAGGGGATGGCGGAGGCCGAGAGATGATATCAATGATTCACATAATCTCTCCTTACCTCTTTCATTTCCTCATCTTTCTCAACTATTTGTCTCGACATGTCCACAGTTGACTTGTATGCCTACTTTTCCAAACGTTAAGGATTTAAAATGGTACAAATGCAGTGCGGAGCCATTAATAGGAACACTAAACACAACAGCGTCAACATGTTCAGCTGACTCATCTTCCTCCGCTACCCCTCTTTCCATGCTCGAACGACTGTCAATTTCTGATCCTATGAATTTACCAAAGGGTTGGATGCAAAATCTGACTTCTCTCGAGTCTCTTCAAATTCAATTATGTGATAGTGAAACACTTGAAGAATTTGAAACTGGGTTTAAGGACGACACCAACTGCCTTCCTTCTCTGCGAAAAATCAGCATAAATTTTTGTGGAAGGCTAAAGGCTTTGCCAGATTGGATTTGCAACCTCTCATCGCTTCAGCATATCACAATCTCAAACTGCTCAAAACTGGCATCGCTGCCCGAAGGAATGAGTGGTCTTACCAATTTAAAGATCTTTGAGGTCTGGGGACCTTCCGTCTTACTTAATGAATGCCGAAGAAAGACAAGTGCCGTTAGTCGCCAAATCGCACACATCCCACAAATATTCCTTAGTTGA 3153 0.3968 MAESVPFAVNSNLRLASADFLEFGKHYEVTEELEELKNTIESINAKLLGADDKQDQDDGVRVWIRRFKKVLHATDDSLDDLAIQFRRDKLGAAEGKEVDKVLLSISSSNQLPLYTEMPDKIKEIRESFNGVVEDMDKLNLIPASLVKQTNSEWRETCSFVLESDIIGRDDSKKEIISLLGQTHENRKVSLIAIFGLGGLGKTTLAQLVYNDLEVQNCFEKKMWVCVSDNFDVKTVLKKILESVTRSKTADGSSLDYLQEKLRENLSGKKYLLVLDDIWNERRDKWIELRKYLMCGAQDSKILVTTRSENVAKAMSASTSYPLKGLTDEASWSLLKSIAFEDDFTEVNQNLESMGKEIAKKCKGVPLAVKTLGGLLGGQNEESEWENVLLGDFWKLCEKQNSIMPILKLSYHNLSPEMKQCFAYCSLYPKDSKIRKDELIRLWMAQGYLKCSTERQQMEDVGNQFVKMFLMNSFFQDAKRADGEIISFKMHDLMHDLAMHVAGNDYCYLDGKAEKVEGRPMHVSLKYNAIHLLKSLDPSRLRTLIFPYCFEEEEYLSVIAKFKYLRVLKLDHLSDSTEHLKHLRYLALTQQSLPKSMSNLVFLQTLQLKKCDEESFSEVVTKLVNLRCLDIDDYDSLRGMAIGLGKLCSLQFLSTFVVGDSQETKYATLNELKDLNLIRGKLEIVHLNRVRDVALESHYVNLKEKKFLQFLTLDWLDYLSDDDCLDEDIGNSDSLQLLENLQPHGNLKRLTVNHYPGVLFPSWLSLLTNVVNIRLYHLPNCGCLPPLERLPSLKSLDIRFLHELEYIYLCEDGFAVTFFPSLESLSLEGCRNFRGWRRPRDDINDSHNLSLPLSFPHLSQLFVSTCPQLTCMPTFPNVKDLKWYKCSAEPLIGTLNTTASTCSADSSSSATPLSMLERLSISDPMNLPKGWMQNLTSLESLQIQLCDSETLEEFETGFKDDTNCLPSLRKISINFCGRLKALPDWICNLSSLQHITISNCSKLASLPEGMSGLTNLKIFEVWGPSVLLNECRRKTSAVSRQIAHIPQIFLS* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0183 1050 Gene3D Ribonuclease Inhibitor 893 1037 IPR032675 -
Apr10g0183 1050 Pfam Rx N-terminal domain 22 96 IPR041118 -
Apr10g0183 1050 Gene3D - 13 122 - -
Apr10g0183 1050 Gene3D Ribonuclease Inhibitor 662 888 IPR032675 -
Apr10g0183 1050 SUPERFAMILY L domain-like 488 881 - -
Apr10g0183 1050 SUPERFAMILY RNI-like 851 1022 - -
Apr10g0183 1050 PANTHER OS05G0414200 PROTEIN 32 947 - -
Apr10g0183 1050 PANTHER DISEASE RESISTANCE PROTEIN RP 32 947 IPR044974 GO:0006952
Apr10g0183 1050 Gene3D - 149 320 IPR027417 -
Apr10g0183 1050 Pfam NB-ARC domain 169 412 IPR002182 GO:0043531
Apr10g0183 1050 Coils Coil 26 53 - -
Apr10g0183 1050 Gene3D - 324 409 IPR042197 -
Apr10g0183 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 424 IPR027417 -
Apr10g0183 1050 Gene3D - 410 500 IPR036388 -
Apr10g0183 1050 PRINTS Disease resistance protein signature 190 205 - -
Apr10g0183 1050 PRINTS Disease resistance protein signature 264 278 - -
Apr10g0183 1050 PRINTS Disease resistance protein signature 361 375 - -
Apr10g0183 1050 PRINTS Disease resistance protein signature 986 1002 - -
Apr10g0183 1050 Gene3D Ribonuclease Inhibitor 520 659 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0183 Apr-Chr10 4339785 4342937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0183 188 421 WRKY Transcription Factor Family AT5G45050 27.711 1.00e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0183 - - aprc:113850108 1434.47